Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C022112.2 Cucumis melo HOM05D007581 ORTHO05D009250 1.2e-55 219.9 145 100.0
CsaV3_5G039340 Cucumis sativus L. HOM05D007581 ORTHO05D009250 6.8e-54 214.2 145 97.9
ClCG08G001940 Citrullus lanatus HOM05D007581 ORTHO05D009250 5.2e-46 188.0 145 89.0
Sed0022412 Sechium edule HOM05D007581 ORTHO05D009250 4.5e-37 158.3 145 82.1
Medtr6g060172 Medicago truncatula HOM05D007581 ORTHO05D009250 3.1e-30 135.6 135 71.9
Glyma.16G205300 Glycine max HOM05D007581 ORTHO05D009250 9.0e-30 134.0 134 69.4
Phvul.004G128300 Phaseolus vulgaris HOM05D007581 ORTHO05D009250 1.3e-28 130.2 134 64.9
CSS0015328 Camellia sinensis var. sinensis HOM05D007581 ORTHO05D009250 1.7e-28 129.8 138 61.6
Prupe.8G001100 Prunus persica HOM05D007581 ORTHO05D009250 1.7e-28 129.8 152 65.1
Potri.019G063300 Populus trichocarpa HOM05D007581 ORTHO05D009250 2.2e-28 129.4 140 67.9
Eucgr.F04100 Eucalyptus grandis HOM05D007581 ORTHO05D009250 3.8e-28 128.6 148 69.6
Glyma.09G154800 Glycine max HOM05D007581 ORTHO05D009250 6.4e-28 127.9 134 73.1
MD00G1103300 Malus domestica HOM05D007581 ORTHO05D009250 1.4e-27 126.7 146 65.8
Manes.15G183800 Manihot esculenta HOM05D007581 ORTHO05D009250 3.2e-27 125.6 138 68.1
CANSAT25G1375 Cannabis sativa HOM05D007581 ORTHO05D009250 3.5e-26 122.1 141 69.5
CANSAT25G2017 Cannabis sativa HOM05D007581 ORTHO05D009250 3.5e-26 122.1 141 69.5
Nitab4.5_0006526g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 7.9e-26 120.9 139 56.8
ECA247G3877 Erigeron canadensis HOM05D007581 ORTHO05D009250 3.9e-25 118.6 141 58.9
Peaxi162Scf00078g01222 Petunia axillaris HOM05D007581 ORTHO05D009250 3.9e-25 118.6 140 55.0
Nitab4.5_0000079g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 5.1e-25 118.2 139 56.8
SGA_v2.0_scaffold118G32651 Striga asiatica HOM05D007581 ORTHO05D009250 8.7e-25 117.5 131 60.3
Atru.chr13.2628 Acer truncatum HOM05D007581 ORTHO05D009250 1.5e-24 116.7 142 64.1
Haze_14032 Corylus avellana HOM05D007581 ORTHO05D009250 1.5e-24 116.7 135 68.1
PSO210G2853 Papaver somniferum HOM05D007581 ORTHO05D009250 1.5e-24 116.7 142 67.6
FAN19G1324 Fragaria x ananassa HOM05D007581 ORTHO05D009250 3.3e-24 115.5 140 57.1
Sabra19G0076500 Salix brachista HOM05D007581 ORTHO05D009250 3.3e-24 115.5 140 66.4
Sabra19G0080300 Salix brachista HOM05D007581 ORTHO05D009250 3.3e-24 115.5 140 66.4
Migut.C01409 Erythranthe guttata HOM05D007581 ORTHO05D009250 5.6e-24 114.8 143 68.5
Aqoxy6G00030 Aquilegia oxysepala HOM05D007581 ORTHO05D009250 1.6e-23 113.2 138 58.0
CAN.G630.61 Capsicum annuum HOM05D007581 ORTHO05D009250 2.1e-23 112.8 133 57.9
Ca_02136_v3 Cicer arietinum L. HOM05D007581 ORTHO05D009250 2.1e-23 112.8 134 69.4
GSVIVG01037110001 Vitis vinifera HOM05D007581 ORTHO05D009250 4.8e-23 111.7 141 56.0
CiPaw.04G007300 Carya illinoinensis HOM05D007581 ORTHO05D009250 6.2e-23 111.3 133 66.9
Dinv37395 Davidia involucrata HOM05D007581 ORTHO05D009250 8.2e-23 110.9 136 64.0
Lsat_1_v5_gn_1_24761 Lactuca sativa HOM05D007581 ORTHO05D009250 1.1e-22 110.5 135 65.9
QL09p000889 Quercus lobata HOM05D007581 ORTHO05D009250 1.1e-22 110.5 128 71.9
Lalb_Chr01g0008751 Lupinus albus HOM05D007581 ORTHO05D009250 1.8e-22 109.8 130 71.5
TAR628G1203 Trochodendron aralioides HOM05D007581 ORTHO05D009250 4.0e-22 108.6 141 67.4
EL10Ac1g01297 Beta vulgaris HOM05D007581 ORTHO05D009250 1.2e-21 107.1 141 59.6
Gohir.D08G248900 Gossypium hirsutum HOM05D007581 ORTHO05D009250 2.0e-21 106.3 132 61.4
Gorai.004G265500 Gossypium raimondii HOM05D007581 ORTHO05D009250 2.0e-21 106.3 132 67.4
MBI06_g43033_MAGBIO Magnolia biondii HOM05D007581 ORTHO05D009250 2.0e-21 106.3 134 65.7
FvH4_2g00130 Fragaria vesca HOM05D007581 ORTHO05D009250 5.8e-21 104.8 140 60.0
FAN24G1736 Fragaria x ananassa HOM05D007581 ORTHO05D009250 5.8e-21 104.8 140 60.0
Sc26g0002080 Simmondsia chinensis HOM05D007581 ORTHO05D009250 7.6e-21 104.4 136 59.6
Sopen11g004800 Solanum pennellii HOM05D007581 ORTHO05D009250 1.0e-20 104.0 140 53.6
PGSC0003DMG400016228 Solanum tuberosum HOM05D007581 ORTHO05D009250 1.0e-20 104.0 140 53.6
Gohir.A08G228600 Gossypium hirsutum HOM05D007581 ORTHO05D009250 1.7e-20 103.2 132 66.7
Lj2g0009073 Lotus japonicus HOM05D007581 ORTHO05D009250 1.7e-20 103.2 131 61.1
Carub.0006s2893 Capsella rubella HOM05D007581 ORTHO05D009250 2.2e-20 102.8 135 63.0
BcaB05g23909 Brassica carinata HOM05D007581 ORTHO05D009250 4.9e-20 101.7 140 57.9
Nn5g27166 Nelumbo nucifera HOM05D007581 ORTHO05D009250 4.9e-20 101.7 133 66.2
MSTRG.25512 Avicennia marina HOM05D007581 ORTHO05D009250 1.4e-19 100.1 140 65.0
AT4G10330 Arabidopsis thaliana HOM05D007581 ORTHO05D009250 2.5e-19 99.4 138 53.6
Hund16921 Selenicereus undatus HOM05D007581 ORTHO05D009250 3.2e-19 99.0 141 66.0
Aa31LG9G11680 Aethionema arabicum HOM05D007581 ORTHO05D009250 4.2e-19 98.6 138 55.8
Cc10_g16220 Coffea canephora HOM05D007581 ORTHO05D009250 4.2e-19 98.6 128 63.3
RcHm_v2.0_Chr6g0249391 Rosa chinensis HOM05D007581 ORTHO05D009250 4.2e-19 98.6 137 64.2
Solyc11g009030.1 Solanum lycopersicum HOM05D007581 ORTHO05D009250 7.1e-19 97.8 140 51.4
Lalb_Chr02g0149891 Lupinus albus HOM05D007581 ORTHO05D009250 1.2e-18 97.1 142 59.2
Psat1g111920 Pisum sativum HOM05D007581 ORTHO05D009250 3.5e-18 95.5 119 65.5
TWI18G0093 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 7.9e-18 94.4 130 56.2
HPP92_009197 Vanilla planifolia HOM05D007581 ORTHO05D009250 7.9e-18 94.4 127 64.6
TPR.G20128 Trifolium pratense HOM05D007581 ORTHO05D009250 1.3e-17 93.6 130 64.6
CARHR256310 Cardamine hirsuta HOM05D007581 ORTHO05D009250 1.8e-17 93.2 138 59.4
Os01g0886500 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 1.8e-17 93.2 124 53.2
Sp6g07100 Schrenkiella parvula HOM05D007581 ORTHO05D009250 3.9e-17 92.0 141 54.6
AL6G44200 Arabidopsis lyrata HOM05D007581 ORTHO05D009250 6.7e-17 91.3 135 59.3
Duzib116G0131 Durio zibethinus HOM05D007581 ORTHO05D009250 6.7e-17 91.3 153 49.7
ATR1089G122 Amborella trichopoda HOM05D007581 ORTHO05D009250 8.7e-17 90.9 137 61.3
BolC2t10277H Brassica oleracea HOM05D007581 ORTHO05D009250 1.1e-16 90.5 140 54.3
BcaC03g16403 Brassica carinata HOM05D007581 ORTHO05D009250 1.9e-16 89.7 140 57.1
A02p26660 Brassica napus HOM05D007581 ORTHO05D009250 1.9e-16 89.7 140 57.1
C02p42350 Brassica napus HOM05D007581 ORTHO05D009250 1.9e-16 89.7 140 57.1
BraA02t07670Z Brassica rapa HOM05D007581 ORTHO05D009250 1.9e-16 89.7 140 57.1
Ciclev10022815m.g Citrus clementina HOM05D007581 ORTHO05D009250 1.9e-16 89.7 141 61.7
THA.LOC104815611 Tarenaya hassleriana HOM05D007581 ORTHO05D009250 1.9e-16 89.7 137 60.6
Thhalv10029062m.g Eutrema salsugineum HOM05D007581 ORTHO05D009250 3.3e-16 89.0 140 50.7
DCAR_014049 Daucus carota HOM05D000133 ORTHO05D000259 2.4e-14 82.8 162 45.1
Zm00001eb145430 Zea mays HOM05D007581 ORTHO05D009250 3.1e-14 82.4 133 59.4
Os11g0242700 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 4.1e-14 82.0 131 59.5
Oeu028611.1 Olea europaea HOM05D007581 ORTHO05D009250 5.9e-13 78.2 101 71.3
MD05G1000400 Malus domestica HOM05D007581 ORTHO05D009250 7.7e-13 77.8 112 57.1
Cpa.g.sc21.238 Carica papaya HOM05D007581 ORTHO05D009250 1.3e-12 77.0 84 67.9
AUR62013400 Chenopodium quinoa HOM05D007581 ORTHO05D009250 3.8e-12 75.5 173 48.0
PSO761G0508 Papaver somniferum HOM05D007581 ORTHO05D009250 1.4e-11 73.6 96 69.8
Zm00001eb168090 Zea mays HOM05D007581 ORTHO05D009250 2.5e-11 72.8 131 56.5
unitig_578.g16109 Utricularia gibba HOM05D007581 ORTHO05D009250 3.2e-11 72.4 136 55.9
COL.COLO4_25109 Corchorus olitorius HOM05D007581 ORTHO05D009250 2.7e-10 69.3 106 67.0
HanXRQChr04g0102981 Helianthus annuus HOM05D007581 ORTHO05D009250 2.7e-10 69.3 95 72.6
VMungo0464G1076 Vigna mungo HOM05D007581 ORTHO05D009250 2.3e-09 66.2 122 47.5
MD02G1202800 Malus domestica HOM05D007581 ORTHO05D009250 1.5e-08 63.5 99 48.5
Mapoly0034s0024 Marchantia polymorpha HOM05D020710 ORTHO05D009250 1.7e-07 60.1 135 53.3
QL09p000872 Quercus lobata HOM05D007581 ORTHO05D009250 3.7e-07 58.9 97 71.1
Cfa008025 Carpinus fangiana HOM05D007581 ORTHO05D009250 4.8e-07 58.5 32 78.1
Dinv25473 Davidia involucrata HOM05D007581 ORTHO05D009250 1.8e-06 56.6 59 44.1
TWI75G0477 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 3.1e-06 55.8 99 63.6


User provided reference genes

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