Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C022330.2 Cucumis melo HOM05D026927 ORTHO05D008531 2.8e-87 325.5 193 100.0
CsaV3_6G008060 Cucumis sativus L. HOM05D026927 ORTHO05D008531 1.5e-69 266.5 189 78.3
ClCG06G002000 Citrullus lanatus HOM05D026927 ORTHO05D008531 5.2e-41 171.8 131 73.3
Sed0005097 Sechium edule HOM05D026927 ORTHO05D008531 5.9e-37 158.3 196 52.0
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 1.0e-12 77.8 213 35.2
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 3.0e-12 76.3 214 33.2
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 1.6e-10 70.5 119 42.0
MD16G1123500 Malus domestica HOM05D007269 ORTHO05D008531 1.6e-10 70.5 237 31.2
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 6.2e-10 68.6 149 34.9
CSS0011599 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 2.3e-09 66.6 193 35.2
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 3.1e-09 66.2 215 33.0
Manes.12G008000 Manihot esculenta HOM05D007269 ORTHO05D008531 8.9e-09 64.7 151 33.8
TAR622G0366 Trochodendron aralioides HOM05D007269 ORTHO05D008531 8.9e-09 64.7 136 34.6
Prupe.1G222200 Prunus persica HOM05D007269 ORTHO05D008531 1.2e-08 64.3 236 30.1
RcHm_v2.0_Chr4g0429751 Rosa chinensis HOM05D007269 ORTHO05D008531 2.0e-08 63.5 228 30.7
Thecc.02G201200 Theobroma cacao HOM05D007269 ORTHO05D008531 2.6e-08 63.2 240 29.6
CiPaw.06G105600 Carya illinoinensis HOM05D007269 ORTHO05D008531 1.3e-07 60.8 230 30.0
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 2.9e-07 59.7 155 35.5
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 1.1e-06 57.8 191 28.8
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.1e-06 57.8 129 35.7
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 1.1e-06 57.8 140 32.1
CiPaw.05G106700 Carya illinoinensis HOM05D007269 ORTHO05D008531 1.4e-06 57.4 245 27.3
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 1.4e-06 57.4 130 35.4
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.9e-06 57.0 205 28.3
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 1.9e-06 57.0 124 32.3
FvH4_4g23360 Fragaria vesca HOM05D007269 ORTHO05D008531 5.4e-06 55.5 244 27.5
FAN17G1902 Fragaria x ananassa HOM05D007269 ORTHO05D008531 5.4e-06 55.5 166 33.1
Sabra03G0123300 Salix brachista HOM05D007269 ORTHO05D008531 5.4e-06 55.5 161 29.2
Nitab4.5_0002530g0020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 7.1e-06 55.1 156 32.1
Solyc03g097430.1 Solanum lycopersicum HOM05D007269 ORTHO05D008531 7.1e-06 55.1 149 35.6
Cfa009391 Carpinus fangiana HOM05D007269 ORTHO05D008531 9.2e-06 54.7 155 30.3


User provided reference genes

Program Settings