Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C020581.2 Cucumis melo HOM05D005457 ORTHO05D006350 0.0e+00 2154.8 1178 100.0
CsaV3_1G035890 Cucumis sativus L. HOM05D005457 ORTHO05D006350 0.0e+00 1973.0 1074 94.6
ClCG03G001030 Citrullus lanatus HOM05D005457 ORTHO05D006350 0.0e+00 1825.8 1177 83.4
Sed0019872 Sechium edule HOM05D005457 ORTHO05D006350 0.0e+00 1348.6 1084 69.1
Haze_24232 Corylus avellana HOM05D005457 ORTHO05D006350 1.7e-155 554.7 1148 39.6
Dinv34321 Davidia involucrata HOM05D005457 ORTHO05D006350 1.8e-152 544.7 1195 38.9
Prupe.6G064800 Prunus persica HOM05D005457 ORTHO05D006350 4.6e-148 530.0 1198 39.4
QL01p028955 Quercus lobata HOM05D005457 ORTHO05D006350 4.9e-142 510.0 1231 40.1
CiPaw.13G084000 Carya illinoinensis HOM05D005457 ORTHO05D006350 1.2e-132 478.8 1239 38.4
Atru.chr3.4038 Acer truncatum HOM05D005457 ORTHO05D006350 2.8e-129 467.6 1117 37.7
Dinv17076 Davidia involucrata HOM05D005457 ORTHO05D006350 3.8e-126 457.2 1096 37.9
Dinv43020 Davidia involucrata HOM05D005457 ORTHO05D006350 3.8e-126 457.2 1096 37.9
Dinv43077 Davidia involucrata HOM05D005457 ORTHO05D006350 3.8e-126 457.2 1096 37.9
Ciclev10027683m.g Citrus clementina HOM05D005457 ORTHO05D006350 2.3e-123 448.0 1107 36.9
FvH4_3g37470 Fragaria vesca HOM05D005457 ORTHO05D006350 1.4e-120 438.7 1097 36.1
MD11G1084500 Malus domestica HOM05D005457 ORTHO05D006350 2.2e-118 431.4 1030 36.3
Hma1.2p1_0543F.1_g175290 Hydrangea macrophylla HOM05D005457 ORTHO05D006350 1.9e-117 428.3 1176 36.6
FAN25G1264 Fragaria x ananassa HOM05D005457 ORTHO05D006350 9.3e-117 426.0 1110 35.5
Manes.02G123500 Manihot esculenta HOM05D005457 ORTHO05D006350 6.0e-116 423.3 1149 35.9
FAN11G1716 Fragaria x ananassa HOM05D005457 ORTHO05D006350 1.3e-115 422.2 1115 35.2
GSVIVG01024823001 Vitis vinifera HOM05D005457 ORTHO05D006350 8.2e-113 412.9 1087 35.8
FAN21G0431 Fragaria x ananassa HOM05D005457 ORTHO05D006350 8.4e-110 402.9 1107 34.2
MD03G1079900 Malus domestica HOM05D005457 ORTHO05D006350 3.5e-108 397.5 1054 35.2
Thecc.09G309000 Theobroma cacao HOM05D005457 ORTHO05D006350 1.8e-104 385.2 1116 35.7
Potri.009G040500 Populus trichocarpa HOM05D005457 ORTHO05D006350 1.7e-102 378.6 1145 34.3
CSS0035455 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 2.9e-102 377.9 1198 34.1
FAN16G3594 Fragaria x ananassa HOM05D005457 ORTHO05D006350 8.5e-102 376.3 1091 34.1
Sabra09G0028400 Salix brachista HOM05D005457 ORTHO05D006350 3.7e-97 360.9 1098 32.1
Lj1C143T9 Lonicera japonica HOM05D005457 ORTHO05D006350 3.1e-96 357.8 1135 34.4
Gorai.003G125700 Gossypium raimondii HOM05D005457 ORTHO05D006350 1.1e-90 339.3 1102 33.7
RcHm_v2.0_Chr5g0067361 Rosa chinensis HOM05D005457 ORTHO05D006350 9.1e-88 329.7 416 51.0
Rhsim13G0075000 Rhododendron simsii HOM05D005457 ORTHO05D006350 1.2e-87 329.3 1133 33.5
Gohir.D03G119400 Gossypium hirsutum HOM05D005457 ORTHO05D006350 2.0e-87 328.6 1101 33.1
Potri.001G247100 Populus trichocarpa HOM05D005457 ORTHO05D006350 2.9e-86 324.7 1254 32.6
Gorai.003G125900 Gossypium raimondii HOM05D005457 ORTHO05D006350 8.5e-86 323.2 1097 32.4
Gohir.D03G119500 Gossypium hirsutum HOM05D005457 ORTHO05D006350 7.2e-85 320.1 1089 32.6
Phvul.011G009900 Phaseolus vulgaris HOM05D005457 ORTHO05D006350 2.3e-83 315.1 1103 31.4
Actinidia25123 Actinidia chinensis HOM05D005457 ORTHO05D006350 3.3e-82 311.2 989 32.8
TAR369G0749 Trochodendron aralioides HOM05D005457 ORTHO05D006350 3.7e-81 307.8 1323 31.0
CSS0006949 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 8.5e-78 296.6 1085 32.5
vmacro03007 Vaccinium macrocarpon HOM05D005457 ORTHO05D006350 8.5e-78 296.6 1093 32.5
Lj2A1073T53 Lonicera japonica HOM05D005457 ORTHO05D006350 1.8e-75 288.9 1182 31.6
Gohir.A03G047600 Gossypium hirsutum HOM05D005457 ORTHO05D006350 6.7e-75 287.0 1114 32.0
Glyma.12G007800 Glycine max HOM05D005457 ORTHO05D006350 2.0e-74 285.4 1111 29.8
Eucgr.B02283 Eucalyptus grandis HOM05D005457 ORTHO05D006350 7.5e-74 283.5 1124 32.3
VMungo1127G1417 Vigna mungo HOM05D005457 ORTHO05D006350 2.2e-73 282.0 1108 31.6
Gohir.A03G047700 Gossypium hirsutum HOM05D005457 ORTHO05D006350 5.3e-72 277.3 983 31.4
Sc12g0001060 Simmondsia chinensis HOM05D005457 ORTHO05D006350 7.0e-72 276.9 622 36.8
Cc00_g21960 Coffea canephora HOM05D005457 ORTHO05D006350 1.5e-69 269.2 1136 30.5
Lalb_Chr01g0000381 Lupinus albus HOM05D005457 ORTHO05D006350 1.0e-67 263.1 1099 29.0
arahy.Tifrunner.gnm1.ann1.L17SH6 Arachis hypogaea HOM05D005457 ORTHO05D006350 5.2e-67 260.8 1195 32.9
Hund11609 Selenicereus undatus HOM05D005457 ORTHO05D006350 3.4e-66 258.1 1153 29.3
Nn2g13569 Nelumbo nucifera HOM05D005457 ORTHO05D006350 2.8e-65 255.0 1320 29.5
EL10Ac7g16099 Beta vulgaris HOM05D005457 ORTHO05D006350 8.3e-65 253.4 1147 30.6
Solyc09g031650.3 Solanum lycopersicum HOM05D005457 ORTHO05D006350 8.6e-62 243.4 1124 29.5
Aqoxy1G00759 Aquilegia oxysepala HOM05D005457 ORTHO05D006350 5.5e-61 240.7 1154 31.1
Sopen09g014590 Solanum pennellii HOM05D005457 ORTHO05D006350 5.5e-61 240.7 1124 29.4
Lj3g0007084 Lotus japonicus HOM05D005457 ORTHO05D006350 2.8e-60 238.4 1091 30.1
arahy.Tifrunner.gnm1.ann1.U9UY67 Arachis hypogaea HOM05D005457 ORTHO05D006350 1.0e-59 236.5 1112 29.6
Nn2g11331 Nelumbo nucifera HOM05D005457 ORTHO05D006350 8.9e-59 233.4 1279 29.9
Ah.14g082630 Amaranthus hybridus HOM05D005457 ORTHO05D006350 3.7e-57 228.0 1118 28.5
Peaxi162Scf00433g00116 Petunia axillaris HOM05D005457 ORTHO05D006350 2.4e-56 225.3 1165 27.6
COL.COLO4_19073 Corchorus olitorius HOM05D005457 ORTHO05D006350 1.2e-55 223.0 1031 31.3
Glyma.09G228800 Glycine max HOM05D005457 ORTHO05D006350 1.2e-55 223.0 631 34.1
TPR.G3642 Trifolium pratense HOM05D005457 ORTHO05D006350 3.8e-54 218.0 456 36.8
AUR62001711 Chenopodium quinoa HOM05D005457 ORTHO05D006350 7.3e-53 213.8 808 30.7
MBI14_g32923_MAGBIO Magnolia biondii HOM05D005457 ORTHO05D006350 2.1e-52 212.2 1237 28.0
TAR623G1322 Trochodendron aralioides HOM05D005457 ORTHO05D006350 1.0e-51 209.9 472 39.8
PGSC0003DMG400006701 Solanum tuberosum HOM05D005457 ORTHO05D006350 4.0e-51 208.0 1121 29.0
Medtr4g037575 Medicago truncatula HOM05D005457 ORTHO05D006350 1.2e-50 206.5 311 45.3
Ca_19579_v3 Cicer arietinum L. HOM05D005457 ORTHO05D006350 2.6e-50 205.3 1074 29.4
Psat7g154880 Pisum sativum HOM05D005457 ORTHO05D006350 8.3e-49 200.3 1220 29.3
ECA247G2917 Erigeron canadensis HOM05D005457 ORTHO05D006350 1.4e-48 199.5 1080 28.9
Lsat_1_v5_gn_9_25441 Lactuca sativa HOM05D005457 ORTHO05D006350 2.0e-47 195.7 1111 29.0
Actinidia08557 Actinidia chinensis HOM05D005457 ORTHO05D006350 2.7e-47 195.3 738 29.9
AUR62020069 Chenopodium quinoa HOM05D005457 ORTHO05D006350 2.3e-46 192.2 1138 29.2
HanXRQChr08g0237081 Helianthus annuus HOM05D005457 ORTHO05D006350 2.3e-46 192.2 614 33.6
CAN.G1002.16 Capsicum annuum HOM05D005457 ORTHO05D006350 7.3e-45 187.2 1109 27.1
Cpa.g.sc112.90 Carica papaya HOM05D005457 ORTHO05D006350 2.8e-44 185.3 583 32.2
ATR0618G328 Amborella trichopoda HOM05D005457 ORTHO05D006350 2.3e-43 182.2 609 34.2
Oeu017421.1 Olea europaea HOM05D005457 ORTHO05D006350 1.5e-42 179.5 411 35.5
PSO782G3368 Papaver somniferum HOM05D005457 ORTHO05D006350 4.6e-39 167.9 704 31.4
PSO170G6745 Papaver somniferum HOM05D005457 ORTHO05D006350 1.1e-37 163.3 713 31.4
SalBow2G3533 Salvia bowleyana HOM05D005457 ORTHO05D006350 1.2e-36 159.8 1024 27.2
THA.LOC104799410 Tarenaya hassleriana HOM05D005457 ORTHO05D006350 1.8e-35 156.0 411 34.5
SHI05894 Sapria himalayana HOM05D005457 ORTHO05D006350 2.2e-33 149.1 1103 26.6
Duzib170G0589 Durio zibethinus HOM05D005457 ORTHO05D006350 3.7e-33 148.3 334 36.2
Cpa.g.sc112.91 Carica papaya HOM05D005457 ORTHO05D006350 2.4e-32 145.6 112 66.1
DCAR_027735 Daucus carota HOM05D005457 ORTHO05D006350 2.4e-32 145.6 350 34.6
CSS0049881 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 7.1e-32 144.1 770 29.2
SGA_v2.0_scaffold199G41161 Striga asiatica HOM05D005457 ORTHO05D006350 1.7e-30 139.4 412 33.0
Manes.01G166000 Manihot esculenta HOM05D005457 ORTHO05D006350 2.1e-28 132.5 438 31.5
Migut.N00905 Erythranthe guttata HOM05D005457 ORTHO05D006350 4.7e-28 131.3 263 38.0
CDE02G3816 Ceratophyllum demersum HOM05D034644 ORTHO05D006350 8.1e-28 130.6 605 27.4
RcHm_v2.0_Chr5g0067371 Rosa chinensis HOM05D005457 ORTHO05D006350 6.8e-27 127.5 573 30.0
CDE09G0768 Ceratophyllum demersum HOM05D005457 ORTHO05D006350 4.4e-26 124.8 127 55.9
Prupe.6G064700 Prunus persica HOM05D005457 ORTHO05D006350 9.9e-26 123.6 477 33.8
DCAR_027739 Daucus carota HOM05D005457 ORTHO05D006350 2.2e-25 122.5 490 30.6
DCAR_027737 Daucus carota HOM05D005457 ORTHO05D006350 1.7e-22 112.8 295 34.2
Nitab4.5_0006476g0010 Nicotiana tabacum HOM05D005457 ORTHO05D006350 4.6e-15 88.2 875 28.3
HPP92_001490 Vanilla planifolia HOM05D005457 ORTHO05D006350 1.5e-13 83.2 1160 24.1
unitig_27.g24810 Utricularia gibba HOM05D005457 ORTHO05D006350 5.6e-13 81.3 56 66.1
TAR623G0390 Trochodendron aralioides HOM05D005457 ORTHO05D006350 7.3e-13 80.9 731 26.9
Os12g0155300 Oryza sativa ssp. japonica HOM05D005457 ORTHO05D006350 4.8e-12 78.2 356 27.0
Cpa.g.sc112.89 Carica papaya HOM05D005457 ORTHO05D006350 1.1e-08 67.0 208 34.6
Nitab4.5_0000752g0010 Nicotiana tabacum HOM05D005457 ORTHO05D006350 1.3e-06 60.1 629 26.1
Zm00001eb358910 Zea mays HOM05D005457 ORTHO05D006350 1.8e-06 59.7 88 39.8
Duzib170G0080 Durio zibethinus HOM05D005457 ORTHO05D006350 3.0e-06 58.9 349 28.4


User provided reference genes

Program Settings