Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C020622.2 Cucumis melo HOM05D004332 ORTHO05D005116 3.9e-69 264.6 128 100.0
ClCG03G001410 Citrullus lanatus HOM05D004332 ORTHO05D005116 8.1e-67 256.9 128 93.8
CsaV3_1G034360 Cucumis sativus L. HOM05D004332 ORTHO05D005116 9.0e-66 253.4 128 96.1
Sed0025770 Sechium edule HOM05D004332 ORTHO05D005116 1.7e-64 249.2 128 89.8
Sed0019241 Sechium edule HOM05D004332 ORTHO05D005116 9.3e-63 243.4 128 87.5
CANSAT54G0234 Cannabis sativa HOM05D004332 ORTHO05D005116 2.0e-57 225.7 128 80.5
arahy.Tifrunner.gnm1.ann1.KAW7XL Arachis hypogaea HOM05D004332 ORTHO05D005116 3.8e-56 221.5 128 79.7
Prupe.6G074300 Prunus persica HOM05D004332 ORTHO05D005116 4.9e-56 221.1 133 78.2
MD03G1090100 Malus domestica HOM05D004332 ORTHO05D005116 3.2e-55 218.4 132 76.5
QL01p031517 Quercus lobata HOM05D004332 ORTHO05D005116 1.2e-54 216.5 128 78.1
TWI31G0816 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 1.2e-54 216.5 129 78.3
CiPaw.13G092600 Carya illinoinensis HOM05D004332 ORTHO05D005116 3.5e-54 214.9 128 75.8
Lalb_Chr03g0026581 Lupinus albus HOM05D004332 ORTHO05D005116 4.6e-54 214.5 128 75.8
MD11G1099700 Malus domestica HOM05D004332 ORTHO05D005116 4.6e-54 214.5 134 74.6
Lalb_Chr19g0137881 Lupinus albus HOM05D004332 ORTHO05D005116 1.0e-53 213.4 128 76.6
CiPaw.14G067900 Carya illinoinensis HOM05D004332 ORTHO05D005116 1.8e-53 212.6 128 75.8
Glyma.11G138900 Glycine max HOM05D004332 ORTHO05D005116 2.3e-53 212.2 128 76.6
Actinidia37195 Actinidia chinensis HOM05D004332 ORTHO05D005116 3.0e-53 211.8 128 78.1
TPR.G34281 Trifolium pratense HOM05D004332 ORTHO05D005116 3.0e-53 211.8 128 76.6
GSVIVG01024938001 Vitis vinifera HOM05D004332 ORTHO05D005116 3.9e-53 211.5 130 76.9
Manes.01G172400 Manihot esculenta HOM05D004332 ORTHO05D005116 6.7e-53 210.7 130 74.6
MELO3C025906.2 Cucumis melo HOM05D004332 ORTHO05D005116 8.7e-53 210.3 130 76.2
Glyma.12G062500 Glycine max HOM05D004332 ORTHO05D005116 8.7e-53 210.3 128 75.0
Manes.02G131400 Manihot esculenta HOM05D004332 ORTHO05D005116 8.7e-53 210.3 130 76.2
RcHm_v2.0_Chr5g0065351 Rosa chinensis HOM05D004332 ORTHO05D005116 8.7e-53 210.3 127 79.5
TWI75G0441 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 8.7e-53 210.3 129 76.0
CsaV3_6G016760 Cucumis sativus L. HOM05D004332 ORTHO05D005116 1.1e-52 209.9 130 75.4
Dinv17021 Davidia involucrata HOM05D004332 ORTHO05D005116 1.1e-52 209.9 131 74.8
Dinv42969 Davidia involucrata HOM05D004332 ORTHO05D005116 1.1e-52 209.9 131 74.8
Dinv43130 Davidia involucrata HOM05D004332 ORTHO05D005116 1.1e-52 209.9 131 74.8
Hma1.2p1_0615F.1_g189860 Hydrangea macrophylla HOM05D004332 ORTHO05D005116 1.1e-52 209.9 128 75.0
Sed0013921 Sechium edule HOM05D004332 ORTHO05D005116 1.1e-52 209.9 130 75.4
CSS0035025 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 1.9e-52 209.1 131 75.6
ClCG02G020050 Citrullus lanatus HOM05D004332 ORTHO05D005116 2.5e-52 208.8 129 76.0
Dinv04179 Davidia involucrata HOM05D004332 ORTHO05D005116 4.3e-52 208.0 131 74.8
COL.COLO4_18528 Corchorus olitorius HOM05D004332 ORTHO05D005116 7.4e-52 207.2 130 74.6
FAN25G2250 Fragaria x ananassa HOM05D004332 ORTHO05D005116 9.6e-52 206.8 129 77.5
Phvul.011G063600 Phaseolus vulgaris HOM05D004332 ORTHO05D005116 9.6e-52 206.8 128 76.6
Sp6g21090 Schrenkiella parvula HOM05D004332 ORTHO05D005116 9.6e-52 206.8 128 75.0
Ciclev10029562m.g Citrus clementina HOM05D004332 ORTHO05D005116 1.3e-51 206.5 134 73.1
FvH4_3g36490 Fragaria vesca HOM05D004332 ORTHO05D005116 1.3e-51 206.5 129 77.5
FAN11G3576 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.3e-51 206.5 129 77.5
FAN16G1081 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.3e-51 206.5 129 76.7
SGA_v2.0_scaffold132G34538 Striga asiatica HOM05D004332 ORTHO05D005116 1.3e-51 206.5 131 71.8
Gohir.A03G043200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.1e-51 205.7 130 73.8
VMungo1127G1024 Vigna mungo HOM05D004332 ORTHO05D005116 2.1e-51 205.7 128 76.6
Gohir.A05G094800 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.8e-51 205.3 130 73.8
Gohir.D05G095080 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.8e-51 205.3 130 73.8
Lj3g0024178 Lotus japonicus HOM05D004332 ORTHO05D005116 3.7e-51 204.9 128 75.8
Eucgr.J02045 Eucalyptus grandis HOM05D004332 ORTHO05D005116 4.8e-51 204.5 133 73.7
Gohir.D03G124100 Gossypium hirsutum HOM05D004332 ORTHO05D005116 4.8e-51 204.5 130 72.3
Gohir.D05G095200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 4.8e-51 204.5 130 73.8
HanXRQChr08g0237001 Helianthus annuus HOM05D004332 ORTHO05D005116 4.8e-51 204.5 129 77.5
Rhsim01G0229500 Rhododendron simsii HOM05D004332 ORTHO05D005116 4.8e-51 204.5 129 75.2
Thecc.09G319900 Theobroma cacao HOM05D004332 ORTHO05D005116 6.2e-51 204.1 130 73.8
AUR62009559 Chenopodium quinoa HOM05D004332 ORTHO05D005116 8.2e-51 203.8 128 73.4
Cc01_g13020 Coffea canephora HOM05D004332 ORTHO05D005116 8.2e-51 203.8 129 75.2
Duzib150G0187 Durio zibethinus HOM05D004332 ORTHO05D005116 8.2e-51 203.8 128 74.2
Oeu017398.1 Olea europaea HOM05D004332 ORTHO05D005116 8.2e-51 203.8 132 72.0
unitig_6.g29275 Utricularia gibba HOM05D004332 ORTHO05D005116 8.2e-51 203.8 130 73.1
unitig_747.g21434 Utricularia gibba HOM05D004332 ORTHO05D005116 8.2e-51 203.8 130 73.1
Lsat_1_v5_gn_9_23661 Lactuca sativa HOM05D004332 ORTHO05D005116 1.1e-50 203.4 129 74.4
Psat5g286720 Pisum sativum HOM05D004332 ORTHO05D005116 1.1e-50 203.4 128 75.0
Gohir.D07G103500 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.4e-50 203.0 128 73.4
Actinidia34413 Actinidia chinensis HOM05D004332 ORTHO05D005116 1.8e-50 202.6 131 74.0
Hund04945 Selenicereus undatus HOM05D004332 ORTHO05D005116 1.8e-50 202.6 128 73.4
Carub.0008s2008 Capsella rubella HOM05D004332 ORTHO05D005116 3.1e-50 201.8 132 72.7
Migut.N00901 Erythranthe guttata HOM05D004332 ORTHO05D005116 3.1e-50 201.8 131 70.2
Ah.08g219640 Amaranthus hybridus HOM05D004332 ORTHO05D005116 4.1e-50 201.4 128 72.7
Gorai.003G130800 Gossypium raimondii HOM05D004332 ORTHO05D005116 4.1e-50 201.4 131 71.8
Gorai.009G098500 Gossypium raimondii HOM05D004332 ORTHO05D005116 5.3e-50 201.1 130 73.1
Oeu064111.2 Olea europaea HOM05D004332 ORTHO05D005116 5.3e-50 201.1 129 69.8
TAR633G2148 Trochodendron aralioides HOM05D004332 ORTHO05D005116 5.3e-50 201.1 128 71.9
AUR62001771 Chenopodium quinoa HOM05D004332 ORTHO05D005116 6.9e-50 200.7 128 72.7
Duzib168G2052 Durio zibethinus HOM05D004332 ORTHO05D005116 6.9e-50 200.7 130 71.5
Sc12g0001450 Simmondsia chinensis HOM05D004332 ORTHO05D005116 6.9e-50 200.7 128 73.4
CARHR285780 Cardamine hirsuta HOM05D004332 ORTHO05D005116 9.0e-50 200.3 132 73.5
arahy.Tifrunner.gnm1.ann1.WMUR0J Arachis hypogaea HOM05D004332 ORTHO05D005116 1.2e-49 199.9 115 79.1
CSS0027892 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 1.2e-49 199.9 133 72.2
AL8G35880 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 1.5e-49 199.5 131 74.0
SalBow2G0012 Salvia bowleyana HOM05D004332 ORTHO05D005116 1.5e-49 199.5 134 67.9
Rhsim13G0081500 Rhododendron simsii HOM05D004332 ORTHO05D005116 2.0e-49 199.1 129 72.9
EL10Ac7g16034 Beta vulgaris HOM05D004332 ORTHO05D005116 2.6e-49 198.7 128 71.9
Thhalv10015001m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 2.6e-49 198.7 132 73.5
AT5G59410 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 3.4e-49 198.4 131 72.5
THA.LOC104814879 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 3.4e-49 198.4 129 71.3
Oeu002423.1 Olea europaea HOM05D004332 ORTHO05D005116 4.5e-49 198.0 131 70.2
ECA247G3838 Erigeron canadensis HOM05D004332 ORTHO05D005116 7.6e-49 197.2 127 72.4
Medtr2g097270 Medicago truncatula HOM05D004332 ORTHO05D005116 1.0e-48 196.8 128 71.9
Nitab4.5_0000463g0140 Nicotiana tabacum HOM05D004332 ORTHO05D005116 1.0e-48 196.8 130 72.3
Potri.001G241500 Populus trichocarpa HOM05D004332 ORTHO05D005116 1.0e-48 196.8 133 72.2
Nn2g11136 Nelumbo nucifera HOM05D004332 ORTHO05D005116 1.3e-48 196.4 128 68.0
Nitab4.5_0001326g0120 Nicotiana tabacum HOM05D004332 ORTHO05D005116 1.3e-48 196.4 130 72.3
Potri.009G032100 Populus trichocarpa HOM05D004332 ORTHO05D005116 1.3e-48 196.4 134 70.9
PGR102G2585 Punica granatum HOM05D004332 ORTHO05D005116 3.8e-48 194.9 130 71.5
CARHR122250 Cardamine hirsuta HOM05D004332 ORTHO05D005116 5.0e-48 194.5 133 68.4
Gohir.A07G099000 Gossypium hirsutum HOM05D004332 ORTHO05D005116 6.5e-48 194.1 130 71.5
MBI05_g28381_MAGBIO Magnolia biondii HOM05D004332 ORTHO05D005116 8.4e-48 193.7 129 69.0
Sc21g0005870 Simmondsia chinensis HOM05D004332 ORTHO05D005116 1.9e-47 192.6 128 72.7
ATR0559G209 Amborella trichopoda HOM05D004332 ORTHO05D005116 2.5e-47 192.2 129 69.8
PGSC0003DMG400030417 Solanum tuberosum HOM05D004332 ORTHO05D005116 2.5e-47 192.2 120 75.0
Aa31sc23G410 Aethionema arabicum HOM05D004332 ORTHO05D005116 3.2e-47 191.8 132 70.5
Gorai.001G111400 Gossypium raimondii HOM05D004332 ORTHO05D005116 3.2e-47 191.8 121 72.7
Sabra16G0146000 Salix brachista HOM05D004332 ORTHO05D005116 4.2e-47 191.4 145 67.6
CAN.G394.64 Capsicum annuum HOM05D004332 ORTHO05D005116 9.3e-47 190.3 127 70.9
Aa31LG5G7210 Aethionema arabicum HOM05D004332 ORTHO05D005116 1.6e-46 189.5 133 64.7
Thhalv10017410m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 1.6e-46 189.5 133 66.2
Solyc06g076260.3 Solanum lycopersicum HOM05D004332 ORTHO05D005116 1.6e-46 189.5 120 72.5
vmacro14542 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 1.6e-46 189.5 117 76.1
AL146U10030 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 2.1e-46 189.1 133 66.9
Carub.0004s1001 Capsella rubella HOM05D004332 ORTHO05D005116 2.1e-46 189.1 133 66.9
THA.LOC104810775 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 2.7e-46 188.7 129 69.0
CDE04G0625 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 3.5e-46 188.3 128 65.6
AT2G29020 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 1.0e-45 186.8 134 64.9
BraA04t17767Z Brassica rapa HOM05D004332 ORTHO05D005116 1.0e-45 186.8 133 65.4
A04p21990 Brassica napus HOM05D004332 ORTHO05D005116 1.3e-45 186.4 133 64.7
Sp4g11830 Schrenkiella parvula HOM05D004332 ORTHO05D005116 2.3e-45 185.7 133 64.7
THA.LOC104826319 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 5.1e-45 184.5 133 66.9
BcaB06g28270 Brassica carinata HOM05D004332 ORTHO05D005116 6.7e-45 184.1 133 63.9
BcaC02g08120 Brassica carinata HOM05D004332 ORTHO05D005116 6.7e-45 184.1 133 63.2
C04p58150 Brassica napus HOM05D004332 ORTHO05D005116 6.7e-45 184.1 133 63.2
CDE07G0755 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 6.7e-45 184.1 128 63.3
DCAR_018915 Daucus carota HOM05D004332 ORTHO05D005116 8.7e-45 183.7 119 71.4
BcaB02g10224 Brassica carinata HOM05D004332 ORTHO05D005116 1.1e-44 183.3 134 63.4
BolC4t27343H Brassica oleracea HOM05D004332 ORTHO05D005116 1.1e-44 183.3 133 63.2
Atru.chr3.3947 Acer truncatum HOM05D004332 ORTHO05D005116 1.9e-44 182.6 136 66.9
Sabra09G0022800 Salix brachista HOM05D004332 ORTHO05D005116 2.5e-44 182.2 123 70.7
BcaC02g11036 Brassica carinata HOM05D004332 ORTHO05D005116 3.3e-44 181.8 134 62.7
C04p21940 Brassica napus HOM05D004332 ORTHO05D005116 3.3e-44 181.8 134 62.7
BolC4t23714H Brassica oleracea HOM05D004332 ORTHO05D005116 3.3e-44 181.8 134 62.7
TAR636G3330 Trochodendron aralioides HOM05D004332 ORTHO05D005116 3.3e-44 181.8 115 73.0
A07p19440 Brassica napus HOM05D004332 ORTHO05D005116 4.3e-44 181.4 134 62.7
THA.LOC104800671 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 4.3e-44 181.4 132 63.6
Aqoxy1G00923 Aquilegia oxysepala HOM05D004332 ORTHO05D005116 7.4e-44 180.6 112 72.3
BraA07t29650Z Brassica rapa HOM05D004332 ORTHO05D005116 7.4e-44 180.6 134 61.9
PSO151G0214 Papaver somniferum HOM05D004332 ORTHO05D005116 7.4e-44 180.6 128 64.8
arahy.Tifrunner.gnm1.ann1.TT4C38 Arachis hypogaea HOM05D004332 ORTHO05D005116 9.7e-44 180.3 125 68.8
PSO339G1935 Papaver somniferum HOM05D004332 ORTHO05D005116 9.7e-44 180.3 122 66.4
Lsat_1_v5_gn_8_73521 Lactuca sativa HOM05D004332 ORTHO05D005116 2.8e-43 178.7 116 71.6
SEGI_11468 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 3.7e-43 178.3 130 63.1
arahy.Tifrunner.gnm1.ann1.A22IES Arachis hypogaea HOM05D004332 ORTHO05D005116 1.1e-42 176.8 124 67.7
Os05g0110600 Oryza sativa ssp. japonica HOM05D004332 ORTHO05D005116 1.3e-40 169.9 128 63.3
HanXRQChr07g0197291 Helianthus annuus HOM05D004332 ORTHO05D005116 1.1e-39 166.8 137 61.3
Zm00001eb266910 Zea mays HOM05D004332 ORTHO05D005116 1.9e-39 166.0 131 61.1
Mapoly0045s0062 Marchantia polymorpha HOM05D004332 ORTHO05D005116 1.8e-37 159.5 117 59.0
SMO304G0081 Selaginella moellendorffii HOM05D004332 ORTHO05D005116 6.7e-37 157.5 119 58.0
Nn2g13368 Nelumbo nucifera HOM05D004332 ORTHO05D005116 2.2e-35 152.5 91 75.8
Pp3c16_16760 Physcomitrium patens HOM05D004332 ORTHO05D005116 3.7e-35 151.8 115 60.9
AagrBONN_evm.TU.Sc2ySwM_228.3328 Anthoceros agrestis HOM05D004332 ORTHO05D005116 9.1e-34 147.1 124 58.1
Pp3c6_17300 Physcomitrium patens HOM05D004332 ORTHO05D005116 9.4e-31 137.1 118 53.4
Haze_24115 Corylus avellana HOM05D004332 ORTHO05D005116 6.7e-29 131.0 74 77.0
Sopen06g032690 Solanum pennellii HOM05D004332 ORTHO05D005116 2.0e-28 129.4 78 75.6
Actinidia07026 Actinidia chinensis HOM05D004332 ORTHO05D005116 6.3e-27 124.4 85 74.1
FAN21G1178 Fragaria x ananassa HOM05D004332 ORTHO05D005116 2.2e-24 115.9 73 74.0
vmacro03061 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 2.9e-24 115.5 79 65.8
AL4G23580 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 9.4e-23 110.5 77 66.2
TAR369G0503 Trochodendron aralioides HOM05D004332 ORTHO05D005116 4.0e-21 105.1 73 61.6
SEGI_12680 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 1.3e-19 100.1 81 53.1
Peaxi162Scf00774g00129 Petunia axillaris HOM05D004332 ORTHO05D005116 2.8e-19 99.0 56 82.1
Actinidia23932 Actinidia chinensis HOM05D004332 ORTHO05D005116 4.5e-17 91.7 60 73.3
HPP92_028206 Vanilla planifolia HOM05D004332 ORTHO05D005116 2.6e-12 75.9 54 59.3
SHI47893 Sapria himalayana HOM05D004332 ORTHO05D005116 5.7e-12 74.7 50 66.0
Cre08.g376000 Chlamydomonas reinhardtii HOM05D004332 ORTHO05D005116 3.1e-10 68.9 95 32.6
Eucgr.H02119 Eucalyptus grandis HOM05D004332 ORTHO05D005116 1.9e-07 59.7 38 68.4


User provided reference genes

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