Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C022064.2 Cucumis melo HOM05D000926 ORTHO05D000707 7.2e-47 190.3 99 100.0
ClCG11G005090 Citrullus lanatus HOM05D000926 ORTHO05D000707 5.6e-23 110.9 93 68.8
Sed0026154 Sechium edule HOM05D000926 ORTHO05D000707 1.2e-12 76.6 92 52.2
CiPaw.03G080200 Carya illinoinensis HOM05D000926 ORTHO05D000707 3.7e-11 71.6 79 54.4
Phvul.008G023400 Phaseolus vulgaris HOM05D000926 ORTHO05D000707 3.7e-11 71.6 81 46.9
Lj1g0009060 Lotus japonicus HOM05D000926 ORTHO05D000707 8.3e-11 70.5 78 48.7
Lalb_Chr10g0092481 Lupinus albus HOM05D000926 ORTHO05D000707 8.3e-11 70.5 80 50.0
Glyma.08G254800 Glycine max HOM05D000926 ORTHO05D000707 1.4e-10 69.7 81 48.1
Medtr0542s0020 Medicago truncatula HOM05D000926 ORTHO05D000707 1.9e-10 69.3 79 44.3
Cfa007729 Carpinus fangiana HOM05D000926 ORTHO05D000707 2.4e-10 68.9 85 42.4
MELO3C018921.2 Cucumis melo HOM05D000926 ORTHO05D000707 3.2e-10 68.6 84 47.6
Hma1.2p1_0588F.1_g184550 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 4.1e-10 68.2 81 48.1
Cfa007730 Carpinus fangiana HOM05D000926 ORTHO05D000707 9.2e-10 67.0 86 43.0
MD09G1078800 Malus domestica HOM05D000926 ORTHO05D000707 9.2e-10 67.0 85 47.1
TPR.G3253 Trifolium pratense HOM05D000926 ORTHO05D000707 9.2e-10 67.0 79 46.8
Dinv34883 Davidia involucrata HOM05D000926 ORTHO05D000707 1.2e-09 66.6 79 44.3
Duzib138G1671 Durio zibethinus HOM05D000926 ORTHO05D000707 1.2e-09 66.6 85 44.7
Glyma.18G277600 Glycine max HOM05D000926 ORTHO05D000707 1.2e-09 66.6 78 46.2
Manes.02G062400 Manihot esculenta HOM05D000926 ORTHO05D000707 1.2e-09 66.6 76 46.1
CiPaw.03G080100 Carya illinoinensis HOM05D000926 ORTHO05D000707 1.6e-09 66.2 83 49.4
Psat3g193960 Pisum sativum HOM05D000926 ORTHO05D000707 1.6e-09 66.2 79 44.3
Rhsim08G0078900 Rhododendron simsii HOM05D000926 ORTHO05D000707 2.1e-09 65.9 79 46.8
TAR629G1973 Trochodendron aralioides HOM05D000926 ORTHO05D000707 2.1e-09 65.9 76 52.6
Nitab4.5_0002171g0020 Nicotiana tabacum HOM05D000926 ORTHO05D000707 3.5e-09 65.1 75 45.3
DCAR_026290 Daucus carota HOM05D000926 ORTHO05D000707 4.6e-09 64.7 79 45.6
Eucgr.J01437 Eucalyptus grandis HOM05D000926 ORTHO05D000707 4.6e-09 64.7 85 41.2
Eucgr.J01438 Eucalyptus grandis HOM05D000926 ORTHO05D000707 4.6e-09 64.7 85 45.9
TAR374G1048 Trochodendron aralioides HOM05D000926 ORTHO05D000707 6.0e-09 64.3 80 45.0
MSTRG.2959 Avicennia marina HOM05D000926 ORTHO05D000707 7.8e-09 63.9 85 42.4
PGSC0003DMG400001479 Solanum tuberosum HOM05D000926 ORTHO05D000707 7.8e-09 63.9 85 42.4
PGSC0003DMG400029541 Solanum tuberosum HOM05D000926 ORTHO05D000707 7.8e-09 63.9 85 42.4
Duzib211G0100 Durio zibethinus HOM05D000926 ORTHO05D000707 1.0e-08 63.5 84 42.9
Hma1.2p1_0588F.1_g184540 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 1.0e-08 63.5 86 41.9
Manes.02G062600 Manihot esculenta HOM05D000926 ORTHO05D000707 1.0e-08 63.5 80 41.2
RcHm_v2.0_Chr2g0164101 Rosa chinensis HOM05D000926 ORTHO05D000707 1.0e-08 63.5 91 40.7
Thecc.04G113000 Theobroma cacao HOM05D000926 ORTHO05D000707 1.0e-08 63.5 77 44.2
Aqoxy3G03797 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 1.3e-08 63.2 84 47.6
ClCG07G016190 Citrullus lanatus HOM05D000926 ORTHO05D000707 1.3e-08 63.2 84 45.2
Eucgr.J01435 Eucalyptus grandis HOM05D000926 ORTHO05D000707 1.3e-08 63.2 85 41.2
RcHm_v2.0_Chr2g0164151 Rosa chinensis HOM05D000926 ORTHO05D000707 1.3e-08 63.2 81 49.4
Sabra04G0074000 Salix brachista HOM05D000926 ORTHO05D000707 1.3e-08 63.2 76 47.4
Nn4g23604 Nelumbo nucifera HOM05D000926 ORTHO05D000707 2.3e-08 62.4 78 46.2
Psat3g193320 Pisum sativum HOM05D000926 ORTHO05D000707 2.3e-08 62.4 75 38.7
Cfa007731 Carpinus fangiana HOM05D000926 ORTHO05D000707 3.0e-08 62.0 78 47.4
Nitab4.5_0005612g0030 Nicotiana tabacum HOM05D000926 ORTHO05D000707 3.0e-08 62.0 75 50.7
Nitab4.5_0013205g0010 Nicotiana tabacum HOM05D000926 ORTHO05D000707 3.0e-08 62.0 76 46.1
Thecc.04G112900 Theobroma cacao HOM05D000926 ORTHO05D000707 3.0e-08 62.0 79 43.0
Haze_14349 Corylus avellana HOM05D000926 ORTHO05D000707 3.9e-08 61.6 80 47.5
Lalb_Chr21g0318771 Lupinus albus HOM05D000926 ORTHO05D000707 3.9e-08 61.6 78 39.7
MD17G1069100 Malus domestica HOM05D000926 ORTHO05D000707 3.9e-08 61.6 85 44.7
Solyc02g089480.1 Solanum lycopersicum HOM05D000926 ORTHO05D000707 3.9e-08 61.6 85 41.2
Sopen02g034220 Solanum pennellii HOM05D000926 ORTHO05D000707 3.9e-08 61.6 85 41.2
ATR0691G108 Amborella trichopoda HOM05D000926 ORTHO05D000707 5.1e-08 61.2 80 46.2
Aqoxy3G00596 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 5.1e-08 61.2 77 45.5
AUR62023127 Chenopodium quinoa HOM05D000926 ORTHO05D000707 5.1e-08 61.2 88 44.3
FvH4_6g45911 Fragaria vesca HOM05D000926 ORTHO05D000707 5.1e-08 61.2 77 49.4
FAN05G2016 Fragaria x ananassa HOM05D000926 ORTHO05D000707 5.1e-08 61.2 77 48.1
Gohir.D07G185000 Gossypium hirsutum HOM05D000926 ORTHO05D000707 5.1e-08 61.2 84 44.0
Gorai.001G205500 Gossypium raimondii HOM05D000926 ORTHO05D000707 5.1e-08 61.2 84 44.0
Lju361C12T10 Lonicera japonica HOM05D000926 ORTHO05D000707 5.1e-08 61.2 76 43.4
Medtr7g018090 Medicago truncatula HOM05D000926 ORTHO05D000707 5.1e-08 61.2 76 46.1
DCAR_010990 Daucus carota HOM05D000926 ORTHO05D000707 6.6e-08 60.8 78 46.2
Oeu032854.1 Olea europaea HOM05D000926 ORTHO05D000707 6.6e-08 60.8 77 45.5
Potri.004G108800 Populus trichocarpa HOM05D000926 ORTHO05D000707 6.6e-08 60.8 85 44.7
EL10Ac2g04400 Beta vulgaris HOM05D000926 ORTHO05D000707 8.6e-08 60.5 80 41.2
Lalb_Chr10g0092471 Lupinus albus HOM05D000926 ORTHO05D000707 8.6e-08 60.5 74 47.3
HPP92_005300 Vanilla planifolia HOM05D000926 ORTHO05D000707 8.6e-08 60.5 90 37.8
Aqoxy7G02467 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 1.1e-07 60.1 86 46.5
EL10Ac8g18258 Beta vulgaris HOM05D000926 ORTHO05D000707 1.1e-07 60.1 96 38.5
AUR62009441 Chenopodium quinoa HOM05D000926 ORTHO05D000707 1.1e-07 60.1 88 39.8
Gohir.A07G178200 Gossypium hirsutum HOM05D000926 ORTHO05D000707 1.1e-07 60.1 82 40.2
MD17G1069200 Malus domestica HOM05D000926 ORTHO05D000707 1.1e-07 60.1 87 42.5
Eucgr.C04021 Eucalyptus grandis HOM05D000926 ORTHO05D000707 1.5e-07 59.7 83 43.4
Nn3g17603 Nelumbo nucifera HOM05D000926 ORTHO05D000707 1.5e-07 59.7 80 41.2
GSVIVG01036505001 Vitis vinifera HOM05D000926 ORTHO05D000707 1.5e-07 59.7 78 44.9
Duzib133G0632 Durio zibethinus HOM05D000926 ORTHO05D000707 1.9e-07 59.3 73 46.6
PGSC0003DMG400001477 Solanum tuberosum HOM05D000926 ORTHO05D000707 1.9e-07 59.3 84 41.7
Aqoxy3G03796 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 2.5e-07 58.9 84 45.2
Eucgr.J01439 Eucalyptus grandis HOM05D000926 ORTHO05D000707 2.5e-07 58.9 94 42.6
PGR004G2735 Punica granatum HOM05D000926 ORTHO05D000707 2.5e-07 58.9 93 40.9
QL02p063891 Quercus lobata HOM05D000926 ORTHO05D000707 2.5e-07 58.9 90 45.6
Sopen02g034200 Solanum pennellii HOM05D000926 ORTHO05D000707 2.5e-07 58.9 84 40.5
Actinidia26283 Actinidia chinensis HOM05D000926 ORTHO05D000707 3.3e-07 58.5 80 42.5
ECA232G3566 Erigeron canadensis HOM05D000926 ORTHO05D000707 3.3e-07 58.5 90 36.7
FAN05G2979 Fragaria x ananassa HOM05D000926 ORTHO05D000707 3.3e-07 58.5 79 45.6
Gohir.D06G106200 Gossypium hirsutum HOM05D000926 ORTHO05D000707 3.3e-07 58.5 85 40.0
AUR62023120 Chenopodium quinoa HOM05D000926 ORTHO05D000707 4.3e-07 58.2 82 42.7
Hma1.2p1_2231F.1_g317580 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 4.3e-07 58.2 85 40.0
Sabra17G0090200 Salix brachista HOM05D000926 ORTHO05D000707 4.3e-07 58.2 78 46.2
SalBow1G1369 Salvia bowleyana HOM05D000926 ORTHO05D000707 4.3e-07 58.2 79 40.5
Solyc02g089460.1 Solanum lycopersicum HOM05D000926 ORTHO05D000707 4.3e-07 58.2 84 39.3
TPR.G38908 Trifolium pratense HOM05D000926 ORTHO05D000707 4.3e-07 58.2 82 43.9
MSTRG.3384 Avicennia marina HOM05D000926 ORTHO05D000707 5.6e-07 57.8 85 44.7
Cpa.g.sc70.7 Carica papaya HOM05D000926 ORTHO05D000707 5.6e-07 57.8 81 40.7
AUR62009442 Chenopodium quinoa HOM05D000926 ORTHO05D000368 5.6e-07 57.8 80 40.0
Ca_13080_v3 Cicer arietinum L. HOM05D000926 ORTHO05D000707 5.6e-07 57.8 83 39.8
Ciclev10013138m.g Citrus clementina HOM05D000926 ORTHO05D000707 5.6e-07 57.8 78 42.3
Eucgr.J01436 Eucalyptus grandis HOM05D000926 ORTHO05D000707 5.6e-07 57.8 78 42.3
Gorai.010G120700 Gossypium raimondii HOM05D000926 ORTHO05D000707 5.6e-07 57.8 85 40.0
Lsat_1_v5_gn_4_174621 Lactuca sativa HOM05D000926 ORTHO05D000707 5.6e-07 57.8 90 41.1
Oeu032853.1 Olea europaea HOM05D000926 ORTHO05D000707 5.6e-07 57.8 76 44.7
RcHm_v2.0_Chr7g0208061 Rosa chinensis HOM05D000926 ORTHO05D000707 5.6e-07 57.8 77 40.3
A06p35710 Brassica napus HOM05D000926 ORTHO05D000707 7.3e-07 57.4 80 43.8
BraA06t26495Z Brassica rapa HOM05D000926 ORTHO05D000707 7.3e-07 57.4 80 43.8
DCAR_002020 Daucus carota HOM05D000926 ORTHO05D000707 7.3e-07 57.4 76 43.4
Migut.K00874 Erythranthe guttata HOM05D000926 ORTHO05D000707 7.3e-07 57.4 76 44.7
MD09G1078900 Malus domestica HOM05D000926 ORTHO05D000707 7.3e-07 57.4 80 41.2
Oeu049341.1 Olea europaea HOM05D000926 ORTHO05D000707 7.3e-07 57.4 76 47.4
Prupe.3G245400 Prunus persica HOM05D000926 ORTHO05D000707 7.3e-07 57.4 80 41.2
Sabra04G0073800 Salix brachista HOM05D000926 ORTHO05D000707 7.3e-07 57.4 86 39.5
Sabra17G0090100 Salix brachista HOM05D000926 ORTHO05D000707 7.3e-07 57.4 76 43.4
Sed0018092 Sechium edule HOM05D000926 ORTHO05D000707 7.3e-07 57.4 80 41.2
Sc10g0000430 Simmondsia chinensis HOM05D000926 ORTHO05D000707 7.3e-07 57.4 78 42.3
PGSC0003DMG400001476 Solanum tuberosum HOM05D000926 ORTHO05D000707 7.3e-07 57.4 86 40.7
BcaNung05642 Brassica carinata HOM05D000926 ORTHO05D000707 9.5e-07 57.0 80 43.8
C07p42830 Brassica napus HOM05D000926 ORTHO05D000707 9.5e-07 57.0 80 43.8
BolC7t44811H Brassica oleracea HOM05D000926 ORTHO05D000707 9.5e-07 57.0 80 43.8
HanXRQChr06g0179161 Helianthus annuus HOM05D000926 ORTHO05D000707 9.5e-07 57.0 87 39.1
HanXRQChr09g0263311 Helianthus annuus HOM05D000926 ORTHO05D000707 9.5e-07 57.0 81 39.5
Manes.01G105900 Manihot esculenta HOM05D000926 ORTHO05D000707 9.5e-07 57.0 76 47.4
Peaxi162Scf00020g00201 Petunia axillaris HOM05D000926 ORTHO05D000707 9.5e-07 57.0 90 36.7
Phvul.001G043500 Phaseolus vulgaris HOM05D000926 ORTHO05D000707 9.5e-07 57.0 96 35.4
Potri.004G108440 Populus trichocarpa HOM05D000926 ORTHO05D000707 9.5e-07 57.0 79 46.8
Aa31sc359G10 Aethionema arabicum HOM05D000926 ORTHO05D000707 1.2e-06 56.6 77 39.0
AL6G36590 Arabidopsis lyrata HOM05D000926 ORTHO05D000707 1.2e-06 56.6 77 44.2
MELO3C018927.2 Cucumis melo HOM05D000926 ORTHO05D000707 1.2e-06 56.6 81 42.0
Prupe.3G245300 Prunus persica HOM05D000926 ORTHO05D000707 1.2e-06 56.6 81 39.5
Ah.16g100760 Amaranthus hybridus HOM05D000926 ORTHO05D000707 1.6e-06 56.2 84 44.0
MBI15_g03197_MAGBIO Magnolia biondii HOM05D000926 ORTHO05D000707 1.6e-06 56.2 91 38.5
Medtr1g013430 Medicago truncatula HOM05D000926 ORTHO05D000707 1.6e-06 56.2 87 41.4
VMungo0647G0297 Vigna mungo HOM05D000926 ORTHO05D000707 1.6e-06 56.2 88 39.8
Aa31LG9G16890 Aethionema arabicum HOM05D000926 ORTHO05D000707 2.1e-06 55.8 79 43.0
AT5G24920 Arabidopsis thaliana HOM05D000926 ORTHO05D000707 2.1e-06 55.8 77 42.9
CSS0017323 Camellia sinensis var. sinensis HOM05D000926 ORTHO05D000707 2.1e-06 55.8 85 38.8
CANSAT64G0443 Cannabis sativa HOM05D000926 ORTHO05D000707 2.1e-06 55.8 95 41.1
DCAR_002021 Daucus carota HOM05D000926 ORTHO05D000707 2.1e-06 55.8 78 43.6
Medtr1g013410 Medicago truncatula HOM05D000926 ORTHO05D000707 2.1e-06 55.8 81 42.0
Psat0s1897g0040 Pisum sativum HOM05D000926 ORTHO05D000707 2.1e-06 55.8 80 42.5
Potri.017G107300 Populus trichocarpa HOM05D000926 ORTHO05D000707 2.1e-06 55.8 77 42.9
SalBow1G7500 Salvia bowleyana HOM05D000926 ORTHO05D000707 2.1e-06 55.8 76 43.4
THA.LOC109116337 Tarenaya hassleriana HOM05D000926 ORTHO05D000707 2.1e-06 55.8 79 44.3
CAN.G93.43 Capsicum annuum HOM05D000926 ORTHO05D000707 2.8e-06 55.5 80 45.0
AUR62023119 Chenopodium quinoa HOM05D000926 ORTHO05D000707 2.8e-06 55.5 84 35.7
Cc07_g04740 Coffea canephora HOM05D000926 ORTHO05D000707 2.8e-06 55.5 86 43.0
RcHm_v2.0_Chr5g0067181 Rosa chinensis HOM05D000926 ORTHO05D000707 2.8e-06 55.5 78 38.5
Sp2g22530 Schrenkiella parvula HOM05D000926 ORTHO05D000707 2.8e-06 55.5 77 42.9
arahy.Tifrunner.gnm1.ann1.DUC516 Arachis hypogaea HOM05D000926 ORTHO05D000707 3.6e-06 55.1 83 39.8
A01p17000 Brassica napus HOM05D000926 ORTHO05D000707 3.6e-06 55.1 83 41.0
BraA01t01656Z Brassica rapa HOM05D000926 ORTHO05D000707 3.6e-06 55.1 83 41.0
DCAR_007536 Daucus carota HOM05D000926 ORTHO05D000707 3.6e-06 55.1 89 39.3
DCAR_007538 Daucus carota HOM05D000926 ORTHO05D000707 3.6e-06 55.1 89 39.3
HanXRQChr05g0136711 Helianthus annuus HOM05D000926 ORTHO05D000707 3.6e-06 55.1 88 38.6
Manes.01G105800 Manihot esculenta HOM05D000926 ORTHO05D000707 3.6e-06 55.1 87 42.5
AT2G24762 Arabidopsis thaliana HOM05D000926 ORTHO05D000707 4.7e-06 54.7 80 42.5
CsaV3_2G032650 Cucumis sativus L. HOM05D000926 ORTHO05D000707 4.7e-06 54.7 93 39.8
ECA236G4338 Erigeron canadensis HOM05D000926 ORTHO05D000707 4.7e-06 54.7 90 36.7
Lsat_1_v5_gn_5_86620 Lactuca sativa HOM05D000926 ORTHO05D000707 4.7e-06 54.7 85 41.2
PGR042G1069 Punica granatum HOM05D000926 ORTHO05D000707 4.7e-06 54.7 77 42.9
Rhsim07G0168600 Rhododendron simsii HOM05D000926 ORTHO05D000707 4.7e-06 54.7 81 40.7
Sp7g23790 Schrenkiella parvula HOM05D000926 ORTHO05D000707 4.7e-06 54.7 85 38.8
HPP92_017153 Vanilla planifolia HOM05D000926 ORTHO05D000707 4.7e-06 54.7 81 43.2
Aa31LG2G18610 Aethionema arabicum HOM05D000926 ORTHO05D000707 6.2e-06 54.3 85 43.5
Ah.12g060490 Amaranthus hybridus HOM05D000926 ORTHO05D000707 6.2e-06 54.3 87 41.4
BcaNung04116 Brassica carinata HOM05D000926 ORTHO05D000707 6.2e-06 54.3 83 39.8
Gohir.A06G104200 Gossypium hirsutum HOM05D000926 ORTHO05D000707 6.2e-06 54.3 77 39.0
Lsat_1_v5_gn_3_95661 Lactuca sativa HOM05D000926 ORTHO05D000707 6.2e-06 54.3 77 42.9
Potri.004G108680 Populus trichocarpa HOM05D000926 ORTHO05D000707 6.2e-06 54.3 76 42.1
BcaC09g50748 Brassica carinata HOM05D000926 ORTHO05D000707 8.1e-06 53.9 83 39.8
A09p56130 Brassica napus HOM05D000926 ORTHO05D000707 8.1e-06 53.9 83 39.8
C01p21320 Brassica napus HOM05D000926 ORTHO05D000707 8.1e-06 53.9 83 39.8
BolC1t02055H Brassica oleracea HOM05D000926 ORTHO05D000707 8.1e-06 53.9 83 39.8
BraA09t41008Z Brassica rapa HOM05D000926 ORTHO05D000707 8.1e-06 53.9 83 39.8
CARHR233210 Cardamine hirsuta HOM05D000926 ORTHO05D000707 8.1e-06 53.9 79 41.8
AUR62020304 Chenopodium quinoa HOM05D000926 ORTHO05D000707 8.1e-06 53.9 86 44.2
DCAR_010193 Daucus carota HOM05D000926 ORTHO05D000707 8.1e-06 53.9 77 44.2
Lj7C741T17 Lonicera japonica HOM05D000926 ORTHO05D000707 8.1e-06 53.9 78 42.3
Lalb_Chr12g0199171 Lupinus albus HOM05D000926 ORTHO05D000707 8.1e-06 53.9 85 42.4
Nitab4.5_0001110g0150 Nicotiana tabacum HOM05D000926 ORTHO05D000707 8.1e-06 53.9 82 43.9
Sp4g03730 Schrenkiella parvula HOM05D000926 ORTHO05D000707 8.1e-06 53.9 80 38.8


User provided reference genes

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