Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C020513.2 Cucumis melo HOM05D006986 ORTHO05D008714 1.7e-88 329.3 170 100.0
CsaV3_1G036550 Cucumis sativus L. HOM05D006986 ORTHO05D008714 2.6e-84 315.5 170 95.9
ClCG03G000370 Citrullus lanatus HOM05D006986 ORTHO05D008714 5.7e-76 287.7 170 88.8
Sed0010409 Sechium edule HOM05D006986 ORTHO05D008714 5.0e-72 274.6 169 86.4
GSVIVG01024640001 Vitis vinifera HOM05D006986 ORTHO05D008714 2.0e-44 183.0 165 63.0
Actinidia23203 Actinidia chinensis HOM05D006986 ORTHO05D008714 1.1e-39 167.2 169 56.8
Dinv28693 Davidia involucrata HOM05D006986 ORTHO05D008714 7.3e-39 164.5 168 57.1
PGSC0003DMG401031052 Solanum tuberosum HOM05D006986 ORTHO05D008714 4.4e-36 155.2 178 50.0
Atru.chr3.4128 Acer truncatum HOM05D006986 ORTHO05D008714 1.7e-35 153.3 157 50.3
Sopen03g028830 Solanum pennellii HOM05D006986 ORTHO05D008714 1.7e-35 153.3 179 50.3
Nitab4.5_0000758g0110 Nicotiana tabacum HOM05D006986 ORTHO05D008714 6.4e-35 151.4 174 51.7
Solyc03g098130.3 Solanum lycopersicum HOM05D006986 ORTHO05D008714 1.1e-34 150.6 179 49.7
QL01p026443 Quercus lobata HOM05D006986 ORTHO05D008714 5.4e-34 148.3 168 52.4
Haze_24406 Corylus avellana HOM05D006986 ORTHO05D008714 1.2e-33 147.1 165 51.5
Lalb_Chr15g0083221 Lupinus albus HOM05D006986 ORTHO05D008714 2.1e-33 146.4 167 53.9
Nn2g10992 Nelumbo nucifera HOM05D006986 ORTHO05D008714 2.1e-33 146.4 171 52.0
CAN.G637.24 Capsicum annuum HOM05D006986 ORTHO05D008714 3.9e-32 142.1 169 50.9
CiPaw.13G069900 Carya illinoinensis HOM05D006986 ORTHO05D008714 8.6e-32 141.0 171 51.5
Manes.18G142700 Manihot esculenta HOM05D006986 ORTHO05D008714 3.3e-31 139.0 158 53.2
Nitab4.5_0000003g0230 Nicotiana tabacum HOM05D006986 ORTHO05D008714 3.3e-31 139.0 157 51.6
Eucgr.B03999 Eucalyptus grandis HOM05D006986 ORTHO05D008714 5.6e-31 138.3 164 49.4
TAR633G1018 Trochodendron aralioides HOM05D006986 ORTHO05D008714 1.2e-30 137.1 163 51.5
Potri.009G077700 Populus trichocarpa HOM05D006986 ORTHO05D008714 1.6e-30 136.7 181 47.0
FAN11G3553 Fragaria x ananassa HOM05D006986 ORTHO05D008714 2.8e-30 136.0 154 51.9
FvH4_3g39700 Fragaria vesca HOM05D006986 ORTHO05D008714 3.6e-30 135.6 171 48.5
FAN16G0899 Fragaria x ananassa HOM05D006986 ORTHO05D008714 3.6e-30 135.6 171 48.5
Lsat_1_v5_gn_8_111400 Lactuca sativa HOM05D006986 ORTHO05D008714 6.2e-30 134.8 169 49.7
FAN25G2061 Fragaria x ananassa HOM05D006986 ORTHO05D008714 8.1e-30 134.4 153 52.3
Cc01_g14800 Coffea canephora HOM05D006986 ORTHO05D008714 1.4e-29 133.7 182 47.8
Thecc.09G357000 Theobroma cacao HOM05D006986 ORTHO05D008714 1.8e-29 133.3 157 50.3
Sabra09G0059300 Salix brachista HOM05D006986 ORTHO05D008714 3.1e-29 132.5 169 49.1
Psat5g153400 Pisum sativum HOM05D006986 ORTHO05D008714 4.0e-29 132.1 162 50.6
Cpa.g.sc2.365 Carica papaya HOM05D006986 ORTHO05D008714 5.2e-29 131.7 180 48.3
DCAR_007347 Daucus carota HOM05D006986 ORTHO05D008714 6.8e-29 131.3 168 48.2
Lj6g0005028 Lotus japonicus HOM05D006986 ORTHO05D008714 2.6e-28 129.4 166 47.6
Peaxi162Scf01176g00011 Petunia axillaris HOM05D006986 ORTHO05D008714 4.4e-28 128.6 179 46.4
Peaxi162Scf00060g00081 Petunia axillaris HOM05D006986 ORTHO05D008714 5.8e-28 128.3 179 46.4
Ca_15003_v3 Cicer arietinum L. HOM05D006986 ORTHO05D008714 7.6e-28 127.9 163 49.7
Peaxi162Scf00154g00045 Petunia axillaris HOM05D006986 ORTHO05D008714 7.6e-28 127.9 179 46.9
vmacro14620 Vaccinium macrocarpon HOM05D006986 ORTHO05D008714 1.7e-27 126.7 162 48.1
TWI79G1150 Tripterygium wilfordii HOM05D006986 ORTHO05D008714 3.8e-27 125.6 173 46.2
Duzib168G0630 Durio zibethinus HOM05D006986 ORTHO05D008714 4.9e-27 125.2 170 44.7
TAR636G2132 Trochodendron aralioides HOM05D006986 ORTHO05D008714 6.4e-27 124.8 166 47.0
Oeu029417.1 Olea europaea HOM05D006986 ORTHO05D008714 8.4e-27 124.4 173 47.4
Peaxi162Scf00108g00061 Petunia axillaris HOM05D006986 ORTHO05D008714 1.9e-26 123.2 176 46.0
PGR102G2392 Punica granatum HOM05D006986 ORTHO05D008714 3.2e-26 122.5 178 44.9
Ah.08g215140 Amaranthus hybridus HOM05D006986 ORTHO05D008714 5.4e-26 121.7 173 47.4
Medtr3g031370 Medicago truncatula HOM05D006986 ORTHO05D008714 7.1e-26 121.3 161 47.2
VMungo0540G2396 Vigna mungo HOM05D006986 ORTHO05D008714 9.2e-26 120.9 162 46.9
Rhsim01G0240600 Rhododendron simsii HOM05D006986 ORTHO05D008714 1.6e-25 120.2 151 45.7
CDE06G1764 Ceratophyllum demersum HOM05D006986 ORTHO05D008714 2.1e-25 119.8 148 49.3
unitig_60.g25554 Utricularia gibba HOM05D006986 ORTHO05D008714 2.1e-25 119.8 164 44.5
Thhalv10008798m.g Eutrema salsugineum HOM05D006986 ORTHO05D008714 3.5e-25 119.0 152 50.0
Glyma.11G164400 Glycine max HOM05D006986 ORTHO05D008714 3.5e-25 119.0 166 47.6
Cfa011771 Carpinus fangiana HOM05D006986 ORTHO05D008714 6.0e-25 118.2 166 45.8
AUR62009676 Chenopodium quinoa HOM05D006986 ORTHO05D008714 7.8e-25 117.9 175 46.9
Phvul.006G073400 Phaseolus vulgaris HOM05D006986 ORTHO05D008714 1.0e-24 117.5 162 46.9
Migut.N00765 Erythranthe guttata HOM05D006986 ORTHO05D008714 2.3e-24 116.3 157 49.0
Sp1g05740 Schrenkiella parvula HOM05D006986 ORTHO05D008714 2.3e-24 116.3 146 50.7
EL10Ac7g15912 Beta vulgaris HOM05D000133 ORTHO05D000259 3.9e-24 115.5 165 45.5
arahy.Tifrunner.gnm1.ann1.58BUY7 Arachis hypogaea HOM05D006986 ORTHO05D008714 5.1e-24 115.2 166 48.2
CDE12G0683 Ceratophyllum demersum HOM05D006986 ORTHO05D008714 5.1e-24 115.2 141 48.2
CDE07G1909 Ceratophyllum demersum HOM05D006986 ORTHO05D008714 6.6e-24 114.8 148 48.6
A08p35810 Brassica napus HOM05D006986 ORTHO05D008714 8.6e-24 114.4 151 49.7
BraA08t35488Z Brassica rapa HOM05D006986 ORTHO05D008714 8.6e-24 114.4 151 49.7
ECA240G2743 Erigeron canadensis HOM05D006986 ORTHO05D008714 8.6e-24 114.4 166 45.2
MD03G1055700 Malus domestica HOM05D006986 ORTHO05D008714 8.6e-24 114.4 179 43.0
COL.COLO4_11142 Corchorus olitorius HOM05D006986 ORTHO05D008714 1.1e-23 114.0 98 60.2
Peaxi162Scf00055g00052 Petunia axillaris HOM05D006986 ORTHO05D008714 1.9e-23 113.2 178 45.5
SalBow2G1752 Salvia bowleyana HOM05D006986 ORTHO05D008714 1.9e-23 113.2 167 44.3
arahy.Tifrunner.gnm1.ann1.RI1AQ0 Arachis hypogaea HOM05D006986 ORTHO05D008714 3.3e-23 112.5 166 47.6
THA.LOC104800770 Tarenaya hassleriana HOM05D006986 ORTHO05D008714 4.3e-23 112.1 151 48.3
BolC8t47074H Brassica oleracea HOM05D006986 ORTHO05D008714 7.3e-23 111.3 151 48.3
RcHm_v2.0_Chr5g0071561 Rosa chinensis HOM05D006986 ORTHO05D008714 7.3e-23 111.3 170 45.3
C08p02790 Brassica napus HOM05D006986 ORTHO05D008714 1.2e-22 110.5 151 47.7
SGA_v2.0_scaffold120G32953 Striga asiatica HOM05D006986 ORTHO05D008714 1.6e-22 110.2 166 43.4
Carub.0001s0631 Capsella rubella HOM05D006986 ORTHO05D008714 2.1e-22 109.8 152 46.7
BcaB03g13411 Brassica carinata HOM05D006986 ORTHO05D008714 3.6e-22 109.0 153 47.7
Ciclev10029398m.g Citrus clementina HOM05D006986 ORTHO05D008714 3.6e-22 109.0 178 46.6
Aa31LG1G8070 Aethionema arabicum HOM05D006986 ORTHO05D008714 6.2e-22 108.2 148 45.3
Actinidia32614 Actinidia chinensis HOM05D006986 ORTHO05D008714 1.4e-21 107.1 131 51.9
Peaxi162Scf00222g00001 Petunia axillaris HOM05D006986 ORTHO05D008714 1.4e-21 107.1 162 46.9
CARHR006710 Cardamine hirsuta HOM05D006986 ORTHO05D008714 1.8e-21 106.7 153 47.1
CANSAT54G0324 Cannabis sativa HOM05D006986 ORTHO05D008714 2.4e-21 106.3 178 47.2
MSTRG.12687 Avicennia marina HOM05D006986 ORTHO05D008714 3.1e-21 105.9 150 44.0
Gohir.D03G142700 Gossypium hirsutum HOM05D006986 ORTHO05D008714 3.1e-21 105.9 177 40.7
HPP92_003693 Vanilla planifolia HOM05D006986 ORTHO05D008714 3.1e-21 105.9 161 37.9
Glyma.18G057600 Glycine max HOM05D006986 ORTHO05D008714 8.9e-21 104.4 162 43.2
Prupe.6G049000 Prunus persica HOM05D006986 ORTHO05D008714 1.2e-20 104.0 180 43.3
Sc21g0005260 Simmondsia chinensis HOM05D006986 ORTHO05D008714 1.5e-20 103.6 163 42.3
TPR.G35622 Trifolium pratense HOM05D006986 ORTHO05D008714 1.5e-20 103.6 96 56.2
HanXRQChr02g0033811 Helianthus annuus HOM05D006986 ORTHO05D008714 2.6e-20 102.8 164 42.1
AUR62001879 Chenopodium quinoa HOM05D006986 ORTHO05D008714 4.4e-20 102.1 163 43.6
Peaxi162Scf01176g00002 Petunia axillaris HOM05D006986 ORTHO05D008714 4.4e-20 102.1 154 46.1
AL1G17080 Arabidopsis lyrata HOM05D006986 ORTHO05D008714 2.2e-19 99.8 148 46.6
Hund29010 Selenicereus undatus HOM05D006986 ORTHO05D008714 4.9e-19 98.6 160 42.5
Hund29014 Selenicereus undatus HOM05D006986 ORTHO05D008714 4.9e-19 98.6 160 42.5
AT1G07020 Arabidopsis thaliana HOM05D006986 ORTHO05D008714 8.4e-19 97.8 149 47.0
PSO765G0136 Papaver somniferum HOM05D006986 ORTHO05D008714 4.2e-18 95.5 166 40.4
PSO170G2557 Papaver somniferum HOM05D006986 ORTHO05D008714 5.4e-18 95.1 150 43.3
Gorai.003G149800 Gossypium raimondii HOM05D006986 ORTHO05D008714 9.3e-18 94.4 177 38.4
Aqoxy1G01299 Aquilegia oxysepala HOM05D006986 ORTHO05D008714 1.3e-16 90.5 149 42.3
Gohir.A03G025800 Gossypium hirsutum HOM05D006986 ORTHO05D008714 1.5e-15 87.0 158 38.6
ATR0174G018 Amborella trichopoda HOM05D006986 ORTHO05D008714 6.2e-14 81.6 165 37.0
PSO349G0135 Papaver somniferum HOM05D006986 ORTHO05D008714 1.1e-13 80.9 120 42.5
PSO339G5371 Papaver somniferum HOM05D006986 ORTHO05D008714 5.3e-13 78.6 148 36.5
FvH4_3g21494 Fragaria vesca HOM05D006986 ORTHO05D008714 4.2e-10 68.9 71 50.7
SEGI_39902 Sequoiadendron giganteum HOM05D006986 ORTHO05D008714 1.8e-08 63.5 152 34.2
Glyma.06G163400 Glycine max HOM05D006986 ORTHO05D008714 3.3e-07 59.3 50 54.0
Hma1.2p1_1761F.1_g301290 Hydrangea macrophylla HOM05D006986 ORTHO05D008714 1.3e-06 57.4 36 66.7
Hma1.2p1_1761F.1_g301295 Hydrangea macrophylla HOM05D006986 ORTHO05D008714 1.3e-06 57.4 36 66.7


User provided reference genes

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