Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 7.4e-127 457.2 231 100.0
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 2.6e-116 422.2 220 95.5
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 4.7e-81 305.1 220 75.5
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 3.1e-77 292.4 228 63.2
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 4.1e-77 292.0 209 67.9
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 7.0e-77 291.2 234 62.8
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 2.0e-76 289.7 221 65.2
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 2.7e-76 289.3 180 76.1
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 3.5e-76 288.9 198 71.7
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 6.6e-75 284.6 220 62.7
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 5.6e-74 281.6 184 72.8
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 5.6e-74 281.6 195 70.3
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 7.3e-74 281.2 229 63.8
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 7.3e-74 281.2 189 71.4
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 1.6e-73 280.0 184 72.3
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 1.6e-73 280.0 221 62.9
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 2.8e-73 279.3 227 62.1
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 4.7e-73 278.5 209 65.1
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 4.7e-73 278.5 194 68.6
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 8.0e-73 277.7 209 65.1
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 1.0e-72 277.3 203 67.0
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 1.4e-72 276.9 203 69.0
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 1.4e-72 276.9 184 72.8
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 1.8e-72 276.6 221 62.4
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 1.8e-72 276.6 183 72.7
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 2.3e-72 276.2 197 68.5
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 2.3e-72 276.2 186 70.4
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 2.3e-72 276.2 221 65.2
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 3.0e-72 275.8 185 70.8
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 3.0e-72 275.8 184 71.7
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 4.0e-72 275.4 176 73.9
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 6.8e-72 274.6 195 67.2
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 1.5e-71 273.5 222 62.6
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 1.5e-71 273.5 200 67.0
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 2.0e-71 273.1 199 65.3
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 2.0e-71 273.1 184 70.1
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 4.4e-71 271.9 177 71.8
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 7.5e-71 271.2 176 73.3
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 7.5e-71 271.2 229 59.4
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 1.3e-70 270.4 220 61.4
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 1.7e-70 270.0 198 67.2
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 1.7e-70 270.0 225 60.0
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 1.7e-70 270.0 228 59.6
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 2.9e-70 269.2 197 67.0
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 3.7e-70 268.9 228 60.5
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 4.9e-70 268.5 176 71.0
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 4.9e-70 268.5 228 61.0
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 6.4e-70 268.1 185 68.6
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 1.1e-69 267.3 204 65.7
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 1.4e-69 266.9 185 67.6
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 1.4e-69 266.9 200 65.5
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 1.4e-69 266.9 175 72.6
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 1.9e-69 266.5 184 69.0
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 2.4e-69 266.2 181 70.2
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 2.4e-69 266.2 200 66.5
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 4.1e-69 265.4 176 70.5
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 9.2e-69 264.2 231 60.6
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 9.2e-69 264.2 227 60.8
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 6.0e-68 261.5 193 64.2
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 1.7e-67 260.0 205 62.4
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 5.0e-67 258.5 188 64.4
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 9.5e-66 254.2 222 59.5
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 1.2e-65 253.8 222 59.0
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 2.8e-65 252.7 222 58.6
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 5.2e-64 248.4 176 65.3
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 1.2e-63 247.3 132 86.4
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 1.7e-62 243.4 227 55.5
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 1.2e-57 227.3 240 52.1
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 2.4e-53 213.0 140 72.1
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 3.0e-51 206.1 192 56.8
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 6.6e-51 204.9 174 55.2
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 7.3e-50 201.4 189 57.7
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 9.5e-50 201.1 133 69.2
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 3.6e-49 199.1 133 69.2
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 5.2e-48 195.3 204 48.5
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 8.4e-46 188.0 184 45.7
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 5.1e-43 178.7 146 58.9
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 2.5e-42 176.4 120 65.8
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 7.3e-42 174.9 106 75.5
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 1.2e-41 174.1 184 50.0
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 2.0e-39 166.8 119 61.3
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 6.6e-35 151.8 185 41.1
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 8.7e-35 151.4 168 47.0
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 1.8e-32 143.7 193 41.5
ECA234G0151 Erigeron canadensis HOM05D006652 ORTHO05D008645 3.1e-32 142.9 102 62.7
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 5.8e-31 138.7 170 42.4
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 1.3e-30 137.5 147 49.7
AUR62024835 Chenopodium quinoa HOM05D006652 ORTHO05D008645 1.7e-30 137.1 142 52.1
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 1.6e-28 130.6 180 40.6
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 1.8e-27 127.1 121 53.7
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 1.5e-23 114.0 167 40.7
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 3.8e-22 109.4 191 36.1
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 3.9e-19 99.4 88 52.3
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 1.5e-18 97.4 69 68.1
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 1.9e-18 97.1 158 36.1
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 2.8e-17 93.2 158 36.7
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 9.0e-16 88.2 172 32.6
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 1.2e-15 87.8 183 32.2
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 5.8e-15 85.5 123 39.8
Ah.07g202300 Amaranthus hybridus HOM05D006652 ORTHO05D008645 7.6e-15 85.1 57 68.4
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 1.3e-14 84.3 204 30.4
Ah.08g222620 Amaranthus hybridus HOM05D006652 ORTHO05D008645 6.0e-12 75.5 51 66.7
Haze_13352 Corylus avellana HOM05D006652 ORTHO05D008645 7.9e-12 75.1 137 36.5
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.0e-11 74.7 78 44.9
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 3.9e-11 72.8 169 29.0
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 8.7e-11 71.6 164 31.1
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 1.1e-10 71.2 104 35.6


User provided reference genes

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