Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C019965.2 Cucumis melo HOM05D007372 ORTHO05D009318 8.4e-152 540.4 294 100.0
CsaV3_6G004890 Cucumis sativus L. HOM05D007372 ORTHO05D009318 7.2e-135 484.2 294 91.5
ClCG08G007220 Citrullus lanatus HOM05D007372 ORTHO05D009318 8.5e-112 407.5 303 76.6
Sed0016879 Sechium edule HOM05D007372 ORTHO05D009318 6.2e-78 295.0 297 61.6
Gohir.D02G067900 Gossypium hirsutum HOM05D007372 ORTHO05D009318 4.8e-30 136.0 307 35.8
Gorai.005G076700 Gossypium raimondii HOM05D007372 ORTHO05D009318 6.3e-30 135.6 307 35.8
Cfa018264 Carpinus fangiana HOM05D007372 ORTHO05D009318 2.4e-29 133.7 303 33.7
Dinv02471 Davidia involucrata HOM05D007372 ORTHO05D009318 2.4e-29 133.7 189 43.4
Gohir.A02G062200 Gossypium hirsutum HOM05D007372 ORTHO05D009318 2.4e-29 133.7 307 35.8
Haze_17824 Corylus avellana HOM05D007372 ORTHO05D009318 5.3e-29 132.5 305 34.1
Sabra02G0050700 Salix brachista HOM05D007372 ORTHO05D009318 1.2e-28 131.3 300 35.7
Manes.02G185100 Manihot esculenta HOM05D007372 ORTHO05D009318 3.4e-28 129.8 302 34.4
Eucgr.F02675 Eucalyptus grandis HOM05D007372 ORTHO05D009318 5.9e-28 129.0 294 36.7
Potri.002G062800 Populus trichocarpa HOM05D007372 ORTHO05D009318 5.9e-28 129.0 193 44.0
COL.COLO4_24577 Corchorus olitorius HOM05D007372 ORTHO05D009318 3.2e-26 123.2 154 46.1
Rhsim06G0093000 Rhododendron simsii HOM05D007372 ORTHO05D009318 4.2e-26 122.9 306 33.3
GSVIVG01013700001 Vitis vinifera HOM05D007372 ORTHO05D009318 4.2e-26 122.9 156 47.4
PGR042G0625 Punica granatum HOM05D007372 ORTHO05D009318 9.4e-26 121.7 301 32.2
CiPaw.15G011400 Carya illinoinensis HOM05D007372 ORTHO05D009318 1.6e-25 120.9 320 33.8
Actinidia17763 Actinidia chinensis HOM05D007372 ORTHO05D009318 2.7e-25 120.2 302 33.1
Migut.C00154 Erythranthe guttata HOM05D007372 ORTHO05D009318 3.6e-25 119.8 315 32.7
Carub.0002s1852 Capsella rubella HOM05D007372 ORTHO05D009318 1.8e-24 117.5 161 45.3
THA.LOC104809747 Tarenaya hassleriana HOM05D007372 ORTHO05D009318 2.3e-24 117.1 310 31.6
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 8.8e-24 115.2 320 31.2
Aa31LG4G8880 Aethionema arabicum HOM05D007372 ORTHO05D009318 1.1e-23 114.8 160 44.4
CANSAT25G1084 Cannabis sativa HOM05D007372 ORTHO05D009318 2.6e-23 113.6 307 34.2
Cc10_g06440 Coffea canephora HOM05D007372 ORTHO05D009318 7.4e-23 112.1 163 44.2
MD05G1035800 Malus domestica HOM05D007372 ORTHO05D009318 9.7e-23 111.7 316 32.0
AL2G31330 Arabidopsis lyrata HOM05D007372 ORTHO05D009318 1.7e-22 110.9 166 42.8
Hma1.2p1_0678F.1_g202150 Hydrangea macrophylla HOM05D007372 ORTHO05D009318 2.8e-22 110.2 94 57.4
MBI01_g42373_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 2.8e-22 110.2 149 46.3
arahy.Tifrunner.gnm1.ann1.1F4W04 Arachis hypogaea HOM05D007372 ORTHO05D009318 4.8e-22 109.4 304 31.9
arahy.Tifrunner.gnm1.ann1.CL5RXG Arachis hypogaea HOM05D007372 ORTHO05D009318 4.8e-22 109.4 304 31.9
PSO675G2246 Papaver somniferum HOM05D007372 ORTHO05D009318 4.8e-22 109.4 119 53.8
SalBow7G3614 Salvia bowleyana HOM05D007372 ORTHO05D009318 6.3e-22 109.0 296 32.1
Duzib093G1977 Durio zibethinus HOM05D007372 ORTHO05D009318 8.2e-22 108.6 330 30.9
Nitab4.5_0007403g0010 Nicotiana tabacum HOM05D007372 ORTHO05D009318 4.1e-21 106.3 305 32.8
Sp5g26780 Schrenkiella parvula HOM05D007372 ORTHO05D009318 4.1e-21 106.3 162 42.0
TAR381G1194 Trochodendron aralioides HOM05D007372 ORTHO05D009318 4.1e-21 106.3 207 38.2
Solyc04g072040.1 Solanum lycopersicum HOM05D007372 ORTHO05D009318 5.3e-21 105.9 297 32.3
Sopen04g028150 Solanum pennellii HOM05D007372 ORTHO05D009318 5.3e-21 105.9 297 32.3
unitig_46.g18009 Utricularia gibba HOM05D007372 ORTHO05D009318 5.3e-21 105.9 300 32.3
AT1G71760 Arabidopsis thaliana HOM05D007372 ORTHO05D009318 9.1e-21 105.1 170 40.6
CARHR291030 Cardamine hirsuta HOM05D007372 ORTHO05D009318 9.1e-21 105.1 183 41.0
PSO541G3596 Papaver somniferum HOM05D007372 ORTHO05D009318 9.1e-21 105.1 122 52.5
BcaC08g46602 Brassica carinata HOM05D007372 ORTHO05D009318 1.2e-20 104.8 198 38.4
SGA_v2.0_scaffold82G26208 Striga asiatica HOM05D007372 ORTHO05D009318 1.2e-20 104.8 293 29.0
Aqoxy6G00438 Aquilegia oxysepala HOM05D007372 ORTHO05D009318 1.5e-20 104.4 305 30.2
MBI01_g29001_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 1.5e-20 104.4 297 31.6
Lsat_1_v5_gn_9_42440 Lactuca sativa HOM05D007372 ORTHO05D009318 2.0e-20 104.0 149 45.0
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 2.6e-20 103.6 314 29.9
A07p37910 Brassica napus HOM05D007372 ORTHO05D009318 3.4e-20 103.2 120 50.0
Thhalv10019840m.g Eutrema salsugineum HOM05D007372 ORTHO05D009318 4.5e-20 102.8 119 47.1
Nn5g28866 Nelumbo nucifera HOM05D007372 ORTHO05D009318 4.5e-20 102.8 161 42.2
Lj2g0008181 Lotus japonicus HOM05D007372 ORTHO05D009318 1.3e-19 101.3 308 28.6
CAN.G1183.23 Capsicum annuum HOM05D007372 ORTHO05D009318 2.2e-19 100.5 264 30.3
Cpa.g.sc26.120 Carica papaya HOM05D007372 ORTHO05D009318 2.2e-19 100.5 206 36.4
TWI60G0690 Tripterygium wilfordii HOM05D007372 ORTHO05D009318 3.8e-19 99.8 149 42.3
ATR1120G103 Amborella trichopoda HOM05D007372 ORTHO05D009318 6.5e-19 99.0 151 41.1
C06p45810 Brassica napus HOM05D007372 ORTHO05D009318 8.5e-19 98.6 119 48.7
Hund17499 Selenicereus undatus HOM05D007372 ORTHO05D009318 1.4e-18 97.8 308 30.8
Ah.05g168260 Amaranthus hybridus HOM05D007372 ORTHO05D009318 1.9e-18 97.4 312 29.8
BolC6t39633H Brassica oleracea HOM05D007372 ORTHO05D009318 2.5e-18 97.1 119 48.7
QL02p037053 Quercus lobata HOM05D007372 ORTHO05D009318 2.5e-18 97.1 314 30.6
VMungo0464G0612 Vigna mungo HOM05D007372 ORTHO05D009318 2.5e-18 97.1 118 47.5
QL02p036533 Quercus lobata HOM05D007372 ORTHO05D009318 4.2e-18 96.3 294 31.0
Phvul.004G088900 Phaseolus vulgaris HOM05D007372 ORTHO05D009318 5.5e-18 95.9 152 42.8
Glyma.02G077500 Glycine max HOM05D007372 ORTHO05D009318 7.2e-18 95.5 298 28.5
BraA07t31356Z Brassica rapa HOM05D007372 ORTHO05D009318 9.4e-18 95.1 117 49.6
Psat0ss32450g0040 Pisum sativum HOM05D007372 ORTHO05D009318 2.1e-17 94.0 305 29.2
TPR.G19684 Trifolium pratense HOM05D007372 ORTHO05D009318 2.1e-17 94.0 311 29.3
Sc26g0002770 Simmondsia chinensis HOM05D007372 ORTHO05D009318 2.7e-17 93.6 303 30.7
RcHm_v2.0_Chr6g0273891 Rosa chinensis HOM05D007372 ORTHO05D009318 7.9e-17 92.0 104 45.2
ECA232G4628 Erigeron canadensis HOM05D007372 ORTHO05D009318 5.2e-16 89.4 300 28.7
AUR62034913 Chenopodium quinoa HOM05D007372 ORTHO05D009318 6.7e-16 89.0 95 50.5
MSTRG.969 Avicennia marina HOM05D007372 ORTHO05D009318 1.1e-15 88.2 93 48.4
Nitab4.5_0004252g0050 Nicotiana tabacum HOM05D007372 ORTHO05D009318 1.5e-15 87.8 121 41.3
FvH4_2g12850 Fragaria vesca HOM05D007372 ORTHO05D009318 2.0e-15 87.4 106 43.4
Prupe.8G043800 Prunus persica HOM05D007372 ORTHO05D009318 3.3e-15 86.7 169 36.7
EL10Ac1g01626 Beta vulgaris HOM05D007372 ORTHO05D009318 5.7e-15 85.9 169 36.7
TPR.G19681 Trifolium pratense HOM05D007372 ORTHO05D009318 4.8e-14 82.8 306 28.1
Medtr1191s0010 Medicago truncatula HOM05D007372 ORTHO05D009318 6.3e-14 82.4 124 41.1
HPP92_004582 Vanilla planifolia HOM05D007372 ORTHO05D009318 1.1e-13 81.6 120 39.2
Os01g0716300 Oryza sativa ssp. japonica HOM05D007372 ORTHO05D009318 1.4e-13 81.3 118 39.0
Ca_04659_v3 Cicer arietinum L. HOM05D007372 ORTHO05D009318 2.4e-13 80.5 312 27.9
Lalb_Chr19g0129991 Lupinus albus HOM05D007372 ORTHO05D009318 2.4e-13 80.5 307 28.0
Ciclev10001857m.g Citrus clementina HOM05D007372 ORTHO05D009318 7.0e-13 79.0 48 75.0
Peaxi162Scf00360g00916 Petunia axillaris HOM05D007372 ORTHO05D009318 2.0e-12 77.4 302 29.1
Medtr0571s0030 Medicago truncatula HOM05D007372 ORTHO05D009318 2.6e-12 77.0 109 40.4
Zm00001eb361480 Zea mays HOM05D007372 ORTHO05D009318 1.3e-11 74.7 121 37.2
Mapoly0147s0022 Marchantia polymorpha HOM05D007372 ORTHO05D009318 2.2e-11 73.9 141 34.8
Rhsim04G0161000 Rhododendron simsii HOM05D007372 ORTHO05D009318 1.1e-10 71.6 81 50.6
Psat6g060160 Pisum sativum HOM05D007372 ORTHO05D009318 7.2e-10 68.9 125 36.0
Rhsim06G0189600 Rhododendron simsii HOM05D007372 ORTHO05D009318 1.6e-09 67.8 82 47.6
AagrBONN_evm.TU.Sc2ySwM_117.786 Anthoceros agrestis HOM05D007372 ORTHO05D009318 4.7e-09 66.2 118 36.4
HanXRQChr11g0343631 Helianthus annuus HOM05D007372 ORTHO05D009318 1.8e-08 64.3 123 39.0
Oeu046069.1 Olea europaea HOM05D007372 ORTHO05D009318 2.0e-07 60.8 131 32.8
SMO304G0033 Selaginella moellendorffii HOM05D007372 ORTHO05D009318 3.3e-07 60.1 96 39.6


User provided reference genes

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