Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C021423.2 Cucumis melo HOM05D000531 ORTHO05D000877 1.4e-86 323.2 201 100.0
CsaV3_6G015010 Cucumis sativus L. HOM05D000531 ORTHO05D000877 2.8e-45 186.0 199 61.3
CsaV3_6G015030 Cucumis sativus L. HOM05D000531 ORTHO05D000877 8.1e-29 131.3 164 51.8
MELO3C021421.2 Cucumis melo HOM05D000531 ORTHO05D000877 1.1e-28 131.0 164 51.8
ClCG02G022170 Citrullus lanatus HOM05D000531 ORTHO05D000877 3.8e-26 122.5 164 48.8
CsaV3_6G015020 Cucumis sativus L. HOM05D000531 ORTHO05D171953 3.0e-15 86.3 53 79.2
Dinv29474 Davidia involucrata HOM05D000531 ORTHO05D000877 1.1e-09 67.8 97 45.4
Prupe.6G128900 Prunus persica HOM05D000531 ORTHO05D000877 6.0e-08 62.0 75 46.7
Medtr7g104480 Medicago truncatula HOM05D000531 ORTHO05D000877 7.9e-08 61.6 74 48.6
Oeu009222.1 Olea europaea HOM05D000531 ORTHO05D000877 1.0e-07 61.2 82 46.3
Nitab4.5_0021113g0010 Nicotiana tabacum HOM05D000531 ORTHO05D000877 1.3e-07 60.8 73 50.7
Oeu014896.2 Olea europaea HOM05D000531 ORTHO05D000877 1.3e-07 60.8 75 53.3
GSVIVG01036137001 Vitis vinifera HOM05D000531 ORTHO05D000877 1.3e-07 60.8 93 45.2
Glyma.13G317000 Glycine max HOM05D000531 ORTHO05D000877 2.3e-07 60.1 75 45.3
Gohir.D01G196300 Gossypium hirsutum HOM05D000531 ORTHO05D000877 2.3e-07 60.1 74 50.0
Gorai.002G240500 Gossypium raimondii HOM05D000531 ORTHO05D000877 2.3e-07 60.1 74 50.0
Lj3P998T16 Lonicera japonica HOM05D000531 ORTHO05D000877 2.3e-07 60.1 96 38.5
Solyc09g009490.4 Solanum lycopersicum HOM05D000531 ORTHO05D000877 2.3e-07 60.1 80 45.0
Sopen09g004230 Solanum pennellii HOM05D000531 ORTHO05D000877 2.3e-07 60.1 80 45.0
Migut.L01774 Erythranthe guttata HOM05D000531 ORTHO05D000877 3.0e-07 59.7 77 48.1
Gohir.A01G206900 Gossypium hirsutum HOM05D000531 ORTHO05D000877 3.0e-07 59.7 74 50.0
QL07p039212 Quercus lobata HOM05D000531 ORTHO05D000877 3.0e-07 59.7 98 37.8
RcHm_v2.0_Chr5g0044361 Rosa chinensis HOM05D000531 ORTHO05D000877 3.0e-07 59.7 71 47.9
PGSC0003DMG400002660 Solanum tuberosum HOM05D000531 ORTHO05D000877 3.0e-07 59.7 80 45.0
Nitab4.5_0001725g0110 Nicotiana tabacum HOM05D000531 ORTHO05D000877 3.9e-07 59.3 73 49.3
THA.LOC104824465 Tarenaya hassleriana HOM05D000531 ORTHO05D000877 3.9e-07 59.3 94 41.5
TWI77G0738 Tripterygium wilfordii HOM05D000531 ORTHO05D000877 3.9e-07 59.3 88 43.2
Hma1.2p1_0084F.1_g043680 Hydrangea macrophylla HOM05D000531 ORTHO05D000877 5.1e-07 58.9 73 47.9
Peaxi162Scf00290g00115 Petunia axillaris HOM05D000531 ORTHO05D000877 5.1e-07 58.9 73 49.3
Sed0017762 Sechium edule HOM05D000531 ORTHO05D000877 5.1e-07 58.9 108 43.5
PGR004G2014 Punica granatum HOM05D000531 ORTHO05D000877 6.7e-07 58.5 75 46.7
CiPaw.09G013200 Carya illinoinensis HOM05D000531 ORTHO05D000877 8.7e-07 58.2 95 43.2
Manes.11G161300 Manihot esculenta HOM05D000531 ORTHO05D000877 8.7e-07 58.2 94 40.4
RcHm_v2.0_Chr5g0044371 Rosa chinensis HOM05D000531 ORTHO05D000877 8.7e-07 58.2 74 48.6
VMungo0720G0533 Vigna mungo HOM05D000531 ORTHO05D000877 8.7e-07 58.2 86 45.3
MSTRG.26642 Avicennia marina HOM05D000531 ORTHO05D000877 1.5e-06 57.4 71 46.5
Gorai.006G111600 Gossypium raimondii HOM05D000531 ORTHO05D000877 1.5e-06 57.4 90 41.1
TWI74G1017 Tripterygium wilfordii HOM05D000531 ORTHO05D000877 1.5e-06 57.4 90 41.1
AL5G22570 Arabidopsis lyrata HOM05D000531 ORTHO05D000877 1.9e-06 57.0 83 39.8
FAN05G0484 Fragaria x ananassa HOM05D000531 ORTHO05D000877 1.9e-06 57.0 120 37.5
FAN05G1269 Fragaria x ananassa HOM05D000531 ORTHO05D000877 1.9e-06 57.0 120 37.5
FAN09G0336 Fragaria x ananassa HOM05D000531 ORTHO05D000877 1.9e-06 57.0 119 37.8
Gohir.A13G222800 Gossypium hirsutum HOM05D000531 ORTHO05D000877 1.9e-06 57.0 74 44.6
Gohir.D13G227800 Gossypium hirsutum HOM05D000531 ORTHO05D000877 1.9e-06 57.0 74 44.6
Gorai.013G258300 Gossypium raimondii HOM05D000531 ORTHO05D000877 1.9e-06 57.0 74 44.6
Potri.009G164500 Populus trichocarpa HOM05D000531 ORTHO05D000877 1.9e-06 57.0 100 38.0
Lj3g0004023 Lotus japonicus HOM05D000444 ORTHO05D000489 2.5e-06 56.6 77 39.0
Sabra09G0128700 Salix brachista HOM05D000531 ORTHO05D000877 2.5e-06 56.6 89 40.4
Thecc.09G284800 Theobroma cacao HOM05D000531 ORTHO05D000877 2.5e-06 56.6 96 41.7
CiPaw.10G009100 Carya illinoinensis HOM05D000531 ORTHO05D000877 3.3e-06 56.2 78 47.4
Eucgr.A01499 Eucalyptus grandis HOM05D000531 ORTHO05D000877 3.3e-06 56.2 68 48.5
Gohir.A09G095200 Gossypium hirsutum HOM05D000531 ORTHO05D000877 3.3e-06 56.2 90 41.1
Actinidia05437 Actinidia chinensis HOM05D000531 ORTHO05D000877 4.3e-06 55.8 76 47.4
FAN02G3433 Fragaria x ananassa HOM05D000531 ORTHO05D000877 4.3e-06 55.8 120 36.7
MD03G1143300 Malus domestica HOM05D000531 ORTHO05D000877 4.3e-06 55.8 76 44.7
Phvul.005G124200 Phaseolus vulgaris HOM05D000531 ORTHO05D000877 4.3e-06 55.8 81 35.8
PGR102G0213 Punica granatum HOM05D000531 ORTHO05D000877 4.3e-06 55.8 98 40.8
unitig_899.g15203 Utricularia gibba HOM05D000531 ORTHO05D000877 4.3e-06 55.8 72 47.2
Aa31LG4G13920 Aethionema arabicum HOM05D000531 ORTHO05D000877 5.6e-06 55.5 78 41.0
Ah.15g091000 Amaranthus hybridus HOM05D000531 ORTHO05D000877 5.6e-06 55.5 77 41.6
CANSAT54G0673 Cannabis sativa HOM05D000531 ORTHO05D000877 5.6e-06 55.5 76 46.1
Carub.0005s1015 Capsella rubella HOM05D000531 ORTHO05D000877 5.6e-06 55.5 83 39.8
Cfa016599 Carpinus fangiana HOM05D000531 ORTHO05D000877 5.6e-06 55.5 76 47.4
Ca_01664_v3 Cicer arietinum L. HOM05D000444 ORTHO05D012396 5.6e-06 55.5 93 37.6
CsaV3_3G037220 Cucumis sativus L. HOM05D000531 ORTHO05D000877 5.6e-06 55.5 74 45.9
Lj5g0006001 Lotus japonicus HOM05D000531 ORTHO05D000877 5.6e-06 55.5 79 46.8
Haze_19600 Corylus avellana HOM05D000531 ORTHO05D000877 7.4e-06 55.1 77 45.5
Duzib170G0046 Durio zibethinus HOM05D000531 ORTHO05D000877 7.4e-06 55.1 96 41.7
AT3G44460 Arabidopsis thaliana HOM05D000531 ORTHO05D000877 9.6e-06 54.7 86 41.9
ClCG10G019030 Citrullus lanatus HOM05D000531 ORTHO05D000877 9.6e-06 54.7 75 48.0
FvH4_6g18510 Fragaria vesca HOM05D000531 ORTHO05D000877 9.6e-06 54.7 82 43.9
FAN14G1525 Fragaria x ananassa HOM05D000531 ORTHO05D000877 9.6e-06 54.7 82 43.9
MD14G1021600 Malus domestica HOM05D000531 ORTHO05D000877 9.6e-06 54.7 80 50.0
Potri.006G083000 Populus trichocarpa HOM05D000531 ORTHO05D000877 9.6e-06 54.7 87 42.5
Prupe.7G112200 Prunus persica HOM05D000531 ORTHO05D000877 9.6e-06 54.7 79 49.4
Sed0011326 Sechium edule HOM05D000531 ORTHO05D000877 9.6e-06 54.7 75 48.0
VMungo1080G1547 Vigna mungo HOM05D000531 ORTHO05D000877 9.6e-06 54.7 84 36.9


User provided reference genes

Program Settings