Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 0.0e+00 1195.3 613 100.0
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 2.0e-280 968.8 580 87.9
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 8.0e-237 823.9 582 78.0
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 1.2e-195 687.2 547 69.3
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 1.2e-160 570.9 574 56.3
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 1.5e-150 537.3 577 55.1
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 6.3e-149 531.9 549 56.5
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 5.3e-148 528.9 577 52.9
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 1.7e-146 523.9 556 54.0
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 9.4e-145 518.1 579 52.7
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 4.6e-144 515.8 578 51.4
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 7.9e-144 515.0 554 53.4
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 3.9e-143 512.7 569 52.4
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 9.7e-142 508.1 569 52.5
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 3.7e-141 506.1 578 51.9
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 6.3e-141 505.4 569 52.0
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 1.1e-140 504.6 577 52.2
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 2.4e-140 503.4 577 52.7
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 4.1e-140 502.7 583 51.6
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 5.9e-139 498.8 577 51.6
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 1.4e-137 494.2 576 50.0
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 5.5e-137 492.3 568 51.8
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 5.1e-135 485.7 565 49.2
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.1e-134 484.6 596 50.0
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.1e-134 484.6 594 49.7
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 2.6e-134 483.4 522 55.6
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 9.7e-134 481.5 551 50.5
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 2.2e-133 480.3 559 49.4
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 3.7e-133 479.6 585 50.9
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 4.8e-133 479.2 565 49.6
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 5.9e-131 472.2 554 50.2
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 6.5e-130 468.8 567 48.7
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 4.0e-127 459.5 541 51.4
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 4.4e-126 456.1 608 46.1
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 7.5e-126 455.3 567 48.7
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 1.7e-125 454.1 552 47.8
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 1.3e-122 444.5 567 46.7
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 2.2e-122 443.7 568 47.9
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 3.2e-121 439.9 550 48.7
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 4.2e-121 439.5 543 49.7
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 4.2e-121 439.5 546 46.2
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 3.6e-120 436.4 516 49.6
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 8.0e-120 435.3 552 44.6
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 1.0e-119 434.9 553 45.6
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 1.8e-119 434.1 563 46.0
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 2.3e-119 433.7 557 46.9
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 3.0e-119 433.3 568 46.7
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 4.0e-119 433.0 557 45.2
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 5.2e-119 432.6 554 46.9
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 2.0e-118 430.6 569 45.0
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 3.4e-118 429.9 559 45.3
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 7.5e-118 428.7 541 45.3
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 7.5e-118 428.7 546 46.9
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 2.8e-117 426.8 614 43.3
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 8.3e-117 425.2 542 45.4
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 1.8e-116 424.1 545 45.5
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 4.5e-115 419.5 432 52.5
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 5.9e-115 419.1 527 47.2
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 7.7e-115 418.7 618 45.0
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 6.5e-114 415.6 538 45.9
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 8.5e-114 415.2 447 53.5
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 5.5e-113 412.5 553 45.8
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 7.2e-113 412.1 567 43.6
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 2.1e-112 410.6 569 44.5
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 2.7e-112 410.2 527 48.2
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 4.7e-112 409.5 558 45.0
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 8.0e-112 408.7 566 44.7
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 2.3e-111 407.1 578 44.1
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 8.8e-111 405.2 509 47.3
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 2.6e-110 403.7 576 43.2
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 3.4e-110 403.3 545 44.8
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 6.3e-109 399.1 564 43.6
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 1.8e-108 397.5 548 44.0
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 3.5e-107 393.3 561 43.5
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 4.5e-107 392.9 563 44.0
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 5.9e-107 392.5 572 43.5
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 1.0e-106 391.7 523 45.5
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 1.3e-106 391.3 502 46.8
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 1.3e-106 391.3 502 46.8
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 3.3e-105 386.7 532 46.4
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 9.5e-105 385.2 564 43.3
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 8.0e-104 382.1 535 42.8
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 1.4e-103 381.3 489 48.9
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 4.0e-103 379.8 587 44.1
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 3.2e-100 370.2 553 41.2
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 6.6e-98 362.5 595 40.7
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 1.8e-95 354.4 518 43.6
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 3.2e-92 343.6 412 50.5
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 3.9e-90 336.7 398 50.5
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 8.6e-90 335.5 568 40.0
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 4.0e-87 326.6 553 38.5
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 7.5e-86 322.4 465 43.2
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 9.8e-86 322.0 456 46.1
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 6.0e-75 286.2 541 36.6
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 5.1e-74 283.1 541 36.0
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 3.3e-73 280.4 415 41.4
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 3.0e-66 257.3 550 34.7
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 2.8e-64 250.8 490 36.3
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 3.5e-59 233.8 412 37.6
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 8.7e-58 229.2 570 31.2
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 6.2e-56 223.0 559 32.9
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 5.3e-55 219.9 249 49.0
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 3.2e-52 210.7 437 34.1
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 1.5e-49 201.8 321 41.7
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 3.1e-47 194.1 194 53.6
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 4.0e-47 193.7 256 48.0
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 2.0e-46 191.4 367 33.5
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.1e-44 185.7 167 57.5
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 1.8e-39 168.3 232 46.6
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 6.3e-32 143.3 246 39.4
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 8.5e-29 132.9 166 46.4
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 5.7e-25 120.2 265 31.7
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 4.5e-22 110.5 305 27.9
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 9.1e-15 86.3 87 51.7
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 5.9e-14 83.6 164 39.0
Haze_23483 Corylus avellana HOM05D006347 ORTHO05D007835 1.8e-10 72.0 134 39.6
Haze_23490 Corylus avellana HOM05D006347 ORTHO05D007835 4.8e-08 63.9 113 43.4
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 4.8e-08 63.9 151 32.5
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 5.3e-07 60.5 130 32.3
CSS0039987 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 5.3e-07 60.5 65 53.8
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 2.0e-06 58.5 49 53.1
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 5.9e-06 57.0 50 56.0


User provided reference genes

Program Settings