Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 2.2e-114 415.6 210 100.0
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 1.5e-105 386.3 210 92.9
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 7.0e-92 340.9 210 84.8
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 8.3e-85 317.4 210 81.0
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 2.1e-80 302.8 211 78.7
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 1.1e-71 273.9 210 67.6
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 2.3e-71 272.7 210 68.1
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 1.2e-70 270.4 210 66.7
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 2.2e-69 266.2 210 65.7
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 4.9e-69 265.0 210 66.2
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 1.1e-68 263.8 208 67.8
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 1.4e-68 263.5 212 66.5
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 4.1e-68 261.9 210 64.8
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 5.4e-68 261.5 221 63.3
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 1.6e-67 260.0 212 66.0
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 2.7e-67 259.2 208 63.9
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 6.0e-67 258.1 209 65.6
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 6.0e-67 258.1 211 64.9
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 1.0e-66 257.3 232 61.2
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 1.0e-66 257.3 210 63.3
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 1.0e-66 257.3 202 67.3
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 1.3e-66 256.9 217 64.5
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 6.6e-66 254.6 212 64.6
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 8.6e-66 254.2 213 62.0
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 1.9e-65 253.1 214 65.0
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 3.3e-65 252.3 204 63.7
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 4.3e-65 251.9 211 64.0
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 4.3e-65 251.9 212 62.3
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 4.3e-65 251.9 218 61.0
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 5.6e-65 251.5 176 71.6
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 1.2e-64 250.4 206 62.6
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 1.6e-64 250.0 218 64.2
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 1.6e-64 250.0 181 66.3
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 1.6e-64 250.0 218 65.1
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 3.6e-64 248.8 180 66.7
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 3.6e-64 248.8 200 63.5
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 4.7e-64 248.4 218 63.3
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 1.1e-63 247.3 210 61.9
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 1.1e-63 247.3 184 66.3
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 1.4e-63 246.9 177 66.1
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 1.4e-63 246.9 206 62.1
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 2.4e-63 246.1 210 62.9
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 3.1e-63 245.7 180 66.7
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 5.2e-63 245.0 213 61.5
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 5.2e-63 245.0 208 61.1
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 8.9e-63 244.2 203 62.6
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 8.9e-63 244.2 235 56.6
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 8.9e-63 244.2 187 64.7
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 1.2e-62 243.8 210 60.0
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 1.5e-62 243.4 218 62.8
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 2.0e-62 243.0 208 60.6
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 2.6e-62 242.7 209 62.7
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 5.8e-62 241.5 210 60.0
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 5.8e-62 241.5 210 58.1
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 5.8e-62 241.5 202 62.4
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 7.6e-62 241.1 219 62.1
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 9.9e-62 240.7 185 63.2
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 1.3e-61 240.4 198 63.6
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 1.3e-61 240.4 210 60.0
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 1.3e-61 240.4 202 62.4
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 2.2e-61 239.6 210 60.0
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 6.4e-61 238.0 201 60.2
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 1.1e-60 237.3 203 60.6
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 2.4e-60 236.1 214 60.3
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 5.4e-60 235.0 209 59.3
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 1.2e-59 233.8 210 58.1
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 3.5e-59 232.3 224 58.0
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 4.6e-59 231.9 210 56.7
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 6.0e-59 231.5 203 58.6
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 1.7e-58 229.9 179 63.7
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 3.0e-58 229.2 191 60.2
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 3.0e-58 229.2 200 59.0
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 8.7e-58 227.6 205 59.0
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 1.9e-57 226.5 208 57.7
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 1.9e-57 226.5 205 58.0
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 2.5e-57 226.1 176 63.6
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 4.3e-57 225.3 183 62.8
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 5.6e-57 224.9 203 57.6
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 2.8e-56 222.6 173 65.9
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 2.8e-56 222.6 173 65.9
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 2.8e-56 222.6 173 65.9
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 6.2e-56 221.5 214 58.4
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 6.2e-56 221.5 212 57.1
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 8.1e-56 221.1 173 64.7
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 8.1e-56 221.1 211 57.8
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 1.4e-55 220.3 210 57.6
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 1.4e-55 220.3 163 66.9
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 4.0e-55 218.8 173 64.7
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 1.2e-54 217.2 209 59.3
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 1.2e-54 217.2 212 56.1
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 1.2e-54 217.2 214 58.9
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 1.5e-54 216.9 216 55.6
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 2.0e-54 216.5 212 59.0
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 2.0e-54 216.5 173 64.2
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 1.3e-53 213.8 168 61.9
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 4.9e-53 211.8 199 58.8
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 1.9e-52 209.9 198 56.1
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 3.2e-52 209.1 201 56.2
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 3.2e-52 209.1 209 52.6
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 7.1e-52 208.0 153 64.1
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 6.6e-50 201.4 178 60.7
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 6.2e-48 194.9 181 56.9
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 2.6e-38 162.9 225 45.3
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 4.9e-37 158.7 191 45.5
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 9.3e-36 154.5 120 70.0
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 4.6e-35 152.1 202 44.1
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 1.9e-33 146.7 205 40.0
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 6.2e-32 141.7 207 41.5
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 2.4e-31 139.8 172 41.9
Actinidia00472 Actinidia chinensis HOM05D006662 ORTHO05D008378 6.5e-29 131.7 158 46.8
Duzib052G0855 Durio zibethinus HOM05D006662 ORTHO05D008378 6.5e-29 131.7 101 66.3
Peaxi162Scf00068g00075 Petunia axillaris HOM05D006662 ORTHO05D008378 4.5e-22 109.0 91 59.3
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 1.0e-21 107.8 186 34.4
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 3.8e-21 105.9 197 34.0
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 3.8e-21 105.9 181 32.6
HanXRQChr16g0505241 Helianthus annuus HOM05D000009 ORTHO05D000008 7.9e-19 98.2 102 51.0
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 3.0e-18 96.3 194 29.4
Os03g0765500 Oryza sativa ssp. japonica HOM05D006662 ORTHO05D008378 2.6e-14 83.2 139 36.7
Peaxi162Scf00140g10022 Petunia axillaris HOM05D006662 ORTHO05D008378 4.5e-14 82.4 103 46.6
Pp3c5_28350 Physcomitrium patens HOM05D006662 ORTHO05D008378 1.9e-12 77.0 176 30.1
Rhsim11G0170000 Rhododendron simsii HOM05D006662 ORTHO05D008378 1.4e-07 60.8 46 52.2


User provided reference genes

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