Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C020303.2 Cucumis melo HOM05D002536 ORTHO05D008091 3.9e-171 604.7 315 100.0
CsaV3_3G017670 Cucumis sativus L. HOM05D002536 ORTHO05D008091 1.0e-155 553.5 315 93.0
Sed0014940 Sechium edule HOM05D002536 ORTHO05D008091 1.9e-149 532.7 315 88.3
ClCG05G010840 Citrullus lanatus HOM05D002536 ORTHO05D008091 1.2e-132 476.9 268 92.5
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 9.5e-117 424.1 294 74.8
Cfa007856 Carpinus fangiana HOM05D002536 ORTHO05D008091 4.7e-116 421.8 318 71.4
CANSAT78G0797 Cannabis sativa HOM05D002536 ORTHO05D008091 8.0e-116 421.0 268 82.1
Atru.chr1.1783 Acer truncatum HOM05D002536 ORTHO05D008091 4.0e-115 418.7 316 72.5
Atru.chr1.1780 Acer truncatum HOM05D002536 ORTHO05D008091 6.8e-115 417.9 316 72.2
TWI53G1346 Tripterygium wilfordii HOM05D002536 ORTHO05D008091 6.8e-115 417.9 299 72.9
Lalb_Chr03g0036071 Lupinus albus HOM05D002536 ORTHO05D008091 5.7e-114 414.8 269 79.9
Ca_06135_v3 Cicer arietinum L. HOM05D002536 ORTHO05D008091 7.5e-114 414.5 269 79.6
TAR622G0880 Trochodendron aralioides HOM05D002536 ORTHO05D008091 7.5e-114 414.5 280 76.4
Prupe.3G152500 Prunus persica HOM05D002536 ORTHO05D008091 2.2e-113 412.9 321 71.0
Sp6g26760 Schrenkiella parvula HOM05D002536 ORTHO05D008091 2.2e-113 412.9 310 71.0
Sabra04G0061700 Salix brachista HOM05D002536 ORTHO05D008091 2.8e-113 412.5 276 77.5
LjContig00564g0008816 Lotus japonicus HOM05D002536 ORTHO05D008091 4.9e-113 411.8 277 78.0
Ah.10g037920 Amaranthus hybridus HOM05D002536 ORTHO05D008091 6.3e-113 411.4 269 79.2
AUR62023248 Chenopodium quinoa HOM05D002536 ORTHO05D008091 1.4e-112 410.2 268 79.9
arahy.Tifrunner.gnm1.ann1.SZ684F Arachis hypogaea HOM05D002536 ORTHO05D008091 2.4e-112 409.5 301 73.1
FAN23G2237 Fragaria x ananassa HOM05D002536 ORTHO05D008091 2.4e-112 409.5 292 75.0
CiPaw.04G045700 Carya illinoinensis HOM05D002536 ORTHO05D008091 7.0e-112 407.9 314 72.0
TPR.G11790 Trifolium pratense HOM05D002536 ORTHO05D008091 9.2e-112 407.5 269 78.4
EL10Ac2g04494 Beta vulgaris HOM05D002536 ORTHO05D008091 2.0e-111 406.4 268 79.5
arahy.Tifrunner.gnm1.ann1.NZLK2N Arachis hypogaea HOM05D002536 ORTHO05D008091 3.5e-111 405.6 276 76.4
Rhsim10G0078900 Rhododendron simsii HOM05D002536 ORTHO05D008091 4.5e-111 405.2 270 78.9
Medtr5g087440 Medicago truncatula HOM05D002536 ORTHO05D008091 1.3e-110 403.7 269 77.0
QL05p059601 Quercus lobata HOM05D002536 ORTHO05D008091 2.3e-110 402.9 267 78.7
Medtr5g086010 Medicago truncatula HOM05D002536 ORTHO05D008091 2.9e-110 402.5 269 77.0
Psat2g023480 Pisum sativum HOM05D002536 ORTHO05D008091 2.9e-110 402.5 272 75.7
Aqoxy3G00142 Aquilegia oxysepala HOM05D002536 ORTHO05D008091 8.6e-110 401.0 296 72.3
Cc07_g08230 Coffea canephora HOM05D002536 ORTHO05D008091 1.1e-109 400.6 267 76.4
Potri.004G091600 Populus trichocarpa HOM05D002536 ORTHO05D008091 1.9e-109 399.8 272 77.6
QL05p059839 Quercus lobata HOM05D002536 ORTHO05D008091 1.9e-109 399.8 295 73.9
GSVIVG01030878001 Vitis vinifera HOM05D002536 ORTHO05D008091 1.9e-109 399.8 309 70.6
Eucgr.F02816 Eucalyptus grandis HOM05D002536 ORTHO05D008091 3.3e-109 399.1 268 77.2
MD09G1260700 Malus domestica HOM05D002536 ORTHO05D008091 5.6e-109 398.3 266 78.6
Thhalv10014009m.g Eutrema salsugineum HOM05D002536 ORTHO05D008091 7.3e-109 397.9 301 70.1
GSVIVG01030879001 Vitis vinifera HOM05D002536 ORTHO05D008091 1.2e-108 397.1 268 78.0
COL.COLO4_16592 Corchorus olitorius HOM05D002536 ORTHO05D008091 1.6e-108 396.7 279 76.0
Hund13690 Selenicereus undatus HOM05D002536 ORTHO05D008091 1.6e-108 396.7 267 78.3
QL05p058873 Quercus lobata HOM05D002536 ORTHO05D008091 6.1e-108 394.8 267 77.5
RcHm_v2.0_Chr3g0492091 Rosa chinensis HOM05D002536 ORTHO05D008091 1.0e-107 394.0 312 69.9
DCAR_008922 Daucus carota HOM05D000103 ORTHO05D008091 1.4e-107 393.7 277 75.8
Aa31LG11G12180 Aethionema arabicum HOM05D002536 ORTHO05D008091 1.8e-107 393.3 270 75.9
BolC2t06821H Brassica oleracea HOM05D002536 ORTHO05D008091 2.3e-107 392.9 308 69.2
A02p04220 Brassica napus HOM05D002536 ORTHO05D008091 5.2e-107 391.7 310 69.0
BraA02t05385Z Brassica rapa HOM05D002536 ORTHO05D008091 5.2e-107 391.7 310 69.0
Actinidia15922 Actinidia chinensis HOM05D002536 ORTHO05D008091 8.9e-107 391.0 293 72.4
Nn3g18195 Nelumbo nucifera HOM05D002536 ORTHO05D008091 8.9e-107 391.0 312 70.5
FvH4_1g30050 Fragaria vesca HOM05D002536 ORTHO05D008091 1.2e-106 390.6 273 75.8
Lj2P435T31 Lonicera japonica HOM05D002536 ORTHO05D008091 2.0e-106 389.8 262 79.0
arahy.Tifrunner.gnm1.ann1.CBV847 Arachis hypogaea HOM05D002536 ORTHO05D008091 2.6e-106 389.4 286 72.4
Ciclev10012168m.g Citrus clementina HOM05D002536 ORTHO05D008091 4.4e-106 388.7 266 78.2
MSTRG.23612 Avicennia marina HOM05D002536 ORTHO05D008091 5.7e-106 388.3 267 74.5
HanXRQChr11g0325231 Helianthus annuus HOM05D002536 ORTHO05D008091 5.7e-106 388.3 267 74.2
PGR004G1229 Punica granatum HOM05D002536 ORTHO05D008091 7.5e-106 387.9 287 74.2
C02p09100 Brassica napus HOM05D002536 ORTHO05D008091 6.4e-105 384.8 315 67.9
Sc10g0000870 Simmondsia chinensis HOM05D002536 ORTHO05D008091 1.4e-104 383.6 297 71.7
Cpa.g.sc116.19 Carica papaya HOM05D002536 ORTHO05D008091 9.2e-104 380.9 272 76.1
FAN19G1396 Fragaria x ananassa HOM05D002536 ORTHO05D008091 1.2e-103 380.6 266 75.6
FAN26G2179 Fragaria x ananassa HOM05D002536 ORTHO05D008091 1.2e-103 380.6 273 74.4
Phvul.004G133300 Phaseolus vulgaris HOM05D002536 ORTHO05D008091 2.7e-103 379.4 310 67.4
VMungo1309G0890 Vigna mungo HOM05D002536 ORTHO05D008091 3.5e-103 379.0 269 74.0
ECA232G4028 Erigeron canadensis HOM05D002536 ORTHO05D008091 7.8e-103 377.9 267 74.2
arahy.Tifrunner.gnm1.ann1.YLI9AK Arachis hypogaea HOM05D002536 ORTHO05D008091 1.7e-102 376.7 242 79.3
AL6G28530 Arabidopsis lyrata HOM05D002536 ORTHO05D008091 3.0e-102 375.9 312 66.7
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 3.0e-102 375.9 269 74.7
Hma1.2p1_0283F.1_g113560 Hydrangea macrophylla HOM05D002536 ORTHO05D008091 6.6e-102 374.8 267 75.7
Thecc.02G292900 Theobroma cacao HOM05D002536 ORTHO05D008091 6.6e-102 374.8 279 74.6
Sopen02g035940 Solanum pennellii HOM05D002536 ORTHO05D008091 1.9e-101 373.2 268 73.5
Phvul.008G162400 Phaseolus vulgaris HOM05D002536 ORTHO05D008091 2.5e-101 372.9 309 66.3
Gohir.A04G142800 Gossypium hirsutum HOM05D002536 ORTHO05D008091 3.3e-101 372.5 279 72.8
Gohir.D04G186100 Gossypium hirsutum HOM05D002536 ORTHO05D008091 3.3e-101 372.5 279 72.8
Gorai.012G182500 Gossypium raimondii HOM05D002536 ORTHO05D008091 3.3e-101 372.5 279 72.8
CARHR195750 Cardamine hirsuta HOM05D002536 ORTHO05D008091 7.3e-101 371.3 301 67.1
Manes.01G115200 Manihot esculenta HOM05D002536 ORTHO05D008091 7.3e-101 371.3 234 83.8
Solyc02g091320.4 Solanum lycopersicum HOM05D002536 ORTHO05D008091 9.5e-101 370.9 265 73.6
Carub.0006s1568 Capsella rubella HOM05D002536 ORTHO05D008091 1.2e-100 370.5 309 66.3
Oeu047422.1 Olea europaea HOM05D002536 ORTHO05D008091 1.2e-100 370.5 292 68.2
Duzib248G1146 Durio zibethinus HOM05D002536 ORTHO05D008091 8.0e-100 367.9 279 73.5
Migut.H00262 Erythranthe guttata HOM05D002536 ORTHO05D008091 8.0e-100 367.9 267 71.2
Dinv19004 Davidia involucrata HOM05D002536 ORTHO05D008091 2.3e-99 366.3 267 74.2
SalBow3G4287 Salvia bowleyana HOM05D002536 ORTHO05D008091 4.0e-99 365.5 296 65.9
Nitab4.5_0002248g0020 Nicotiana tabacum HOM05D002536 ORTHO05D008091 1.2e-98 364.0 268 72.0
Lsat_1_v5_gn_4_154760 Lactuca sativa HOM05D002536 ORTHO05D008091 1.5e-98 363.6 268 72.0
Nitab4.5_0002456g0160 Nicotiana tabacum HOM05D002536 ORTHO05D008091 1.5e-98 363.6 268 72.0
CAN.G625.80 Capsicum annuum HOM05D002536 ORTHO05D008091 2.0e-98 363.2 269 71.7
CSS0023678 Camellia sinensis var. sinensis HOM05D002536 ORTHO05D006290 3.4e-98 362.5 267 73.0
Peaxi162Scf00803g00531 Petunia axillaris HOM05D002536 ORTHO05D008091 1.3e-97 360.5 268 70.9
QL05p059463 Quercus lobata HOM05D002536 ORTHO05D008091 2.2e-97 359.8 267 71.9
PGSC0003DMG400030642 Solanum tuberosum HOM05D002536 ORTHO05D008091 4.9e-97 358.6 268 71.6
PSO478G1642 Papaver somniferum HOM05D002536 ORTHO05D008091 1.1e-93 347.4 271 70.8
PSO782G0049 Papaver somniferum HOM05D002536 ORTHO05D008091 5.6e-93 345.1 309 63.8
AT5G17460 Arabidopsis thaliana HOM05D002536 ORTHO05D008091 8.3e-89 331.3 234 74.8
BcaC03g13522 Brassica carinata HOM05D002536 ORTHO05D008091 1.1e-88 330.9 275 66.5
AUR62023202 Chenopodium quinoa HOM05D002536 ORTHO05D008091 5.4e-88 328.6 213 79.8
Os01g0125700 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D008091 6.6e-86 321.6 259 67.6
FAN28G0948 Fragaria x ananassa HOM05D002536 ORTHO05D008091 7.3e-85 318.2 224 74.1
ATR0041G006 Amborella trichopoda HOM05D002536 ORTHO05D008091 1.4e-83 313.9 266 63.2
CDE07G0699 Ceratophyllum demersum HOM05D002536 ORTHO05D008091 1.4e-83 313.9 271 63.8
Glyma.14G164000 Glycine max HOM05D002536 ORTHO05D008091 1.7e-78 297.0 269 62.8
SGA_v2.0_scaffold6G03262 Striga asiatica HOM05D002536 ORTHO05D008091 9.0e-75 284.6 250 58.8
SHI17045 Sapria himalayana HOM05D002536 ORTHO05D008091 4.4e-74 282.3 270 59.6
SGA_v2.0_scaffold6G03263 Striga asiatica HOM05D002536 ORTHO05D008091 3.5e-71 272.7 248 58.1
Zm00001eb334950 Zea mays HOM05D002536 ORTHO05D008091 7.8e-71 271.6 170 79.4
MD09G1260800 Malus domestica HOM05D002536 ORTHO05D008091 2.8e-68 263.1 184 75.5
SGA_v2.0_scaffold6G03266 Striga asiatica HOM05D002536 ORTHO05D008091 3.6e-68 262.7 240 58.8
MBI16_g46274_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D008091 3.4e-66 256.1 171 76.0
unitig_899.g15351 Utricularia gibba HOM05D002536 ORTHO05D008091 1.6e-63 247.3 231 58.9
SEGI_34238 Sequoiadendron giganteum HOM05D002536 ORTHO05D008091 6.9e-59 231.9 271 49.4
Glyma.13G079200 Glycine max HOM05D002536 ORTHO05D008091 7.1e-56 221.9 205 60.5
SGA_v2.0_scaffold6G03268 Striga asiatica HOM05D002536 ORTHO05D008091 2.7e-55 219.9 236 54.2
FAN28G0812 Fragaria x ananassa HOM05D002536 ORTHO05D008091 2.4e-43 180.3 264 45.1
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 6.9e-43 178.7 150 63.3
MD09G1260900 Malus domestica HOM05D002536 ORTHO05D008091 1.3e-41 174.5 180 56.1
A10p21940 Brassica napus HOM05D002536 ORTHO05D008091 3.2e-24 116.7 81 71.6
HPP92_000766 Vanilla planifolia HOM05D002536 ORTHO05D008091 5.7e-21 105.9 117 53.8
BcaC04g18790 Brassica carinata HOM05D002536 ORTHO05D008091 1.7e-20 104.4 84 65.5
BolC9t58807H Brassica oleracea HOM05D002536 ORTHO05D008091 4.8e-20 102.8 84 65.5
C09p59690 Brassica napus HOM05D002536 ORTHO05D008091 1.8e-19 100.9 84 65.5
BraA10t44252Z Brassica rapa HOM05D002536 ORTHO05D008091 7.2e-08 62.4 66 53.0
A10p21930 Brassica napus HOM05D002536 ORTHO05D008091 2.7e-07 60.5 66 53.0


User provided reference genes

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