Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 1.7e-64 249.2 129 100.0
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 3.4e-57 224.9 129 92.2
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 2.0e-41 172.6 129 76.0
ClCG03G001590 Citrullus lanatus HOM05D005967 ORTHO05D005174 2.3e-32 142.5 110 70.9
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 1.2e-20 103.6 142 47.2
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 7.5e-20 100.9 152 45.4
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 7.5e-20 100.9 164 43.9
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 1.4e-18 96.7 147 44.9
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 3.2e-18 95.5 168 39.9
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 4.1e-18 95.1 79 60.8
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 2.7e-17 92.4 146 43.2
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 1.3e-16 90.1 76 52.6
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.7e-16 89.7 149 43.6
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 2.3e-16 89.4 161 39.1
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 3.0e-16 89.0 140 44.3
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 5.6e-15 84.7 158 41.1
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 5.6e-15 84.7 77 58.4
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 2.1e-14 82.8 97 46.4
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 2.1e-14 82.8 81 55.6
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 2.8e-14 82.4 73 58.9
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 2.8e-14 82.4 152 39.5
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 4.7e-14 81.6 78 55.1
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 4.7e-14 81.6 74 59.5
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 6.2e-14 81.3 150 42.7
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 8.0e-14 80.9 98 45.9
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.1e-13 80.5 79 55.7
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 1.4e-13 80.1 75 54.7
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 1.4e-13 80.1 151 37.7
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.3e-13 79.3 160 35.0
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 4.0e-13 78.6 139 38.8
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 4.0e-13 78.6 142 39.4
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 4.0e-13 78.6 98 42.9
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 4.0e-13 78.6 99 43.4
DCAR_005974 Daucus carota HOM05D005967 ORTHO05D005174 8.9e-13 77.4 103 46.6
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 1.2e-12 77.0 84 52.4
Prupe.6G078900 Prunus persica HOM05D005967 ORTHO05D005174 2.0e-12 76.3 165 37.6
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 3.4e-12 75.5 98 41.8
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 5.8e-12 74.7 76 52.6
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 7.5e-12 74.3 81 51.9
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 7.5e-12 74.3 77 48.1
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 9.8e-12 73.9 145 37.9
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 1.3e-11 73.6 81 51.9
MD11G1110400 Malus domestica HOM05D005967 ORTHO05D005174 1.3e-11 73.6 160 39.4
FAN11G1916 Fragaria x ananassa HOM05D005967 ORTHO05D005174 2.2e-11 72.8 75 58.7
FAN16G3022 Fragaria x ananassa HOM05D005967 ORTHO05D005174 2.2e-11 72.8 75 58.7
FAN21G3710 Fragaria x ananassa HOM05D005967 ORTHO05D005174 2.2e-11 72.8 75 58.7
Glyma.13G335500 Glycine max HOM05D005967 ORTHO05D005174 2.2e-11 72.8 79 50.6
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 2.9e-11 72.4 131 44.3
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 2.9e-11 72.4 80 50.0
MD03G1095400 Malus domestica HOM05D005967 ORTHO05D005174 2.9e-11 72.4 79 58.2
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 3.7e-11 72.0 79 51.9
FvH4_3g35950 Fragaria vesca HOM05D005967 ORTHO05D005174 8.3e-11 70.9 75 57.3
RcHm_v2.0_Chr5g0064301 Rosa chinensis HOM05D005967 ORTHO05D005174 8.3e-11 70.9 75 57.3
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 1.1e-10 70.5 77 55.8
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 1.1e-10 70.5 77 55.8
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 1.1e-10 70.5 77 55.8
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 1.1e-10 70.5 96 44.8
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 1.4e-10 70.1 163 34.4
FAN25G3118 Fragaria x ananassa HOM05D005967 ORTHO05D005174 1.9e-10 69.7 75 57.3
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 1.9e-10 69.7 90 47.8
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.9e-10 69.7 77 54.5
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 2.4e-10 69.3 88 47.7
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.4e-10 69.3 91 44.0
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 2.4e-10 69.3 91 44.0
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 4.1e-10 68.6 94 42.6
VMungo1080G1048 Vigna mungo HOM05D005967 ORTHO05D005174 7.0e-10 67.8 76 50.0
Ca_28209_v3 Cicer arietinum L. HOM05D005967 ORTHO05D005174 9.2e-10 67.4 78 52.6
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 1.6e-09 66.6 99 44.4
Eucgr.B02374 Eucalyptus grandis HOM05D005967 ORTHO05D005174 2.7e-09 65.9 77 48.1
Oeu019207.1 Olea europaea HOM05D005967 ORTHO05D005174 2.7e-09 65.9 129 38.0
Phvul.L004943 Phaseolus vulgaris HOM05D005967 ORTHO05D005174 2.7e-09 65.9 75 46.7
TPR.G5598 Trifolium pratense HOM05D005967 ORTHO05D005174 3.5e-09 65.5 101 36.6
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 4.6e-09 65.1 147 34.7
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 4.6e-09 65.1 82 50.0
MSTRG.5669 Avicennia marina HOM05D005967 ORTHO05D005174 1.0e-08 63.9 88 44.3
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 1.0e-08 63.9 76 47.4
SGA_v2.0_scaffold126G33790 Striga asiatica HOM05D005967 ORTHO05D005174 1.0e-08 63.9 82 40.2
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 1.3e-08 63.5 113 43.4
Peaxi162Scf00679g00042 Petunia axillaris HOM05D005967 ORTHO05D014046 1.3e-08 63.5 95 40.0
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 1.7e-08 63.2 133 34.6
Prupe.6G254000 Prunus persica HOM05D005967 ORTHO05D005174 1.7e-08 63.2 83 43.4
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.7e-08 63.2 109 40.4
Lj3g0001714 Lotus japonicus HOM05D005967 ORTHO05D005174 3.0e-08 62.4 115 38.3
Oeu011403.1 Olea europaea HOM05D005967 ORTHO05D005174 3.0e-08 62.4 112 40.2
VMungo1309G2816 Vigna mungo HOM05D005967 ORTHO05D005174 3.9e-08 62.0 71 45.1
Oeu054156.1 Olea europaea HOM05D005967 ORTHO05D005174 5.0e-08 61.6 83 45.8
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 6.6e-08 61.2 79 41.8
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 8.6e-08 60.8 127 34.6
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 8.6e-08 60.8 92 42.4
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 8.6e-08 60.8 76 48.7
TWI53G1171 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.1e-07 60.5 96 47.9
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 1.5e-07 60.1 103 38.8
MSTRG.19086 Avicennia marina HOM05D005967 ORTHO05D005174 3.3e-07 58.9 67 50.7
EL10As1g23034 Beta vulgaris HOM05D005967 ORTHO05D005174 3.3e-07 58.9 94 42.6
Lj3g0014047 Lotus japonicus HOM05D005967 ORTHO05D005174 3.3e-07 58.9 107 36.4
Nitab4.5_0004094g0010 Nicotiana tabacum HOM05D005967 ORTHO05D005174 3.3e-07 58.9 75 46.7
Peaxi162Scf00832g00006 Petunia axillaris HOM05D030065 ORTHO05D005174 3.3e-07 58.9 109 37.6
Oeu024352.1 Olea europaea HOM05D005967 ORTHO05D005174 4.3e-07 58.5 95 42.1
Gohir.A04G082200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 9.5e-07 57.4 69 47.8
Migut.N02671 Erythranthe guttata HOM05D005967 ORTHO05D005174 2.8e-06 55.8 72 44.4
Sc01g0004310 Simmondsia chinensis HOM05D005967 ORTHO05D005174 2.8e-06 55.8 80 40.0
THA.LOC104827013 Tarenaya hassleriana HOM05D010528 ORTHO05D005174 2.8e-06 55.8 68 48.5
Glyma.18G177800 Glycine max HOM05D005967 ORTHO05D005174 3.6e-06 55.5 63 49.2
Psat0s8791g0040 Pisum sativum HOM05D005967 ORTHO05D005174 4.7e-06 55.1 85 42.4
TAR636G2062 Trochodendron aralioides HOM05D000645 ORTHO05D000494 8.1e-06 54.3 138 33.3


User provided reference genes

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