Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C021063.2 Cucumis melo HOM05D000283 ORTHO05D004861 7.6e-16 85.9 39 100.0
ClCG02G013690 Citrullus lanatus HOM05D000283 ORTHO05D004861 9.9e-08 58.9 26 100.0
Sed0007781 Sechium edule HOM05D000283 ORTHO05D004861 1.7e-07 58.2 32 81.2
MELO3C011710.2 Cucumis melo HOM05D000283 ORTHO05D004861 2.2e-07 57.8 26 96.2
Aa31LG10G10070 Aethionema arabicum HOM05D000283 ORTHO05D004861 4.9e-07 56.6 32 75.0
Manes.10G039500 Manihot esculenta HOM05D000283 ORTHO05D004861 4.9e-07 56.6 26 92.3
Duzib114G0902 Durio zibethinus HOM05D000283 ORTHO05D004861 6.4e-07 56.2 32 75.0
Cfa001563 Carpinus fangiana HOM05D000283 ORTHO05D004861 1.1e-06 55.5 26 92.3
COL.COLO4_05799 Corchorus olitorius HOM05D000283 ORTHO05D004861 1.4e-06 55.1 32 71.9
CsaV3_5G006500 Cucumis sativus L. HOM05D000283 ORTHO05D004861 1.4e-06 55.1 26 92.3
Gohir.A10G208700 Gossypium hirsutum HOM05D000283 ORTHO05D004861 1.4e-06 55.1 32 71.9
Gohir.D10G217000 Gossypium hirsutum HOM05D000283 ORTHO05D004861 1.4e-06 55.1 32 71.9
TAR623G1321 Trochodendron aralioides HOM05D000283 ORTHO05D004861 1.4e-06 55.1 26 92.3
AT3G55070 Arabidopsis thaliana HOM05D000283 ORTHO05D004861 1.9e-06 54.7 32 71.9
MD07G1183500 Malus domestica HOM05D000283 ORTHO05D004861 1.9e-06 54.7 26 84.6
Sed0024713 Sechium edule HOM05D000283 ORTHO05D004861 1.9e-06 54.7 31 80.6
Ciclev10031660m.g Citrus clementina HOM05D000283 ORTHO05D004861 2.4e-06 54.3 26 88.5
Duzib106G0238 Durio zibethinus HOM05D000283 ORTHO05D004861 2.4e-06 54.3 32 71.9
Lalb_Chr21g0307121 Lupinus albus HOM05D000283 ORTHO05D004861 2.4e-06 54.3 26 84.6
SGA_v2.0_scaffold426G51499 Striga asiatica HOM05D000283 ORTHO05D004861 2.4e-06 54.3 26 88.5
THA.LOC104809995 Tarenaya hassleriana HOM05D000283 ORTHO05D004861 2.4e-06 54.3 32 68.8
THA.LOC104810168 Tarenaya hassleriana HOM05D000283 ORTHO05D004861 2.4e-06 54.3 32 68.8
Atru.BG.269.p Acer truncatum HOM05D000283 ORTHO05D004861 3.2e-06 53.9 25 88.0
PSO384G1824 Papaver somniferum HOM05D000283 ORTHO05D004861 3.2e-06 53.9 26 88.5
PSO699G0010 Papaver somniferum HOM05D000283 ORTHO05D004861 3.2e-06 53.9 26 88.5
Thecc.10G063500 Theobroma cacao HOM05D000283 ORTHO05D004861 3.2e-06 53.9 32 71.9
Thhalv10010415m.g Eutrema salsugineum HOM05D000283 ORTHO05D004861 4.2e-06 53.5 32 65.6
MBI05_g05301_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D004861 4.2e-06 53.5 26 84.6
Nn2g12826 Nelumbo nucifera HOM05D000283 ORTHO05D004861 4.2e-06 53.5 26 84.6
Actinidia38228 Actinidia chinensis HOM05D000283 ORTHO05D004861 5.4e-06 53.1 26 84.6
Aqoxy4G03100 Aquilegia oxysepala HOM05D000283 ORTHO05D004861 5.4e-06 53.1 26 84.6
CARHR165090 Cardamine hirsuta HOM05D000283 ORTHO05D004861 5.4e-06 53.1 32 71.9
Gohir.A05G343200 Gossypium hirsutum HOM05D000283 ORTHO05D004861 5.4e-06 53.1 32 68.8
Gohir.D04G081100 Gossypium hirsutum HOM05D000283 ORTHO05D004861 5.4e-06 53.1 32 68.8
Gorai.012G092000 Gossypium raimondii HOM05D000283 ORTHO05D004861 5.4e-06 53.1 32 68.8
Sp5g07350 Schrenkiella parvula HOM05D000283 ORTHO05D004861 5.4e-06 53.1 26 80.8
Haze_16966 Corylus avellana HOM05D000283 ORTHO05D004861 7.1e-06 52.8 26 88.5
Peaxi162Scf00135g00213 Petunia axillaris HOM05D000283 ORTHO05D004861 7.1e-06 52.8 26 84.6
Prupe.2G222200 Prunus persica HOM05D000283 ORTHO05D004861 7.1e-06 52.8 26 84.6
Sabra08G0033500 Salix brachista HOM05D000283 ORTHO05D004861 7.1e-06 52.8 26 88.5
Sabra10G0165600 Salix brachista HOM05D000283 ORTHO05D004861 7.1e-06 52.8 26 88.5
Hund22437 Selenicereus undatus HOM05D000283 ORTHO05D004861 7.1e-06 52.8 26 84.6
AL5G36190 Arabidopsis lyrata HOM05D000283 ORTHO05D004861 9.3e-06 52.4 32 68.8
EL10Ac2g03514 Beta vulgaris HOM05D000283 ORTHO05D004861 9.3e-06 52.4 26 84.6
Carub.0005s2170 Capsella rubella HOM05D000283 ORTHO05D004861 9.3e-06 52.4 32 65.6
CiPaw.02G178300 Carya illinoinensis HOM05D000283 ORTHO05D004861 9.3e-06 52.4 26 84.6
Potri.008G047300 Populus trichocarpa HOM05D000283 ORTHO05D004861 9.3e-06 52.4 26 84.6
Potri.010G213950 Populus trichocarpa HOM05D000283 ORTHO05D004861 9.3e-06 52.4 26 84.6
QL08p057473 Quercus lobata HOM05D000283 ORTHO05D004861 9.3e-06 52.4 25 80.0
TWI63G0514 Tripterygium wilfordii HOM05D000283 ORTHO05D004861 9.3e-06 52.4 26 84.6


User provided reference genes

Program Settings