Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C020015.2 Cucumis melo HOM05D005553 ORTHO05D006866 0.0e+00 1130.9 566 100.0
CsaV3_6G002380 Cucumis sativus L. HOM05D005553 ORTHO05D006866 1.6e-308 1062.0 556 95.5
Sed0021986 Sechium edule HOM05D005553 ORTHO05D006866 8.1e-268 926.8 560 83.8
ClCG09G008830 Citrullus lanatus HOM05D005553 ORTHO05D006866 4.0e-267 924.5 558 85.3
Prupe.8G200200 Prunus persica HOM05D005553 ORTHO05D006866 2.5e-208 729.2 560 64.6
CSS0002030 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 5.5e-208 728.0 566 65.4
Cfa002842 Carpinus fangiana HOM05D005553 ORTHO05D006866 2.7e-207 725.7 565 65.1
CANSAT01G0440 Cannabis sativa HOM05D005553 ORTHO05D006866 7.9e-207 724.2 553 65.1
MD10G1161200 Malus domestica HOM05D005553 ORTHO05D006866 1.5e-205 719.9 558 64.0
Dinv12662 Davidia involucrata HOM05D005553 ORTHO05D006866 3.3e-205 718.8 566 64.5
vmacro14742 Vaccinium macrocarpon HOM05D005553 ORTHO05D006866 5.7e-197 691.4 541 64.1
Manes.13G047900 Manihot esculenta HOM05D005553 ORTHO05D006866 2.7e-194 682.6 572 62.6
RcHm_v2.0_Chr6g0284311 Rosa chinensis HOM05D005553 ORTHO05D006866 4.5e-194 681.8 561 62.2
Lj2A1127T50 Lonicera japonica HOM05D005553 ORTHO05D006866 2.2e-193 679.5 563 61.1
Nn1g07927 Nelumbo nucifera HOM05D005553 ORTHO05D006866 3.8e-193 678.7 562 61.6
CSS0038931 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 8.5e-193 677.6 566 62.2
Hma1.2p1_1018F.1_g248400 Hydrangea macrophylla HOM05D005553 ORTHO05D006866 2.5e-192 676.0 528 64.2
PGR044G2083 Punica granatum HOM05D005553 ORTHO05D006866 3.2e-192 675.6 557 61.4
Cpa.g.sc8.131 Carica papaya HOM05D005553 ORTHO05D006866 7.2e-192 674.5 568 61.6
FAN24G0205 Fragaria x ananassa HOM05D005553 ORTHO05D006866 3.6e-191 672.2 557 61.9
FvH4_2g18680 Fragaria vesca HOM05D005553 ORTHO05D006866 8.0e-191 671.0 557 61.9
FAN27G0725 Fragaria x ananassa HOM05D005553 ORTHO05D006866 8.0e-191 671.0 561 61.7
TWI36G0825 Tripterygium wilfordii HOM05D005553 ORTHO05D006866 1.0e-190 670.6 560 62.7
PSO339G3667 Papaver somniferum HOM05D005553 ORTHO05D006866 1.8e-190 669.8 544 60.8
Eucgr.K02143 Eucalyptus grandis HOM05D005553 ORTHO05D006866 9.8e-189 664.1 563 60.9
PSO063G5023 Papaver somniferum HOM05D005553 ORTHO05D006866 2.8e-188 662.5 539 59.7
PSO782G3165 Papaver somniferum HOM05D005553 ORTHO05D006866 8.3e-188 661.0 559 58.9
Hund05570 Selenicereus undatus HOM05D005553 ORTHO05D006866 4.1e-187 658.7 555 59.6
DCAR_023559 Daucus carota HOM05D005553 ORTHO05D006866 5.4e-187 658.3 553 60.4
Sc05g0002010 Simmondsia chinensis HOM05D005553 ORTHO05D006866 3.5e-186 655.6 555 60.5
Thecc.01G222300 Theobroma cacao HOM05D005553 ORTHO05D006866 3.5e-186 655.6 537 62.8
Ciclev10019403m.g Citrus clementina HOM05D005553 ORTHO05D006866 1.0e-185 654.1 562 61.4
Gorai.001G232700 Gossypium raimondii HOM05D005553 ORTHO05D006866 3.8e-185 652.1 567 60.8
HanXRQChr07g0189551 Helianthus annuus HOM05D005553 ORTHO05D006866 1.5e-184 650.2 566 59.5
Ah.08g214520 Amaranthus hybridus HOM05D005553 ORTHO05D006866 2.5e-184 649.4 573 57.8
Oeu023098.1 Olea europaea HOM05D005553 ORTHO05D006866 7.2e-184 647.9 558 59.3
MSTRG.17999 Avicennia marina HOM05D005553 ORTHO05D006866 9.4e-184 647.5 557 59.8
THA.LOC104818968 Tarenaya hassleriana HOM05D005553 ORTHO05D006866 1.6e-183 646.7 566 59.7
COL.COLO4_15644 Corchorus olitorius HOM05D005553 ORTHO05D006866 2.1e-183 646.4 554 60.3
Gohir.D07G206400 Gossypium hirsutum HOM05D005553 ORTHO05D006866 2.1e-183 646.4 566 60.4
Migut.N00626 Erythranthe guttata HOM05D005553 ORTHO05D006866 2.7e-183 646.0 558 58.1
Duzib138G1946 Durio zibethinus HOM05D005553 ORTHO05D006866 4.7e-183 645.2 563 59.7
Rhsim01G0254300 Rhododendron simsii HOM05D005553 ORTHO05D006866 4.7e-183 645.2 542 60.7
Potri.002G245000 Populus trichocarpa HOM05D005553 ORTHO05D006866 8.0e-183 644.4 564 59.9
PGSC0003DMG400017493 Solanum tuberosum HOM05D005553 ORTHO05D006866 1.4e-182 643.7 558 58.6
arahy.Tifrunner.gnm1.ann1.T3HSIJ Arachis hypogaea HOM05D005553 ORTHO05D006866 3.0e-182 642.5 556 57.9
Lsat_1_v5_gn_9_13060 Lactuca sativa HOM05D005553 ORTHO05D006866 3.0e-182 642.5 562 59.1
Gohir.A07G200000 Gossypium hirsutum HOM05D005553 ORTHO05D006866 5.2e-182 641.7 566 60.4
Aqoxy2G03234 Aquilegia oxysepala HOM05D005553 ORTHO05D006866 6.8e-182 641.3 561 57.2
Sabra02G0186400 Salix brachista HOM05D005553 ORTHO05D006866 8.8e-182 641.0 564 60.1
GSVIVG01038357001 Vitis vinifera HOM05D005553 ORTHO05D006866 1.2e-181 640.6 530 60.9
QL09p052121 Quercus lobata HOM05D005553 ORTHO05D006866 1.5e-181 640.2 562 59.4
BcaC05g29748 Brassica carinata HOM05D005553 ORTHO05D006866 3.4e-181 639.0 560 59.1
AL3G18430 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 4.4e-181 638.6 543 59.7
Lj1g0021333 Lotus japonicus HOM05D005553 ORTHO05D006866 7.5e-181 637.9 558 58.8
QL09p052989 Quercus lobata HOM05D005553 ORTHO05D006866 9.8e-181 637.5 562 59.1
VMungo1383G1602 Vigna mungo HOM05D005553 ORTHO05D006866 9.8e-181 637.5 556 57.7
AT3G07180 Arabidopsis thaliana HOM05D005553 ORTHO05D006866 1.3e-180 637.1 543 59.7
Thhalv10020331m.g Eutrema salsugineum HOM05D005553 ORTHO05D006866 2.2e-180 636.3 566 59.2
Medtr7g056117 Medicago truncatula HOM05D005553 ORTHO05D006866 2.2e-180 636.3 560 58.6
Sp3g06120 Schrenkiella parvula HOM05D005553 ORTHO05D006866 2.8e-180 636.0 566 59.2
CARHR081820 Cardamine hirsuta HOM05D005553 ORTHO05D006866 3.7e-180 635.6 566 59.2
Lalb_Chr03g0041571 Lupinus albus HOM05D005553 ORTHO05D006866 3.7e-180 635.6 555 58.9
CiPaw.03G146800 Carya illinoinensis HOM05D005553 ORTHO05D006866 4.9e-180 635.2 483 65.4
Solyc09g059600.4 Solanum lycopersicum HOM05D005553 ORTHO05D006866 1.4e-179 633.6 558 57.7
arahy.Tifrunner.gnm1.ann1.K25WW2 Arachis hypogaea HOM05D005553 ORTHO05D006866 1.8e-179 633.3 559 57.6
Ca_24091_v3 Cicer arietinum L. HOM05D005553 ORTHO05D006866 2.4e-179 632.9 563 57.7
Phvul.008G130400 Phaseolus vulgaris HOM05D005553 ORTHO05D006866 2.4e-179 632.9 556 57.6
Sopen09g022770 Solanum pennellii HOM05D005553 ORTHO05D006866 3.1e-179 632.5 558 57.9
Carub.0003s0670 Capsella rubella HOM05D005553 ORTHO05D006866 4.1e-179 632.1 545 59.6
Glyma.18G166600 Glycine max HOM05D005553 ORTHO05D006866 7.0e-179 631.3 557 56.7
BraA05t22829Z Brassica rapa HOM05D005553 ORTHO05D006866 5.9e-178 628.2 568 58.6
Nitab4.5_0000045g0420 Nicotiana tabacum HOM05D005553 ORTHO05D006866 7.7e-178 627.9 588 56.0
A05p41030 Brassica napus HOM05D005553 ORTHO05D006866 3.8e-177 625.5 568 58.5
Atru.chr6.1417 Acer truncatum HOM05D005553 ORTHO05D006866 8.6e-177 624.4 550 59.6
BcaC05g29847 Brassica carinata HOM05D005553 ORTHO05D006866 8.6e-177 624.4 539 60.1
CAN.G5.44 Capsicum annuum HOM05D005553 ORTHO05D006866 4.3e-176 622.1 553 56.8
C05p60190 Brassica napus HOM05D005553 ORTHO05D006866 3.6e-175 619.0 539 59.7
BolC5t34669H Brassica oleracea HOM05D005553 ORTHO05D006866 3.6e-175 619.0 539 59.7
AL384U10020 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 6.1e-175 618.2 538 59.1
Duzib211G0174 Durio zibethinus HOM05D005553 ORTHO05D006866 1.0e-174 617.5 547 60.5
Glyma.08G349700 Glycine max HOM05D005553 ORTHO05D006866 1.5e-173 613.6 530 57.7
Psat3g147960 Pisum sativum HOM05D005553 ORTHO05D006866 1.5e-173 613.6 560 56.2
Aa31LG5G17740 Aethionema arabicum HOM05D005553 ORTHO05D006866 2.6e-173 612.8 570 56.7
Haze_24835 Corylus avellana HOM05D005553 ORTHO05D006866 5.7e-173 611.7 565 58.2
Cc01_g16820 Coffea canephora HOM05D005553 ORTHO05D006866 3.7e-172 609.0 532 58.3
MBI06_g04543_MAGBIO Magnolia biondii HOM05D005553 ORTHO05D006866 3.7e-172 609.0 566 55.1
Nitab4.5_0000345g0010 Nicotiana tabacum HOM05D005553 ORTHO05D006866 4.1e-171 605.5 593 54.5
FAN15G3597 Fragaria x ananassa HOM05D005553 ORTHO05D006866 1.5e-168 597.0 609 54.7
ECA247G0750 Erigeron canadensis HOM05D005553 ORTHO05D006866 5.6e-168 595.1 542 58.3
EL10Ac7g17878 Beta vulgaris HOM05D005553 ORTHO05D006866 3.6e-167 592.4 540 56.5
arahy.Tifrunner.gnm1.ann1.84RPTF Arachis hypogaea HOM05D005553 ORTHO05D006866 4.1e-163 578.9 552 54.9
arahy.Tifrunner.gnm1.ann1.62F6YN Arachis hypogaea HOM05D005553 ORTHO05D006866 3.0e-161 572.8 539 55.8
TPR.G6452 Trifolium pratense HOM05D005553 ORTHO05D006866 2.5e-160 569.7 566 53.7
Actinidia09473 Actinidia chinensis HOM05D005553 ORTHO05D006866 4.0e-158 562.4 558 54.3
ATR0609G062 Amborella trichopoda HOM05D005553 ORTHO05D006866 4.0e-158 562.4 538 53.5
TAR365G1156 Trochodendron aralioides HOM05D005553 ORTHO05D006866 6.8e-158 561.6 453 60.9
CDE08G1475 Ceratophyllum demersum HOM05D005553 ORTHO05D006866 1.5e-157 560.5 562 50.4
Haze_24838 Corylus avellana HOM05D005553 ORTHO05D006866 2.0e-157 560.1 565 54.3
Actinidia23714 Actinidia chinensis HOM05D005553 ORTHO05D006866 2.3e-153 546.6 567 53.3
Peaxi162Scf00238g00217 Petunia axillaris HOM05D005553 ORTHO05D006866 4.3e-152 542.3 543 54.0
AUR62001118 Chenopodium quinoa HOM05D005553 ORTHO05D006866 6.8e-150 535.0 557 50.4
Os01g0907300 Oryza sativa ssp. japonica HOM05D005553 ORTHO05D006866 7.6e-149 531.6 560 50.5
SalBow3G3653 Salvia bowleyana HOM05D005553 ORTHO05D006866 1.4e-147 527.3 476 56.9
DCAR_000631 Daucus carota HOM05D005553 ORTHO05D006866 3.2e-147 526.2 554 51.6
Zm00001eb365330 Zea mays HOM05D005553 ORTHO05D006866 3.9e-145 519.2 551 49.7
SHI14561 Sapria himalayana HOM05D005553 ORTHO05D006866 7.3e-144 515.0 546 51.8
arahy.Tifrunner.gnm1.ann1.B0WXN9 Arachis hypogaea HOM05D005553 ORTHO05D006866 7.3e-136 488.4 550 47.8
Dinv19184 Davidia involucrata HOM05D005553 ORTHO05D006866 7.3e-136 488.4 429 59.0
AUR62016558 Chenopodium quinoa HOM05D005553 ORTHO05D006866 1.2e-133 481.1 557 46.9
Potri.002G244801 Populus trichocarpa HOM05D005553 ORTHO05D006866 4.2e-131 472.6 299 73.9
unitig_0.g372 Utricularia gibba HOM05D005553 ORTHO05D006866 1.9e-104 384.0 520 44.4
Pp3c13_19160 Physcomitrium patens HOM05D005553 ORTHO05D006866 6.3e-103 379.0 558 41.0
Mapoly0045s0104 Marchantia polymorpha HOM05D005553 ORTHO05D006866 1.4e-99 367.9 569 36.9
arahy.Tifrunner.gnm1.ann1.ET68I8 Arachis hypogaea HOM05D005553 ORTHO05D006866 1.5e-96 357.8 359 51.5
AagrBONN_evm.TU.Sc2ySwM_117.1632 Anthoceros agrestis HOM05D005553 ORTHO05D006866 4.5e-93 346.3 546 37.0
SMO353G0187 Selaginella moellendorffii HOM05D005553 ORTHO05D006866 1.4e-89 334.7 536 37.5
arahy.Tifrunner.gnm1.ann1.SPK719 Arachis hypogaea HOM05D005553 ORTHO05D006866 2.3e-89 334.0 382 48.2
arahy.Tifrunner.gnm1.ann1.YI9T1V Arachis hypogaea HOM05D005553 ORTHO05D006866 1.2e-85 321.6 396 46.5
QL05p022419 Quercus lobata HOM05D005553 ORTHO05D006866 1.0e-84 318.5 244 60.7
QL02p097148 Quercus lobata HOM05D005553 ORTHO05D006866 3.1e-70 270.4 326 45.4
arahy.Tifrunner.gnm1.ann1.DF0SS3 Arachis hypogaea HOM05D005553 ORTHO05D006866 1.0e-60 238.8 362 40.1
CBR_g46590 Chara braunii HOM05D005553 ORTHO05D006866 5.6e-59 233.0 404 33.4
HPP92_001419 Vanilla planifolia HOM05D005553 ORTHO05D008496 9.2e-54 215.7 184 57.6
HPP92_001410 Vanilla planifolia HOM05D005553 ORTHO05D006866 5.9e-53 213.0 198 56.1
arahy.Tifrunner.gnm1.ann1.3A36EA Arachis hypogaea HOM05D005553 ORTHO05D006866 1.1e-43 182.2 135 65.2
SEGI_34191 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 6.4e-31 139.8 147 45.6
SEGI_35984 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 2.4e-30 137.9 288 35.1
EL10Ac7g17877 Beta vulgaris HOM05D005553 ORTHO05D006866 4.0e-25 120.6 189 40.2
arahy.Tifrunner.gnm1.ann1.UUY44J Arachis hypogaea HOM05D005553 ORTHO05D006866 2.6e-24 117.9 236 34.3
A05p41020 Brassica napus HOM05D005553 ORTHO05D006866 2.1e-18 98.2 227 34.8
Cfa026900 Carpinus fangiana HOM05D005553 ORTHO05D006866 6.9e-17 93.2 563 23.1
Cre01.g013400 Chlamydomonas reinhardtii HOM05D005553 ORTHO05D006866 1.5e-16 92.0 383 23.5
TAR365G0595 Trochodendron aralioides HOM05D005553 ORTHO05D006866 5.4e-14 83.6 108 49.1
VMungo1383G0327 Vigna mungo HOM05D005553 ORTHO05D006866 4.9e-07 60.5 59 52.5


User provided reference genes

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