Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 4.9e-128 461.1 220 100.0
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 4.4e-113 411.4 230 88.3
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 3.4e-97 358.6 228 81.6
CsaV3_5G013210 Cucumis sativus L. HOM05D007059 ORTHO05D009155 5.6e-84 314.7 160 93.8
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 1.3e-77 293.5 238 63.9
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 5.1e-77 291.6 230 65.2
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 1.5e-76 290.0 238 63.4
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 3.3e-76 288.9 224 64.7
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 3.3e-76 288.9 224 64.7
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 9.6e-76 287.3 227 62.1
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 1.3e-75 287.0 224 64.7
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 1.2e-73 280.4 228 63.2
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 4.5e-73 278.5 224 63.8
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 1.0e-72 277.3 234 63.7
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 1.7e-72 276.6 238 60.1
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 2.2e-72 276.2 228 64.0
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 6.5e-72 274.6 230 63.5
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 6.5e-72 274.6 232 63.8
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 1.6e-70 270.0 228 61.4
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 2.1e-70 269.6 230 61.7
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 1.0e-69 267.3 244 58.6
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 1.0e-69 267.3 213 63.8
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 1.3e-69 266.9 226 62.4
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 3.0e-69 265.8 217 63.1
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 3.9e-69 265.4 227 62.6
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 3.3e-68 262.3 217 62.7
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 5.7e-68 261.5 230 61.3
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 5.7e-68 261.5 215 60.9
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 9.7e-68 260.8 222 61.7
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 1.3e-67 260.4 220 61.8
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 4.8e-67 258.5 226 59.3
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 1.4e-66 256.9 230 59.1
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 1.8e-66 256.5 222 59.0
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 2.4e-66 256.1 228 59.6
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 3.1e-66 255.8 233 60.1
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 3.1e-66 255.8 228 59.6
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 5.3e-66 255.0 233 60.1
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 5.3e-66 255.0 186 69.4
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 5.3e-66 255.0 216 62.5
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 5.3e-66 255.0 187 68.4
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 6.9e-66 254.6 235 61.3
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 2.0e-65 253.1 220 58.6
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 2.0e-65 253.1 173 72.8
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 4.5e-65 251.9 173 71.7
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 5.9e-65 251.5 227 58.6
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 1.0e-64 250.8 228 59.6
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 1.0e-64 250.8 173 72.3
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 1.3e-64 250.4 181 69.1
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 1.3e-64 250.4 230 59.1
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 2.9e-64 249.2 163 74.8
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 2.9e-64 249.2 152 79.6
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 1.1e-63 247.3 167 73.1
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.6e-62 243.4 209 60.8
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.6e-62 243.4 209 60.8
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 1.6e-62 243.4 230 57.0
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 4.6e-62 241.9 167 71.3
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 6.1e-62 241.5 172 69.8
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 7.9e-62 241.1 173 68.2
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 7.9e-62 241.1 173 68.2
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 7.9e-62 241.1 173 68.2
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 2.3e-61 239.6 150 77.3
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 6.7e-61 238.0 170 68.2
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 8.8e-61 237.7 170 68.8
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 8.8e-61 237.7 227 57.3
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 2.0e-60 236.5 236 54.7
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 2.6e-60 236.1 170 68.2
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 5.7e-60 235.0 229 54.6
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 7.4e-60 234.6 156 73.7
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 7.4e-60 234.6 128 86.7
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 7.4e-60 234.6 167 71.9
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 9.7e-60 234.2 218 57.3
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 2.2e-59 233.0 131 83.2
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 2.8e-59 232.6 173 66.5
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 2.8e-59 232.6 173 66.5
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 2.8e-59 232.6 200 60.0
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 3.7e-59 232.3 126 86.5
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 3.7e-59 232.3 170 67.1
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 1.8e-58 229.9 152 72.4
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 4.1e-58 228.8 128 84.4
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 3.4e-57 225.7 128 81.2
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 7.7e-57 224.6 209 57.4
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 3.8e-56 222.2 232 54.7
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 3.8e-56 222.2 156 69.9
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 3.8e-56 222.2 156 69.9
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 1.9e-55 219.9 126 81.7
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 4.2e-55 218.8 150 72.7
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 4.7e-54 215.3 211 54.5
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 7.4e-52 208.0 156 66.7
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 4.8e-51 205.3 222 50.0
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 8.2e-51 204.5 125 77.6
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 1.1e-50 204.1 150 64.0
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 7.7e-49 198.0 152 63.8
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 2.2e-48 196.4 147 66.7
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 6.5e-48 194.9 167 56.3
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 5.5e-47 191.8 143 64.3
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 7.2e-47 191.4 170 61.2
Dinv01917 Davidia involucrata HOM05D007059 ORTHO05D009155 2.0e-44 183.3 226 48.2
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 1.6e-41 173.7 167 55.7
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 1.2e-38 164.1 228 43.9
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 5.7e-36 155.2 122 58.2
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 4.1e-34 149.1 130 61.5
AT3G19900 Arabidopsis thaliana HOM05D007059 ORTHO05D009155 4.3e-23 112.5 143 46.9
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 1.4e-21 107.5 56 87.5
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 2.6e-20 103.2 84 66.7
SEGI_27177 Sequoiadendron giganteum HOM05D007059 ORTHO05D009155 2.2e-19 100.1 61 75.4
SMO364G0884 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 1.0e-16 91.3 65 69.2
Cre01.g007050 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D009155 3.0e-16 89.7 187 34.2
Cre03.g197850 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D034487 6.8e-13 78.6 113 34.5
BraA05t21808Z Brassica rapa HOM05D007059 ORTHO05D040342 9.2e-10 68.2 45 73.3
MCO14G049 Micromonas commoda HOM05D007059 ORTHO05D009155 1.2e-09 67.8 101 36.6
A05p29230 Brassica napus HOM05D007059 ORTHO05D040342 7.8e-09 65.1 45 71.1


User provided reference genes

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