Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C020063.2 Cucumis melo HOM05D008187 ORTHO05D009830 9.3e-62 240.0 116 100.0
CsaV3_5G012950 Cucumis sativus L. HOM05D008187 ORTHO05D009830 9.6e-59 229.9 116 94.0
ClCG11G000980 Citrullus lanatus HOM05D008187 ORTHO05D009830 2.1e-53 212.2 116 87.9
Sed0002824 Sechium edule HOM05D008187 ORTHO05D009830 7.4e-35 150.6 122 65.6
CiPaw.05G158900 Carya illinoinensis HOM05D008187 ORTHO05D009830 8.8e-20 100.5 119 53.8
QL03p039185 Quercus lobata HOM05D008187 ORTHO05D009830 3.7e-18 95.1 128 49.2
Thecc.02G303500 Theobroma cacao HOM05D008187 ORTHO05D009830 3.7e-18 95.1 123 48.0
Ciclev10016789m.g Citrus clementina HOM05D008187 ORTHO05D009830 1.1e-17 93.6 130 40.8
Dinv08898 Davidia involucrata HOM05D008187 ORTHO05D009830 1.1e-17 93.6 120 48.3
GSVIVG01011592001 Vitis vinifera HOM05D008187 ORTHO05D009830 3.1e-17 92.0 131 44.3
COL.COLO4_27577 Corchorus olitorius HOM05D008187 ORTHO05D009830 4.1e-17 91.7 124 49.2
CiPaw.06G058400 Carya illinoinensis HOM05D008187 ORTHO05D009830 7.0e-17 90.9 123 51.2
MD13G1015500 Malus domestica HOM05D008187 ORTHO05D009830 1.6e-16 89.7 127 43.3
Lalb_Chr07g0187941 Lupinus albus HOM05D008187 ORTHO05D009830 2.0e-16 89.4 120 45.0
Psat7g085360 Pisum sativum HOM05D008187 ORTHO05D009830 5.9e-16 87.8 123 48.8
Manes.15G138900 Manihot esculenta HOM05D008187 ORTHO05D009830 1.0e-15 87.0 125 47.2
Ca_18193_v3 Cicer arietinum L. HOM05D008187 ORTHO05D009830 1.3e-15 86.7 121 47.9
Dinv20504 Davidia involucrata HOM05D008187 ORTHO05D009830 1.7e-15 86.3 120 45.8
Dinv20537 Davidia involucrata HOM05D008187 ORTHO05D009830 1.7e-15 86.3 120 45.8
Lj4g0022895 Lotus japonicus HOM05D008187 ORTHO05D009830 2.2e-15 85.9 119 47.9
arahy.Tifrunner.gnm1.ann1.FUMC5T Arachis hypogaea HOM05D008187 ORTHO05D009830 2.9e-15 85.5 119 46.2
TWI74G1547 Tripterygium wilfordii HOM05D008187 ORTHO05D009830 2.9e-15 85.5 119 43.7
arahy.Tifrunner.gnm1.ann1.61TZTK Arachis hypogaea HOM05D008187 ORTHO05D009830 3.8e-15 85.1 119 43.7
VMungo0251G0444 Vigna mungo HOM05D008187 ORTHO05D009830 3.8e-15 85.1 120 47.5
FAN12G2367 Fragaria x ananassa HOM05D008187 ORTHO05D009830 5.0e-15 84.7 127 44.9
Hma1.2p1_0441F.1_g153840 Hydrangea macrophylla HOM05D008187 ORTHO05D009830 5.0e-15 84.7 127 38.6
Phvul.002G184100 Phaseolus vulgaris HOM05D008187 ORTHO05D009830 5.0e-15 84.7 117 49.6
Potri.010G101500 Populus trichocarpa HOM05D008187 ORTHO05D009830 6.5e-15 84.3 122 43.4
Glyma.05G137300 Glycine max HOM05D008187 ORTHO05D009830 8.5e-15 84.0 119 47.9
Sabra10G0074300 Salix brachista HOM05D008187 ORTHO05D009830 1.1e-14 83.6 123 42.3
FAN07G0781 Fragaria x ananassa HOM05D008187 ORTHO05D009830 1.5e-14 83.2 127 44.1
FvH4_4g26140 Fragaria vesca HOM05D008187 ORTHO05D009830 1.9e-14 82.8 127 44.1
FAN12G2898 Fragaria x ananassa HOM05D008187 ORTHO05D009830 1.9e-14 82.8 127 44.1
Glyma.08G092600 Glycine max HOM05D008187 ORTHO05D009830 1.9e-14 82.8 120 48.3
FAN17G0865 Fragaria x ananassa HOM05D008187 ORTHO05D009830 3.2e-14 82.0 127 44.1
FAN22G0157 Fragaria x ananassa HOM05D008187 ORTHO05D009830 4.2e-14 81.6 127 43.3
Potri.008G140000 Populus trichocarpa HOM05D008187 ORTHO05D009830 7.2e-14 80.9 123 41.5
CSS0005647 Camellia sinensis var. sinensis HOM05D008187 ORTHO05D009830 2.1e-13 79.3 120 45.0
Atru.chr11.1001 Acer truncatum HOM05D008187 ORTHO05D009830 1.4e-12 76.6 128 41.4
Manes.17G089700 Manihot esculenta HOM05D008187 ORTHO05D009830 1.4e-12 76.6 121 44.6
Prupe.1G338300 Prunus persica HOM05D008187 ORTHO05D009830 1.4e-12 76.6 127 39.4
Sabra08G0106100 Salix brachista HOM05D008187 ORTHO05D009830 6.8e-12 74.3 119 42.0
Eucgr.B02651 Eucalyptus grandis HOM05D008187 ORTHO05D009830 1.5e-11 73.2 118 40.7
CANSAT78G2356 Cannabis sativa HOM05D008187 ORTHO05D009830 2.0e-11 72.8 135 37.0
TAR622G0296 Trochodendron aralioides HOM05D008187 ORTHO05D009830 2.0e-11 72.8 117 44.4
Gohir.D04G188100 Gossypium hirsutum HOM05D008187 ORTHO05D009830 5.7e-11 71.2 122 41.0
Gorai.012G183500 Gossypium raimondii HOM05D008187 ORTHO05D009830 7.5e-11 70.9 123 40.7
ECA234G1527 Erigeron canadensis HOM05D005481 ORTHO05D006779 2.2e-10 69.3 122 40.2
MBI19_g01917_MAGBIO Magnolia biondii HOM05D003603 ORTHO05D009830 2.2e-10 69.3 115 44.3
Lj6A731T87 Lonicera japonica HOM05D008187 ORTHO05D009830 4.8e-10 68.2 121 36.4
Gohir.A04G143800 Gossypium hirsutum HOM05D008187 ORTHO05D009830 1.1e-09 67.0 122 40.2
HanXRQChr16g0527611 Helianthus annuus HOM05D008187 ORTHO05D009830 1.1e-09 67.0 126 37.3
MD16G1013000 Malus domestica HOM05D008187 ORTHO05D009830 1.1e-09 67.0 127 36.2
Rhsim09G0085300 Rhododendron simsii HOM05D008187 ORTHO05D009830 1.8e-09 66.2 120 36.7
FAN17G0113 Fragaria x ananassa HOM05D008187 ORTHO05D009830 4.1e-09 65.1 90 44.4
Lsat_1_v5_gn_4_24181 Lactuca sativa HOM05D008187 ORTHO05D009830 1.2e-08 63.5 116 37.1
BcaC04g21548 Brassica carinata HOM05D010619 ORTHO05D009830 2.3e-07 59.3 119 35.3
Actinidia34059 Actinidia chinensis HOM05D008187 ORTHO05D009830 2.9e-07 58.9 123 38.2
THA.LOC104805100 Tarenaya hassleriana HOM05D010619 ORTHO05D009830 3.8e-07 58.5 119 37.8
C09p30500 Brassica napus HOM05D010619 ORTHO05D009830 6.6e-07 57.8 119 34.5
BcaB07g30724 Brassica carinata HOM05D010619 ORTHO05D009830 1.1e-06 57.0 124 34.7
BolC9t55912H Brassica oleracea HOM05D010619 ORTHO05D009830 1.1e-06 57.0 119 34.5
AT2G01913 Arabidopsis thaliana HOM05D010619 ORTHO05D009830 1.9e-06 56.2 119 36.1
TPR.G11831 Trifolium pratense HOM05D008187 ORTHO05D009830 1.9e-06 56.2 74 43.2
Sp2g13350 Schrenkiella parvula HOM05D010619 ORTHO05D009830 2.5e-06 55.8 109 35.8
DCAR_026822 Daucus carota HOM05D008187 ORTHO05D009830 3.3e-06 55.5 128 34.4
HanXRQChr17g0566281 Helianthus annuus HOM05D008187 ORTHO05D009830 3.3e-06 55.5 75 37.3
A09p23610 Brassica napus HOM05D010619 ORTHO05D009830 4.2e-06 55.1 120 35.8
BraA09t37965Z Brassica rapa HOM05D010619 ORTHO05D009830 4.2e-06 55.1 120 35.8
DCAR_023540 Daucus carota HOM05D008187 ORTHO05D009830 5.5e-06 54.7 107 37.4
Actinidia38421 Actinidia chinensis HOM05D008187 ORTHO05D009830 9.5e-06 53.9 77 44.2


User provided reference genes

Program Settings