Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C022199.2 Cucumis melo HOM05D008742 ORTHO05D010377 8.3e-157 557.0 279 100.0
CsaV3_5G040230 Cucumis sativus L. HOM05D008742 ORTHO05D010377 6.6e-138 494.2 280 89.6
ClCG08G000630 Citrullus lanatus HOM05D008742 ORTHO05D010377 7.9e-107 391.0 245 78.4
Sed0018339 Sechium edule HOM05D008742 ORTHO05D010377 1.3e-64 250.8 266 54.5
QL10p026828 Quercus lobata HOM05D008742 ORTHO05D010377 3.4e-49 199.5 288 42.4
CiPaw.03G017300 Carya illinoinensis HOM05D008742 ORTHO05D010377 1.1e-44 184.5 285 41.1
Cfa008115 Carpinus fangiana HOM05D008742 ORTHO05D010377 3.2e-44 183.0 277 41.5
TAR628G0950 Trochodendron aralioides HOM05D008742 ORTHO05D010377 5.5e-44 182.2 265 41.5
CANSAT25G0509 Cannabis sativa HOM05D008742 ORTHO05D010377 3.6e-43 179.5 298 39.6
Potri.013G102300 Populus trichocarpa HOM05D008742 ORTHO05D010377 3.1e-39 166.4 292 39.0
Aqoxy6G00073 Aquilegia oxysepala HOM05D008742 ORTHO05D010377 3.5e-38 162.9 288 35.4
PGR042G1068 Punica granatum HOM05D008742 ORTHO05D010377 1.2e-35 154.5 288 34.4
Manes.18G121000 Manihot esculenta HOM05D008742 ORTHO05D010377 1.2e-33 147.9 295 36.6
MBI03_g14517_MAGBIO Magnolia biondii HOM05D008742 ORTHO05D010377 9.8e-33 144.8 252 38.9
Eucgr.F02959 Eucalyptus grandis HOM05D008742 ORTHO05D010377 2.2e-32 143.7 283 37.5
Thecc.08G171700 Theobroma cacao HOM05D008742 ORTHO05D010377 3.7e-32 142.9 287 36.6
Ciclev10021221m.g Citrus clementina HOM05D008742 ORTHO05D010377 6.4e-32 142.1 317 33.8
Gohir.D13G122200 Gossypium hirsutum HOM05D008742 ORTHO05D010377 2.7e-30 136.7 263 35.7
Solyc11g031970.2 Solanum lycopersicum HOM05D008742 ORTHO05D010377 2.3e-29 133.7 224 39.7
MSTRG.25490 Avicennia marina HOM05D008742 ORTHO05D010377 3.0e-29 133.3 235 37.4
Gohir.A13G118401 Gossypium hirsutum HOM05D008742 ORTHO05D010377 1.9e-28 130.6 283 35.3
Gorai.013G136900 Gossypium raimondii HOM05D008742 ORTHO05D010377 2.5e-28 130.2 282 33.7
Sabra13G0088400 Salix brachista HOM05D008742 ORTHO05D010377 7.3e-28 128.6 343 30.3
PSO782G1932 Papaver somniferum HOM05D008742 ORTHO05D010377 4.7e-27 125.9 277 35.4
Nitab4.5_0001278g0110 Nicotiana tabacum HOM05D008742 ORTHO05D010377 2.3e-26 123.6 229 37.1
Sopen11g014500 Solanum pennellii HOM05D008742 ORTHO05D010377 2.3e-26 123.6 225 38.2
GSVIVG01025912001 Vitis vinifera HOM05D008742 ORTHO05D010377 5.2e-26 122.5 233 38.2
PSO170G1705 Papaver somniferum HOM05D008742 ORTHO05D010377 6.8e-26 122.1 281 33.8
PGSC0003DMG400031182 Solanum tuberosum HOM05D008742 ORTHO05D010377 8.9e-26 121.7 238 37.8
Nitab4.5_0001359g0010 Nicotiana tabacum HOM05D008742 ORTHO05D010377 9.8e-25 118.2 268 34.0
Peaxi162Scf00688g00019 Petunia axillaris HOM05D008742 ORTHO05D010377 8.3e-24 115.2 212 39.6
SalBow7G3290 Salvia bowleyana HOM05D008742 ORTHO05D010377 9.2e-23 111.7 254 32.7
TWI59G0981 Tripterygium wilfordii HOM05D008742 ORTHO05D010377 1.7e-21 107.5 130 45.4
Haze_13917 Corylus avellana HOM05D008742 ORTHO05D010377 3.9e-21 106.3 107 52.3
Migut.C01345 Erythranthe guttata HOM05D008742 ORTHO05D010377 1.5e-20 104.4 241 32.8
ATR1136G217 Amborella trichopoda HOM05D008742 ORTHO05D010377 6.8e-18 95.5 223 31.8
Duzib177G0721 Durio zibethinus HOM05D008742 ORTHO05D010377 1.5e-17 94.4 93 49.5
Cpa.g.sc21.53 Carica papaya HOM05D008742 ORTHO05D010377 1.9e-15 87.4 207 32.9
CDE07G1611 Ceratophyllum demersum HOM05D008742 ORTHO05D010377 9.5e-12 75.1 116 35.3
Cc10_g16420 Coffea canephora HOM05D008742 ORTHO05D010377 1.1e-10 71.6 189 32.8
THA.LOC104815909 Tarenaya hassleriana HOM05D012304 ORTHO05D010377 4.0e-10 69.7 269 24.9
SGA_v2.0_scaffold24G10618 Striga asiatica HOM05D000065 ORTHO05D000162 3.2e-07 60.1 129 33.3
Carub.0006s2851 Capsella rubella HOM05D012304 ORTHO05D010377 1.2e-06 58.2 234 24.4
Dinv41793 Davidia involucrata HOM05D008742 ORTHO05D010377 6.0e-06 55.8 144 31.9


User provided reference genes

Program Settings