Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C021450.2 Cucumis melo HOM05D024769 ORTHO05D010553 1.0e-182 643.3 330 100.0
CsaV3_6G014740 Cucumis sativus L. HOM05D024769 ORTHO05D010553 4.8e-164 581.3 331 92.4
ClCG02G021920 Citrullus lanatus HOM05D024769 ORTHO05D010553 2.1e-130 469.5 342 77.2
Haze_23449 Corylus avellana HOM05D011404 ORTHO05D010553 2.1e-21 107.5 292 31.2
TAR633G2541 Trochodendron aralioides HOM05D011404 ORTHO05D010553 6.0e-21 105.9 348 31.6
TAR623G0178 Trochodendron aralioides HOM05D011404 ORTHO05D010553 1.7e-20 104.4 381 30.2
Cfa010082 Carpinus fangiana HOM05D011404 ORTHO05D010553 1.9e-19 100.9 311 31.5
Dinv12524 Davidia involucrata HOM05D011404 ORTHO05D010553 2.1e-18 97.4 339 32.2
QL01p013727 Quercus lobata HOM05D011404 ORTHO05D010553 7.6e-16 89.0 318 32.4
Thecc.09G291600 Theobroma cacao HOM05D011197 ORTHO05D010553 1.4e-14 84.7 289 30.1
Gohir.A05G083700 Gossypium hirsutum HOM05D011197 ORTHO05D010553 1.9e-14 84.3 307 28.7
Potri.004G188300 Populus trichocarpa HOM05D011404 ORTHO05D010553 3.2e-14 83.6 333 30.3
Sabra04G0127300 Salix brachista HOM05D011404 ORTHO05D010553 7.1e-14 82.4 314 29.9
Gorai.009G088300 Gossypium raimondii HOM05D011197 ORTHO05D010553 1.6e-13 81.3 307 28.3
Manes.11G157000 Manihot esculenta HOM05D011404 ORTHO05D010553 3.5e-13 80.1 313 30.7
Gohir.D05G086600 Gossypium hirsutum HOM05D011197 ORTHO05D010553 4.6e-13 79.7 307 28.3
Nn2g13996 Nelumbo nucifera HOM05D011404 ORTHO05D010553 4.6e-13 79.7 127 41.7
Sabra09G0117600 Salix brachista HOM05D011404 ORTHO05D010553 1.7e-12 77.8 323 27.2
Nitab4.5_0003082g0020 Nicotiana tabacum HOM05D011877 ORTHO05D010553 2.3e-12 77.4 295 31.2
Solyc06g074550.3 Solanum lycopersicum HOM05D011877 ORTHO05D010553 2.3e-12 77.4 283 30.7
Sopen06g031020 Solanum pennellii HOM05D011877 ORTHO05D010553 3.0e-12 77.0 283 31.1
Lj3g0007201 Lotus japonicus HOM05D011197 ORTHO05D010553 1.9e-11 74.3 284 29.9
Potri.009G149000 Populus trichocarpa HOM05D011404 ORTHO05D010553 3.3e-11 73.6 327 27.5
Ca_19372_v3 Cicer arietinum L. HOM05D011197 ORTHO05D010553 4.3e-11 73.2 306 29.4
PGSC0003DMG400007124 Solanum tuberosum HOM05D011877 ORTHO05D010553 4.3e-11 73.2 305 32.5
ATR0820G036 Amborella trichopoda HOM05D024769 ORTHO05D010553 9.6e-11 72.0 110 40.0
Eucgr.J00427 Eucalyptus grandis HOM05D024769 ORTHO05D010553 2.8e-10 70.5 322 29.5
Nitab4.5_0009666g0020 Nicotiana tabacum HOM05D011877 ORTHO05D010553 6.2e-10 69.3 313 28.4
COL.COLO4_19296 Corchorus olitorius HOM05D011197 ORTHO05D010553 1.1e-09 68.6 321 28.3
Phvul.011G090200 Phaseolus vulgaris HOM05D011197 ORTHO05D010553 2.4e-09 67.4 152 36.2
Nitab4.5_0001453g0080 Nicotiana tabacum HOM05D011877 ORTHO05D010553 3.1e-09 67.0 286 28.0
Peaxi162Scf00789g00061 Petunia axillaris HOM05D011877 ORTHO05D010553 4.0e-09 66.6 289 27.3
Nn6g35047 Nelumbo nucifera HOM05D011404 ORTHO05D010553 3.4e-08 63.5 268 27.2
Glyma.12G085100 Glycine max HOM05D011197 ORTHO05D010553 5.8e-08 62.8 175 34.3
Manes.04G008500 Manihot esculenta HOM05D011404 ORTHO05D010553 7.6e-08 62.4 309 31.4
Nitab4.5_0002729g0010 Nicotiana tabacum HOM05D011877 ORTHO05D010553 2.2e-07 60.8 295 29.2
VMungo1127G2265 Vigna mungo HOM05D011197 ORTHO05D010553 6.4e-07 59.3 193 34.2
Psat7g190520 Pisum sativum HOM05D011197 ORTHO05D010553 8.4e-07 58.9 127 32.3
Medtr4g055410 Medicago truncatula HOM05D011197 ORTHO05D010553 1.4e-06 58.2 117 29.9
TPR.G15575 Trifolium pratense HOM05D011197 ORTHO05D010553 1.4e-06 58.2 171 28.7
HanXRQChr14g0451971 Helianthus annuus HOM05D011877 ORTHO05D010553 5.4e-06 56.2 156 34.0


User provided reference genes

Program Settings