Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C020901.2 Cucumis melo HOM05D000370 ORTHO05D001366 9.0e-93 343.6 175 100.0
CsaV3_2G016790 Cucumis sativus L. HOM05D000370 ORTHO05D001366 5.5e-66 254.6 154 88.3
ClCG02G012680 Citrullus lanatus HOM05D000370 ORTHO05D001366 3.7e-54 215.3 154 76.6
MELO3C034589.2 Cucumis melo HOM05D000370 ORTHO05D001366 7.3e-34 147.9 86 87.2
Sed0003905 Sechium edule HOM05D000370 ORTHO05D001366 1.6e-33 146.7 173 53.8
Thecc.01G052500 Theobroma cacao HOM05D000370 ORTHO05D001366 1.9e-13 80.1 179 37.4
COL.COLO4_11382 Corchorus olitorius HOM05D000370 ORTHO05D001366 3.5e-12 75.9 180 38.3
Duzib147G0580 Durio zibethinus HOM05D000370 ORTHO05D001366 4.6e-12 75.5 176 36.9
Gohir.D12G088500 Gossypium hirsutum HOM05D000370 ORTHO05D001366 4.6e-12 75.5 180 36.7
Gorai.008G074600 Gossypium raimondii HOM05D000370 ORTHO05D001366 4.6e-12 75.5 180 36.7
Glyma.05G090400 Glycine max HOM05D000370 ORTHO05D001366 6.0e-12 75.1 178 34.8
Gohir.A12G070433 Gossypium hirsutum HOM05D000370 ORTHO05D001366 1.3e-11 73.9 180 36.1
Cpa.g.sc55.184 Carica papaya HOM05D000370 ORTHO05D001366 2.3e-11 73.2 182 36.8
Glyma.17G176400 Glycine max HOM05D000370 ORTHO05D001366 1.1e-10 70.9 178 33.7
QL06p042271 Quercus lobata HOM05D000370 ORTHO05D001366 1.1e-10 70.9 181 38.1
Prupe.7G136300 Prunus persica HOM05D000370 ORTHO05D001366 1.5e-10 70.5 183 36.1
Ca_22187_v3 Cicer arietinum L. HOM05D000370 ORTHO05D001366 1.9e-10 70.1 174 35.6
Ciclev10025216m.g Citrus clementina HOM05D000370 ORTHO05D001366 5.6e-10 68.6 184 35.9
VMungo0251G3238 Vigna mungo HOM05D000370 ORTHO05D001366 1.6e-09 67.0 178 34.8
Gohir.A11G190400 Gossypium hirsutum HOM05D000370 ORTHO05D001366 2.1e-09 66.6 179 33.0
Gohir.D11G197200 Gossypium hirsutum HOM05D000370 ORTHO05D001366 2.1e-09 66.6 179 33.0
Lalb_Chr16g0388341 Lupinus albus HOM05D000370 ORTHO05D001366 2.1e-09 66.6 178 33.1
MD02G1169000 Malus domestica HOM05D000370 ORTHO05D001366 2.8e-09 66.2 183 32.8
Phvul.003G245700 Phaseolus vulgaris HOM05D000370 ORTHO05D001366 2.8e-09 66.2 178 33.7
TWI09G1255 Tripterygium wilfordii HOM05D000370 ORTHO05D001366 2.8e-09 66.2 183 35.5
Atru.chr3.397 Acer truncatum HOM05D000370 ORTHO05D001366 3.6e-09 65.9 174 33.3
Lj4g0006337 Lotus japonicus HOM05D000370 ORTHO05D001366 3.6e-09 65.9 181 33.1
Lalb_Chr09g0323061 Lupinus albus HOM05D000370 ORTHO05D001366 4.7e-09 65.5 162 34.6
ClCG01G016700 Citrullus lanatus HOM05D000370 ORTHO05D001366 6.2e-09 65.1 182 33.0
Gorai.007G211100 Gossypium raimondii HOM05D000370 ORTHO05D001366 6.2e-09 65.1 179 33.0
Sed0023800 Sechium edule HOM05D000370 ORTHO05D001366 6.2e-09 65.1 182 33.5
arahy.Tifrunner.gnm1.ann1.MY6KA7 Arachis hypogaea HOM05D000370 ORTHO05D001366 1.1e-08 64.3 155 36.1
TPR.G19022 Trifolium pratense HOM05D000370 ORTHO05D001366 1.1e-08 64.3 180 32.8
Glyma.01G184600 Glycine max HOM05D000370 ORTHO05D001366 1.4e-08 63.9 176 33.0
Glyma.11G057600 Glycine max HOM05D000370 ORTHO05D001366 1.4e-08 63.9 180 32.8
CsaV3_6G043120 Cucumis sativus L. HOM05D000370 ORTHO05D001366 1.8e-08 63.5 182 33.0
Lj6g0011150 Lotus japonicus HOM05D000370 ORTHO05D001366 1.8e-08 63.5 180 32.8
arahy.Tifrunner.gnm1.ann1.6RH3SX Arachis hypogaea HOM05D000370 ORTHO05D001366 4.0e-08 62.4 177 32.2
arahy.Tifrunner.gnm1.ann1.HUS56C Arachis hypogaea HOM05D000370 ORTHO05D001366 4.0e-08 62.4 155 35.5
arahy.Tifrunner.gnm1.ann1.P7L3Q8 Arachis hypogaea HOM05D000370 ORTHO05D001366 4.0e-08 62.4 178 32.0
Psat4g087760 Pisum sativum HOM05D000370 ORTHO05D001366 4.0e-08 62.4 181 33.7
Sed0014612 Sechium edule HOM05D000370 ORTHO05D001366 4.0e-08 62.4 183 36.1
MD15G1281000 Malus domestica HOM05D000370 ORTHO05D001366 5.2e-08 62.0 191 34.0
Medtr8g079840 Medicago truncatula HOM05D000370 ORTHO05D001366 5.2e-08 62.0 178 32.6
Haze_15427 Corylus avellana HOM05D000370 ORTHO05D001366 6.8e-08 61.6 181 34.3
Psat2g165440 Pisum sativum HOM05D000370 ORTHO05D001366 6.8e-08 61.6 156 32.7
CiPaw.02G009500 Carya illinoinensis HOM05D000370 ORTHO05D001366 1.2e-07 60.8 179 35.2
MELO3C007549.2 Cucumis melo HOM05D000370 ORTHO05D001366 1.5e-07 60.5 158 32.9
TPR.G31098 Trifolium pratense HOM05D000370 ORTHO05D001366 1.5e-07 60.5 155 32.9
Lj2g0004646 Lotus japonicus HOM05D000370 ORTHO05D001366 3.4e-07 59.3 155 34.2
Dinv29968 Davidia involucrata HOM05D000370 ORTHO05D001366 5.8e-07 58.5 179 36.3
FvH4_1g15700 Fragaria vesca HOM05D000370 ORTHO05D001366 7.6e-07 58.2 185 34.1
FAN19G1739 Fragaria x ananassa HOM05D000370 ORTHO05D001366 7.6e-07 58.2 185 34.1
Hma1.2p1_1744F.1_g300210 Hydrangea macrophylla HOM05D000370 ORTHO05D001366 7.6e-07 58.2 136 37.5
RcHm_v2.0_Chr2g0105011 Rosa chinensis HOM05D000370 ORTHO05D001366 7.6e-07 58.2 184 33.2
Eucgr.H01998 Eucalyptus grandis HOM05D000370 ORTHO05D001366 1.3e-06 57.4 181 33.1
FAN23G1486 Fragaria x ananassa HOM05D000370 ORTHO05D001366 1.3e-06 57.4 185 34.1
FAN28G2765 Fragaria x ananassa HOM05D000370 ORTHO05D001366 1.7e-06 57.0 185 34.1
Medtr5g017790 Medicago truncatula HOM05D000370 ORTHO05D001366 2.2e-06 56.6 155 33.5
CiPaw.01G021500 Carya illinoinensis HOM05D000370 ORTHO05D001366 2.9e-06 56.2 184 32.6
Potri.007G041100 Populus trichocarpa HOM05D000370 ORTHO05D001366 8.4e-06 54.7 186 33.3


User provided reference genes

Program Settings