Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 2635.1 1312 100.0
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 2530.4 1319 95.8
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 2428.3 1249 96.2
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 2355.5 1264 91.9
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 2226.1 1280 85.4
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 2223.4 1280 85.4
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 2218.7 1265 85.6
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 2204.5 1267 85.0
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 2198.7 1260 85.6
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 2193.7 1266 84.8
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 2190.2 1266 84.5
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 2189.5 1266 85.0
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 2186.4 1266 84.1
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 2185.2 1267 85.1
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 2184.8 1266 84.2
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2184.5 1265 85.4
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 2183.7 1266 84.3
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 2183.3 1268 84.7
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 2182.5 1266 84.3
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 2181.8 1267 84.4
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 2181.0 1265 84.9
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2180.2 1266 84.0
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 2177.9 1265 84.8
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2177.9 1266 84.0
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2173.7 1265 84.7
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2171.7 1266 83.8
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 2171.4 1265 84.2
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 2171.4 1265 84.0
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2171.0 1265 84.5
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 2168.3 1266 83.3
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 2167.1 1267 83.5
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2166.7 1261 84.8
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2166.7 1265 83.6
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2164.8 1266 84.0
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 2163.3 1265 83.3
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 2162.5 1265 83.5
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2160.6 1266 83.9
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 2160.6 1265 83.2
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2159.4 1267 83.3
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 2157.9 1267 83.3
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2155.9 1266 82.9
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 2155.6 1266 83.6
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 2155.2 1291 82.3
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 2154.0 1265 82.9
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2153.3 1266 82.9
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2153.3 1282 82.5
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 2152.9 1266 82.9
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 2152.9 1267 83.0
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2152.5 1267 82.9
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 2152.5 1265 83.0
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 2152.5 1266 82.9
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 2152.1 1265 83.0
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 2149.8 1265 82.7
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 2149.4 1266 82.8
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2149.0 1265 82.9
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 2149.0 1269 82.7
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 2149.0 1265 82.9
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 2147.5 1266 82.7
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2147.1 1267 82.5
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 2146.7 1265 83.1
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2144.8 1266 82.5
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 2142.9 1271 82.5
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 2142.5 1265 82.1
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 2141.3 1265 83.4
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2141.3 1266 82.9
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2137.1 1265 83.7
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 2137.1 1268 82.2
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 2132.8 1269 81.9
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 2130.9 1268 81.8
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2130.5 1266 82.5
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 2122.4 1267 81.8
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 2121.7 1267 81.8
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 2121.3 1267 82.2
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 2119.0 1281 81.5
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2118.6 1238 83.6
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2112.4 1268 81.5
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2112.0 1266 81.6
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 2112.0 1267 81.5
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 2110.9 1266 82.4
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 2108.2 1285 80.9
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 2107.8 1263 81.8
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 2090.1 1252 82.3
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 2087.0 1275 80.7
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 2085.5 1207 84.5
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 2083.5 1267 80.1
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 2081.6 1267 80.8
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 2077.4 1267 80.3
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 2076.2 1266 80.9
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 2072.4 1266 79.9
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2057.7 1266 80.9
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2045.0 1272 78.2
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 2016.1 1266 78.8
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2005.3 1265 78.7
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 1980.7 1267 77.0
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1970.7 1160 83.2
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1915.2 1272 73.4
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1887.1 1270 74.3
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1862.8 1278 71.4
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 1837.0 1279 71.2
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1834.7 1068 83.1
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1834.7 1190 76.9
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1822.8 1251 72.2
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1804.6 1089 81.5
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 1773.8 1129 78.2
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1769.2 1268 71.3
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1753.4 1264 70.6
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1619.0 962 80.8
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 1545.0 1046 73.1
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1540.8 1320 61.2
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 0.0e+00 1379.8 812 82.0
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 0.0e+00 1352.8 1265 59.1
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1332.8 1340 53.6
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 0.0e+00 1307.7 1390 52.5
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 0.0e+00 1223.8 724 82.2
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1161.0 1018 61.5
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1104.0 810 69.6
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 7.4e-264 914.8 567 79.7
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 1.8e-262 910.2 1245 41.8
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 4.0e-254 882.5 502 85.9
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 2.6e-221 773.5 682 58.9
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 2.6e-221 773.5 524 74.6
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.8e-198 697.6 451 78.3
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 3.3e-179 633.6 389 81.5
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 7.4e-131 473.0 359 66.0
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 1.8e-121 441.8 311 74.3
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 1.0e-108 399.4 270 77.8
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 1.3e-79 302.8 479 42.4
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 6.2e-69 267.3 169 75.7
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 4.4e-67 261.2 169 74.6
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.7e-66 259.2 169 74.0
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.3e-63 249.6 138 91.3
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 1.2e-59 236.5 234 56.0
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 6.2e-45 187.6 115 75.7
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 3.0e-39 168.7 91 84.6
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 3.9e-39 168.3 152 64.5
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 5.6e-38 164.5 182 54.9
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 1.0e-31 143.7 98 66.3
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 3.4e-27 128.6 104 63.5


User provided reference genes

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