Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C020107.2 Cucumis melo HOM05D002744 ORTHO05D008989 4.1e-78 294.7 149 100.0
CsaV3_5G010720 Cucumis sativus L. HOM05D002744 ORTHO05D008989 1.6e-69 266.2 191 75.9
Sed0024728 Sechium edule HOM05D002744 ORTHO05D008989 3.1e-62 241.9 191 69.6
GSVIVG01032723001 Vitis vinifera HOM05D002744 ORTHO05D008989 2.7e-45 185.7 193 54.4
ClCG07G004800 Citrullus lanatus HOM05D002744 ORTHO05D008989 7.8e-45 184.1 191 58.6
Thecc.10G007100 Theobroma cacao HOM05D002744 ORTHO05D008989 1.5e-43 179.9 193 52.3
Nitab4.5_0000928g0050 Nicotiana tabacum HOM05D002744 ORTHO05D008989 1.2e-42 176.8 193 52.8
Ciclev10032836m.g Citrus clementina HOM05D002744 ORTHO05D008989 1.6e-42 176.4 194 51.5
Dinv21809 Davidia involucrata HOM05D002744 ORTHO05D008989 3.6e-42 175.3 191 52.9
RcHm_v2.0_Chr1g0371481 Rosa chinensis HOM05D002744 ORTHO05D008989 4.7e-42 174.9 194 50.5
CiPaw.02G197300 Carya illinoinensis HOM05D002744 ORTHO05D008989 6.2e-42 174.5 194 50.5
CANSAT56G2966 Cannabis sativa HOM05D002744 ORTHO05D008989 8.1e-42 174.1 194 49.0
QL08p064284 Quercus lobata HOM05D002744 ORTHO05D008989 1.8e-41 172.9 193 52.3
TWI38G2197 Tripterygium wilfordii HOM05D002744 ORTHO05D008989 2.3e-41 172.6 189 50.8
Hma1.2p1_1240F.1_g269640 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 6.8e-41 171.0 159 57.9
MD01G1161400 Malus domestica HOM05D002744 ORTHO05D008989 6.8e-41 171.0 191 50.3
HanXRQChr17g0560791 Helianthus annuus HOM05D002744 ORTHO05D008989 8.9e-41 170.6 193 49.2
Gohir.A05G332500 Gossypium hirsutum HOM05D002744 ORTHO05D008989 1.2e-40 170.2 193 50.8
Gohir.D04G071200 Gossypium hirsutum HOM05D002744 ORTHO05D008989 1.5e-40 169.9 191 49.7
Migut.A01076 Erythranthe guttata HOM05D002744 ORTHO05D008989 2.0e-40 169.5 192 49.5
PGR142G3983 Punica granatum HOM05D002744 ORTHO05D008989 2.6e-40 169.1 190 48.9
Peaxi162Scf00284g00123 Petunia axillaris HOM05D002744 ORTHO05D008989 3.4e-40 168.7 195 51.3
Duzib114G0765 Durio zibethinus HOM05D002744 ORTHO05D008989 4.4e-40 168.3 196 50.0
MD07G1229300 Malus domestica HOM05D002744 ORTHO05D008989 4.4e-40 168.3 191 49.7
MSTRG.12212 Avicennia marina HOM05D002744 ORTHO05D008989 7.5e-40 167.5 185 49.7
Haze_17321 Corylus avellana HOM05D002744 ORTHO05D008989 7.5e-40 167.5 194 50.0
Eucgr.G03110 Eucalyptus grandis HOM05D002744 ORTHO05D008989 1.7e-39 166.4 194 49.5
SalBow3G4547 Salvia bowleyana HOM05D002744 ORTHO05D008989 1.7e-39 166.4 185 50.8
Sopen02g021690 Solanum pennellii HOM05D002744 ORTHO05D008989 2.2e-39 166.0 195 50.8
arahy.Tifrunner.gnm1.ann1.HIE7A8 Arachis hypogaea HOM05D002744 ORTHO05D008989 2.9e-39 165.6 194 47.9
Manes.10G008400 Manihot esculenta HOM05D002744 ORTHO05D008989 6.4e-39 164.5 187 48.1
Cpa.g.sc19.99 Carica papaya HOM05D002744 ORTHO05D008989 1.1e-38 163.7 172 51.7
Actinidia00986 Actinidia chinensis HOM05D002744 ORTHO05D008989 1.4e-38 163.3 195 48.2
FvH4_7g25501 Fragaria vesca HOM05D002744 ORTHO05D008989 1.4e-38 163.3 192 45.8
Cc02_g05720 Coffea canephora HOM05D002744 ORTHO05D008989 2.4e-38 162.5 190 50.0
Hund13513 Selenicereus undatus HOM05D002744 ORTHO05D008989 2.4e-38 162.5 190 48.9
FAN06G0491 Fragaria x ananassa HOM05D002744 ORTHO05D006546 3.2e-38 162.2 192 45.3
Nitab4.5_0000263g0100 Nicotiana tabacum HOM05D002744 ORTHO05D008989 5.4e-38 161.4 160 54.4
FAN03G1008 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.6e-37 159.8 192 45.8
Glyma.18G022300 Glycine max HOM05D002744 ORTHO05D008989 1.6e-37 159.8 194 49.5
FAN10G0428 Fragaria x ananassa HOM05D002744 ORTHO05D006546 4.6e-37 158.3 192 45.8
Glyma.11G234700 Glycine max HOM05D002744 ORTHO05D008989 4.6e-37 158.3 195 50.3
Gorai.012G080100 Gossypium raimondii HOM05D002744 ORTHO05D008989 4.6e-37 158.3 172 52.3
Atru.BG.256.p Acer truncatum HOM05D002744 ORTHO05D008989 6.0e-37 157.9 152 55.9
Rhsim09G0182800 Rhododendron simsii HOM05D002744 ORTHO05D008989 6.0e-37 157.9 191 46.6
arahy.Tifrunner.gnm1.ann1.N80L0Z Arachis hypogaea HOM05D002744 ORTHO05D008989 2.3e-36 156.0 189 46.6
Potri.008G075600 Populus trichocarpa HOM05D002744 ORTHO05D008989 3.0e-36 155.6 185 48.1
arahy.Tifrunner.gnm1.ann1.B5C26Y Arachis hypogaea HOM05D002744 ORTHO05D008989 5.1e-36 154.8 189 46.0
ECA233G4001 Erigeron canadensis HOM05D002744 ORTHO05D008989 5.1e-36 154.8 197 45.2
Nn2g11068 Nelumbo nucifera HOM05D002744 ORTHO05D008989 5.1e-36 154.8 189 46.0
PSO017G6389 Papaver somniferum HOM05D002744 ORTHO05D008989 5.1e-36 154.8 191 45.0
EL10Ac2g04293 Beta vulgaris HOM05D002744 ORTHO05D008989 8.6e-36 154.1 155 51.6
Hma1.2p1_0322F.1_g124790 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 1.9e-35 152.9 111 64.0
FAN01G1994 Fragaria x ananassa HOM05D002744 ORTHO05D006546 2.5e-35 152.5 214 41.1
Ca_15179_v3 Cicer arietinum L. HOM05D002744 ORTHO05D008989 3.3e-35 152.1 194 46.4
Lj8C58T1 Lonicera japonica HOM05D002744 ORTHO05D008989 3.3e-35 152.1 159 54.1
Lju41C22T0 Lonicera japonica HOM05D002744 ORTHO05D008989 3.3e-35 152.1 159 53.5
Sabra08G0056200 Salix brachista HOM05D002744 ORTHO05D008989 3.3e-35 152.1 190 45.8
Medtr3g072120 Medicago truncatula HOM05D002744 ORTHO05D008989 4.3e-35 151.8 195 45.6
COL.COLO4_25825 Corchorus olitorius HOM05D002744 ORTHO05D006546 5.6e-35 151.4 183 45.4
PSO170G0776 Papaver somniferum HOM05D002744 ORTHO05D008989 7.3e-35 151.0 191 44.0
SGA_v2.0_scaffold36G14267 Striga asiatica HOM05D002744 ORTHO05D008989 7.3e-35 151.0 188 49.5
TPR.G28641 Trifolium pratense HOM05D002744 ORTHO05D008989 7.3e-35 151.0 194 46.4
Thhalv10006252m.g Eutrema salsugineum HOM05D002744 ORTHO05D008989 9.5e-35 150.6 192 43.2
BolC8t50775H Brassica oleracea HOM05D002744 ORTHO05D008989 1.2e-34 150.2 164 47.0
CSS0017108 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 1.6e-34 149.8 160 49.4
THA.LOC104824346 Tarenaya hassleriana HOM05D002744 ORTHO05D008989 1.6e-34 149.8 183 44.8
DCAR_011891 Daucus carota HOM05D002744 ORTHO05D008989 3.6e-34 148.7 156 50.6
Phvul.001G248100 Phaseolus vulgaris HOM05D002744 ORTHO05D008989 4.7e-34 148.3 194 44.8
Lalb_Chr08g0231351 Lupinus albus HOM05D002744 ORTHO05D008989 6.2e-34 147.9 191 46.6
AL5G37530 Arabidopsis lyrata HOM05D002744 ORTHO05D008989 1.1e-33 147.1 193 40.9
BcaB08g34630 Brassica carinata HOM05D002744 ORTHO05D008989 1.1e-33 147.1 190 42.6
Sp5g06290 Schrenkiella parvula HOM05D002744 ORTHO05D008989 1.8e-33 146.4 192 42.7
A09p49190 Brassica napus HOM05D002744 ORTHO05D008989 3.1e-33 145.6 191 41.9
Carub.0005s2299 Capsella rubella HOM05D002744 ORTHO05D008989 3.1e-33 145.6 192 41.1
AUR62022976 Chenopodium quinoa HOM05D002744 ORTHO05D008989 3.1e-33 145.6 187 45.5
VMungo1383G3724 Vigna mungo HOM05D002744 ORTHO05D008989 5.2e-33 144.8 191 45.0
AUR62012334 Chenopodium quinoa HOM05D002744 ORTHO05D008989 8.9e-33 144.1 153 49.0
BraA09t40372Z Brassica rapa HOM05D002744 ORTHO05D008989 1.2e-32 143.7 199 40.7
Lsat_1_v5_gn_8_13401 Lactuca sativa HOM05D002744 ORTHO05D008989 1.2e-32 143.7 155 51.0
CDE01G0559 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 5.8e-32 141.4 101 67.3
Os03g0665800 Oryza sativa ssp. japonica HOM05D002744 ORTHO05D008989 9.9e-32 140.6 159 45.3
AT3G56210 Arabidopsis thaliana HOM05D002744 ORTHO05D008989 1.3e-31 140.2 194 39.7
Lj6g0011522 Lotus japonicus HOM05D002744 ORTHO05D008989 1.7e-31 139.8 194 44.3
CARHR166360 Cardamine hirsuta HOM05D002744 ORTHO05D008989 8.4e-31 137.5 170 41.8
CDE02G4284 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 4.1e-30 135.2 105 61.9
Hma1.2p1_1240F.1_g269630 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 9.2e-30 134.0 93 72.0
unitig_32.g11706 Utricularia gibba HOM05D002744 ORTHO05D008989 3.5e-29 132.1 177 40.7
unitig_33.g30211 Utricularia gibba HOM05D002744 ORTHO05D008989 3.5e-29 132.1 177 40.7
Lj1A963T49 Lonicera japonica HOM05D002744 ORTHO05D008989 2.3e-28 129.4 71 83.1
TAR369G0133 Trochodendron aralioides HOM05D000826 ORTHO05D001831 3.0e-28 129.0 104 61.5
Oeu026180.1 Olea europaea HOM05D002744 ORTHO05D008989 1.5e-27 126.7 137 50.4
BcaC07g39936 Brassica carinata HOM05D002744 ORTHO05D008989 4.3e-27 125.2 102 58.8
C08p31530 Brassica napus HOM05D002744 ORTHO05D008989 4.3e-27 125.2 102 58.8
EL10Ac2g04295 Beta vulgaris HOM05D002744 ORTHO05D008989 1.2e-26 123.6 95 61.1
HPP92_013966 Vanilla planifolia HOM05D002744 ORTHO05D008989 1.2e-26 123.6 173 42.2
Zm00001eb065520 Zea mays HOM05D002744 ORTHO05D008989 2.8e-26 122.5 104 54.8
Psat5g130160 Pisum sativum HOM05D002744 ORTHO05D008989 6.9e-25 117.9 104 59.6
ATR0681G046 Amborella trichopoda HOM05D000826 ORTHO05D008989 1.5e-24 116.7 146 43.2
BcaB01g00016 Brassica carinata HOM05D002744 ORTHO05D008989 9.9e-24 114.0 159 40.9
Prupe.2G259500 Prunus persica HOM05D002744 ORTHO05D008989 9.9e-24 114.0 126 50.8
vmacro09984 Vaccinium macrocarpon HOM05D002744 ORTHO05D008989 1.7e-23 113.2 164 43.9
Sc10g0002800 Simmondsia chinensis HOM05D002744 ORTHO05D008989 2.9e-23 112.5 137 48.9
BcaB01g00017 Brassica carinata HOM05D002744 ORTHO05D008989 9.3e-22 107.5 167 38.9
SEGI_09795 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 1.2e-21 107.1 174 36.8
PGSC0003DMG400010239 Solanum tuberosum HOM05D002744 ORTHO05D008989 5.1e-20 101.7 125 48.0
Solyc02g076790.4 Solanum lycopersicum HOM05D002744 ORTHO05D008989 1.9e-19 99.8 125 46.4
SEGI_38813 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 3.6e-18 95.5 91 48.4
TAR623G0678 Trochodendron aralioides HOM05D002744 ORTHO05D008989 9.9e-16 87.4 122 45.1
Mapoly0001s0439 Marchantia polymorpha HOM05D002744 ORTHO05D008989 1.3e-15 87.0 100 43.0
Gohir.A10G240750 Gossypium hirsutum HOM05D002744 ORTHO05D008989 5.4e-14 81.6 124 40.3
Aa31LG10G11120 Aethionema arabicum HOM05D002744 ORTHO05D008989 1.2e-13 80.5 124 37.1
Pp3c8_1670 Physcomitrium patens HOM05D002744 ORTHO05D008989 2.1e-10 69.7 92 37.0
CAN.G118.19 Capsicum annuum HOM05D002744 ORTHO05D008989 1.4e-09 67.0 49 65.3
C06p23580 Brassica napus HOM05D002744 ORTHO05D008989 4.0e-09 65.5 49 55.1
Psat5g125520 Pisum sativum HOM05D002744 ORTHO05D008989 4.0e-09 65.5 61 54.1


User provided reference genes

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