Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C021863.2 Cucumis melo HOM05D008311 ORTHO05D010526 6.3e-160 567.4 289 100.0
CsaV3_2G036620 Cucumis sativus L. HOM05D008311 ORTHO05D010526 4.1e-151 538.1 289 94.8
Sed0001927 Sechium edule HOM05D008311 ORTHO05D010526 4.7e-139 498.0 291 88.0
ClCG09G017160 Citrullus lanatus HOM05D008311 ORTHO05D010526 1.2e-137 493.4 289 87.2
Haze_00388 Corylus avellana HOM05D008311 ORTHO05D010526 8.4e-104 380.9 292 65.8
TAR629G0038 Trochodendron aralioides HOM05D008311 ORTHO05D010526 3.0e-101 372.5 292 63.7
GSVIVG01024350001 Vitis vinifera HOM05D008311 ORTHO05D010526 6.7e-101 371.3 292 63.0
Cfa016060 Carpinus fangiana HOM05D008311 ORTHO05D010526 3.1e-98 362.5 292 64.4
Aqoxy4G02584 Aquilegia oxysepala HOM05D008311 ORTHO05D010526 2.9e-96 355.9 292 60.3
Thecc.05G218800 Theobroma cacao HOM05D008311 ORTHO05D010526 4.9e-96 355.1 292 62.7
MD07G1310100 Malus domestica HOM05D008311 ORTHO05D010526 7.1e-95 351.3 292 61.3
Actinidia08755 Actinidia chinensis HOM05D008311 ORTHO05D010526 9.3e-95 350.9 292 59.2
Duzib128G1797 Durio zibethinus HOM05D008311 ORTHO05D010526 2.1e-94 349.7 294 62.2
Prupe.2G328000 Prunus persica HOM05D008311 ORTHO05D010526 1.0e-93 347.4 293 62.1
Nn3g20131 Nelumbo nucifera HOM05D008311 ORTHO05D010526 3.3e-92 342.4 292 58.2
Manes.09G128000 Manihot esculenta HOM05D008311 ORTHO05D010526 1.6e-91 340.1 292 59.6
Ciclev10020460m.g Citrus clementina HOM05D008311 ORTHO05D010526 3.7e-91 339.0 292 61.0
FAN10G1178 Fragaria x ananassa HOM05D008311 ORTHO05D010526 3.7e-91 339.0 292 60.6
Gorai.004G256700 Gossypium raimondii HOM05D008311 ORTHO05D010526 2.4e-90 336.3 291 61.2
MBI04_g20345_MAGBIO Magnolia biondii HOM05D008311 ORTHO05D010526 6.9e-90 334.7 295 59.0
Gohir.A08G221662 Gossypium hirsutum HOM05D008311 ORTHO05D010526 2.6e-89 332.8 292 60.6
Gohir.D08G241300 Gossypium hirsutum HOM05D008311 ORTHO05D010526 8.5e-88 327.8 293 60.4
AUR62028199 Chenopodium quinoa HOM05D008311 ORTHO05D010526 1.4e-87 327.0 293 56.0
DCAR_020420 Daucus carota HOM05D008311 ORTHO05D010526 6.1e-86 321.6 292 56.5
QL09p022981 Quercus lobata HOM05D008311 ORTHO05D010526 1.0e-85 320.9 375 49.1
RcHm_v2.0_Chr1g0384481 Rosa chinensis HOM05D008311 ORTHO05D010526 3.9e-85 318.9 292 58.9
Dinv29140 Davidia involucrata HOM05D008311 ORTHO05D010526 2.0e-84 316.6 270 61.1
Eucgr.A02984 Eucalyptus grandis HOM05D008311 ORTHO05D010526 3.4e-81 305.8 292 54.8
FAN03G2372 Fragaria x ananassa HOM05D008311 ORTHO05D010526 6.5e-80 301.6 292 55.8
AUR62002082 Chenopodium quinoa HOM05D008311 ORTHO05D010526 9.4e-79 297.7 268 56.3
CDE11G1038 Ceratophyllum demersum HOM05D008311 ORTHO05D010526 1.2e-78 297.4 295 51.9
ATR0665G332 Amborella trichopoda HOM05D008311 ORTHO05D010526 3.9e-77 292.4 302 53.3
CiPaw.05G215000 Carya illinoinensis HOM05D008311 ORTHO05D010526 1.1e-76 290.8 225 64.9
Lj3A885T48 Lonicera japonica HOM05D008311 ORTHO05D010526 5.7e-76 288.5 260 61.2
vmacro06529 Vaccinium macrocarpon HOM05D008311 ORTHO05D010526 1.3e-72 277.3 235 58.3
COL.COLO4_15199 Corchorus olitorius HOM05D008311 ORTHO05D010526 3.8e-72 275.8 295 52.2
Atru.chr12.1923 Acer truncatum HOM05D008311 ORTHO05D010526 5.0e-72 275.4 291 52.9
CDE11G1017 Ceratophyllum demersum HOM05D008311 ORTHO05D010526 2.5e-71 273.1 295 45.8
HPP92_005385 Vanilla planifolia HOM05D008311 ORTHO05D010526 2.3e-69 266.5 300 49.3
Zm00001eb429910 Zea mays HOM05D008311 ORTHO05D010526 3.9e-69 265.8 301 48.5
THA.LOC104821739 Tarenaya hassleriana HOM05D008311 ORTHO05D010526 4.4e-68 262.3 254 56.7
Lsat_1_v5_gn_8_108920 Lactuca sativa HOM05D008311 ORTHO05D010526 7.0e-66 255.0 293 48.5
EL10Ac3g05056 Beta vulgaris HOM05D008311 ORTHO05D010526 5.9e-65 251.9 292 46.2
HPP92_009011 Vanilla planifolia HOM05D008311 ORTHO05D010526 1.0e-61 241.1 300 45.7
Zm00001eb201380 Zea mays HOM05D008311 ORTHO05D010526 2.4e-58 229.9 274 45.6
SEGI_24543 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 4.5e-57 225.7 263 46.0
Zm00001eb341760 Zea mays HOM05D008311 ORTHO05D010526 9.4e-55 218.0 265 43.8
Pp3c16_5410 Physcomitrium patens HOM05D008311 ORTHO05D010526 9.8e-52 208.0 292 38.4
Os04g0592500 Oryza sativa ssp. japonica HOM05D008311 ORTHO05D010526 6.3e-51 205.3 296 42.2
AagrBONN_evm.TU.Sc2ySwM_117.4008 Anthoceros agrestis HOM05D008311 ORTHO05D010526 3.8e-48 196.1 300 39.3
SEGI_38800 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 2.3e-24 117.1 126 49.2
CSS0045669 Camellia sinensis var. sinensis HOM05D008311 ORTHO05D010526 3.0e-24 116.7 100 60.0
SEGI_19325 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 1.6e-22 110.9 135 43.7
Zm00001eb207330 Zea mays HOM05D008311 ORTHO05D010526 5.6e-15 85.9 98 45.9
Dinv07670 Davidia involucrata HOM05D008311 ORTHO05D183374 8.9e-13 78.6 49 77.6
Potri.013G079301 Populus trichocarpa HOM05D008311 ORTHO05D010526 2.9e-11 73.6 62 58.1


User provided reference genes

Program Settings