Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C020890.2 Cucumis melo HOM05D006685 ORTHO05D008244 0.0e+00 1433.7 711 100.0
CsaV3_2G016900 Cucumis sativus L. HOM05D006685 ORTHO05D008244 0.0e+00 1113.6 730 80.7
ClCG02G012840 Citrullus lanatus HOM05D006685 ORTHO05D008244 2.8e-310 1068.1 743 75.9
Sed0001332 Sechium edule HOM05D006685 ORTHO05D008244 5.1e-251 871.3 744 64.2
Cfa004216 Carpinus fangiana HOM05D006685 ORTHO05D008244 2.5e-125 453.8 743 39.0
QL06p043714 Quercus lobata HOM05D006685 ORTHO05D008244 2.3e-118 430.6 745 36.8
Atru.chr3.446 Acer truncatum HOM05D006685 ORTHO05D008244 2.2e-113 414.1 763 36.7
CiPaw.02G011900 Carya illinoinensis HOM05D006685 ORTHO05D008244 2.9e-113 413.7 724 37.3
Duzib187G0300 Durio zibethinus HOM05D006685 ORTHO05D008244 4.9e-113 412.9 743 37.6
Thecc.01G048300 Theobroma cacao HOM05D006685 ORTHO05D008244 1.3e-110 404.8 744 37.8
TAR376G1120 Trochodendron aralioides HOM05D006685 ORTHO05D008244 8.1e-108 395.6 772 36.5
Dinv26751 Davidia involucrata HOM05D006685 ORTHO05D008244 1.5e-106 391.3 740 37.4
Actinidia36520 Actinidia chinensis HOM05D006685 ORTHO05D008244 9.9e-106 388.7 748 36.2
Hma1.2p1_0546F.1_g176210 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 2.9e-105 387.1 647 39.6
COL.COLO4_11329 Corchorus olitorius HOM05D006685 ORTHO05D008244 3.2e-104 383.6 731 36.7
Potri.005G133500 Populus trichocarpa HOM05D006685 ORTHO05D008244 4.6e-103 379.8 739 36.1
Glyma.02G062800 Glycine max HOM05D006685 ORTHO05D008244 1.0e-102 378.6 753 36.1
MD15G1276100 Malus domestica HOM05D006685 ORTHO05D008244 1.0e-102 378.6 747 37.2
Lalb_Chr16g0388451 Lupinus albus HOM05D006685 ORTHO05D008244 3.9e-102 376.7 720 35.6
Manes.13G130000 Manihot esculenta HOM05D006685 ORTHO05D008244 5.1e-102 376.3 741 36.2
RcHm_v2.0_Chr2g0103811 Rosa chinensis HOM05D006685 ORTHO05D008244 8.7e-102 375.6 738 36.0
Lj4g0023849 Lotus japonicus HOM05D006685 ORTHO05D008244 2.8e-100 370.5 731 34.7
CANSAT01G2373 Cannabis sativa HOM05D006685 ORTHO05D008244 6.2e-100 369.4 736 35.3
Sabra05G0107200 Salix brachista HOM05D006685 ORTHO05D008244 5.3e-99 366.3 735 35.5
FAN28G0684 Fragaria x ananassa HOM05D006685 ORTHO05D008244 9.0e-99 365.5 738 35.5
TPR.G30340 Trifolium pratense HOM05D006685 ORTHO05D008244 1.2e-98 365.2 739 34.2
Medtr8g079100 Medicago truncatula HOM05D006685 ORTHO05D008244 5.8e-98 362.8 740 33.8
FvH4_1g14850 Fragaria vesca HOM05D006685 ORTHO05D008244 4.9e-97 359.8 738 35.2
FAN28G1646 Fragaria x ananassa HOM05D006685 ORTHO05D008244 7.1e-96 355.9 731 35.0
VMungo0251G1647 Vigna mungo HOM05D006685 ORTHO05D008244 7.1e-96 355.9 738 32.9
Gorai.008G072600 Gossypium raimondii HOM05D006685 ORTHO05D008244 2.1e-95 354.4 744 36.2
Gohir.A12G068800 Gossypium hirsutum HOM05D006685 ORTHO05D008244 4.6e-95 353.2 745 36.2
Gohir.D12G090400 Gossypium hirsutum HOM05D006685 ORTHO05D008244 4.6e-95 353.2 744 36.0
CSS0018173 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 1.0e-94 352.1 745 33.6
FAN26G3106 Fragaria x ananassa HOM05D006685 ORTHO05D008244 1.3e-94 351.7 768 34.1
Psat4g089520 Pisum sativum HOM05D006685 ORTHO05D008244 1.3e-94 351.7 734 34.5
Phvul.003G248400 Phaseolus vulgaris HOM05D006685 ORTHO05D008244 2.3e-94 350.9 739 33.4
Lj7A20T60 Lonicera japonica HOM05D006685 ORTHO05D008244 6.7e-94 349.4 660 35.9
FAN23G0082 Fragaria x ananassa HOM05D006685 ORTHO05D008244 4.3e-93 346.7 732 35.0
Ciclev10025347m.g Citrus clementina HOM05D006685 ORTHO05D008244 1.3e-92 345.1 565 40.0
Prupe.7G141900 Prunus persica HOM05D006685 ORTHO05D008244 3.1e-91 340.5 743 36.3
DCAR_025691 Daucus carota HOM05D006685 ORTHO05D008244 4.5e-90 336.7 655 35.4
RcHm_v2.0_Chr1g0329901 Rosa chinensis HOM05D006685 ORTHO05D008244 1.2e-87 328.6 722 34.8
vmacro05297 Vaccinium macrocarpon HOM05D006685 ORTHO05D008244 4.6e-87 326.6 728 33.4
Aqoxy6G00915 Aquilegia oxysepala HOM05D006685 ORTHO05D008244 1.0e-86 325.5 739 33.6
Hund16306 Selenicereus undatus HOM05D006685 ORTHO05D008244 1.0e-86 325.5 737 33.2
Sp5g11730 Schrenkiella parvula HOM05D006685 ORTHO05D008244 4.3e-85 320.1 736 32.3
AT3G50430 Arabidopsis thaliana HOM05D006685 ORTHO05D008244 1.3e-84 318.5 738 33.2
Sc03g0001280 Simmondsia chinensis HOM05D006685 ORTHO05D008244 3.7e-84 317.0 724 32.2
MBI16_g19900_MAGBIO Magnolia biondii HOM05D006685 ORTHO05D008244 8.2e-84 315.8 662 35.2
CARHR159940 Cardamine hirsuta HOM05D006685 ORTHO05D008244 1.4e-83 315.1 722 32.0
Thhalv10010194m.g Eutrema salsugineum HOM05D006685 ORTHO05D008244 4.1e-83 313.5 733 31.5
Lj7A17G42 Lonicera japonica HOM05D006685 ORTHO05D008244 5.3e-83 313.2 598 35.3
Hma1.2p1_0546F.1_g176200 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 1.5e-82 311.6 621 36.2
Nn5g29383 Nelumbo nucifera HOM05D006685 ORTHO05D008244 2.0e-82 311.2 614 34.4
Cc07_g05580 Coffea canephora HOM05D006685 ORTHO05D008244 2.2e-81 307.8 743 33.0
Nitab4.5_0000108g0340 Nicotiana tabacum HOM05D006685 ORTHO05D008244 8.5e-81 305.8 753 33.6
HanXRQChr12g0378291 Helianthus annuus HOM05D006685 ORTHO05D008244 2.5e-80 304.3 718 32.9
Nitab4.5_0001014g0040 Nicotiana tabacum HOM05D006685 ORTHO05D008244 5.5e-80 303.1 741 33.1
Ca_22212_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 1.6e-79 301.6 716 31.6
AL5G30586 Arabidopsis lyrata HOM05D006685 ORTHO05D008244 4.6e-79 300.1 744 31.2
BcaB05g23218 Brassica carinata HOM05D006685 ORTHO05D008244 2.6e-77 294.3 715 31.7
Ca_22230_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 2.6e-77 294.3 709 31.3
Sopen02g034940 Solanum pennellii HOM05D006685 ORTHO05D008244 3.3e-77 293.9 750 32.1
Eucgr.I01015 Eucalyptus grandis HOM05D006685 ORTHO05D008244 4.4e-77 293.5 615 36.4
BraA01t02325Z Brassica rapa HOM05D006685 ORTHO05D008244 2.2e-76 291.2 731 30.8
CAN.G836.36 Capsicum annuum HOM05D006685 ORTHO05D008244 4.8e-76 290.0 721 31.6
BolC1t02922H Brassica oleracea HOM05D006685 ORTHO05D008244 6.3e-76 289.7 732 30.1
Solyc02g090260.3 Solanum lycopersicum HOM05D006685 ORTHO05D008244 2.0e-74 284.6 732 32.0
C01p29820 Brassica napus HOM05D006685 ORTHO05D008244 4.5e-74 283.5 724 30.2
PGSC0003DMG402010073 Solanum tuberosum HOM05D006685 ORTHO05D008244 5.9e-74 283.1 740 32.2
A01p24130 Brassica napus HOM05D006685 ORTHO05D008244 3.8e-73 280.4 723 30.4
Aa31LG4G18660 Aethionema arabicum HOM05D006685 ORTHO05D008244 3.2e-72 277.3 759 29.8
PSO541G3044 Papaver somniferum HOM05D006685 ORTHO05D008244 3.2e-72 277.3 738 31.0
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 2.7e-71 274.2 702 30.9
Migut.H00483 Erythranthe guttata HOM05D006685 ORTHO05D008244 3.9e-70 270.4 716 31.6
PGR119G2375 Punica granatum HOM05D006685 ORTHO05D008244 6.7e-70 269.6 726 32.1
Peaxi162Scf00993g00018 Petunia axillaris HOM05D006685 ORTHO05D008244 4.4e-69 266.9 626 33.9
THA.LOC104821263 Tarenaya hassleriana HOM05D006685 ORTHO05D008244 7.4e-69 266.2 650 32.0
Cpa.g.sc76.25 Carica papaya HOM05D006685 ORTHO05D008244 2.8e-68 264.2 412 40.0
Carub.0005s1677 Capsella rubella HOM05D006685 ORTHO05D008244 9.1e-67 259.2 535 33.5
Haze_15195 Corylus avellana HOM05D006685 ORTHO05D008244 1.9e-64 251.5 745 29.0
Lsat_1_v5_gn_3_92360 Lactuca sativa HOM05D006685 ORTHO05D008244 3.2e-64 250.8 709 30.6
ECA246G1174 Erigeron canadensis HOM05D006685 ORTHO05D008244 1.4e-62 245.4 725 30.3
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 6.7e-62 243.0 613 31.2
BcaC09g50030 Brassica carinata HOM05D006685 ORTHO05D008244 1.2e-61 242.3 614 31.6
SGA_v2.0_scaffold204G41611 Striga asiatica HOM05D006685 ORTHO05D008244 3.5e-58 230.7 670 29.0
arahy.Tifrunner.gnm1.ann1.5EE2XW Arachis hypogaea HOM05D006685 ORTHO05D008244 2.7e-55 221.1 395 38.0
AUR62003829 Chenopodium quinoa HOM05D006685 ORTHO05D008244 7.5e-53 213.0 463 33.9
ATR0733G107 Amborella trichopoda HOM05D006685 ORTHO05D008244 2.4e-51 208.0 729 27.2
HPP92_017771 Vanilla planifolia HOM05D006685 ORTHO05D008244 7.0e-51 206.5 708 27.5
PGR044G2727 Punica granatum HOM05D006685 ORTHO05D008244 2.7e-50 204.5 454 34.1
Zm00001eb209650 Zea mays HOM05D006685 ORTHO05D008244 1.2e-47 195.7 694 26.4
Zm00001eb209640 Zea mays HOM05D006685 ORTHO05D008244 1.6e-47 195.3 694 26.4
AUR62001974 Chenopodium quinoa HOM05D006685 ORTHO05D008244 3.7e-44 184.1 712 26.8
Os07g0120700 Oryza sativa ssp. japonica HOM05D006685 ORTHO05D008244 2.4e-43 181.4 669 28.4
CSS0022206 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 4.1e-43 180.6 339 33.0
Oeu003945.1 Olea europaea HOM05D006685 ORTHO05D008244 7.0e-43 179.9 387 35.4
MD06G1092200 Malus domestica HOM05D006685 ORTHO05D008244 5.0e-41 173.7 329 39.2
unitig_749.g14219 Utricularia gibba HOM05D006685 ORTHO05D008244 3.5e-34 151.0 408 30.9
CDE07G0460 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 8.1e-23 113.2 384 26.8
GSVIVG01036190001 Vitis vinifera HOM05D006685 ORTHO05D008244 8.1e-23 113.2 175 41.1
FAN28G0437 Fragaria x ananassa HOM05D006685 ORTHO05D008244 9.2e-19 99.8 204 33.8
GSVIVG01002723001 Vitis vinifera HOM05D006685 ORTHO05D008244 8.9e-14 83.2 147 36.7
SEGI_02281 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 1.7e-12 79.0 407 26.0
ATR0733G174 Amborella trichopoda HOM05D006685 ORTHO05D008244 6.4e-12 77.0 141 36.9
Pp3c3_30590 Physcomitrium patens HOM05D006685 ORTHO05D008244 1.4e-11 75.9 727 21.7
MD06G1092300 Malus domestica HOM05D006685 ORTHO05D008244 1.2e-07 62.8 70 47.1
Mapoly0122s0032 Marchantia polymorpha HOM05D006685 ORTHO05D008244 1.2e-07 62.8 504 22.4
FAN05G3710 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.8e-07 61.6 71 47.9
FAN08G2647 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.8e-07 61.6 71 47.9


User provided reference genes

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