Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C019630.2 Cucumis melo HOM05D007061 ORTHO05D009017 1.3e-202 709.5 360 100.0
CsaV3_6G013460 Cucumis sativus L. HOM05D007061 ORTHO05D009017 3.0e-191 671.8 348 97.7
ClCG02G018710 Citrullus lanatus HOM05D007061 ORTHO05D009017 5.8e-187 657.5 351 94.9
QL04p093744 Quercus lobata HOM05D007061 ORTHO05D009017 1.9e-158 562.8 381 74.0
Potri.010G173800 Populus trichocarpa HOM05D007061 ORTHO05D009017 4.1e-156 555.1 352 77.8
FvH4_3g14100 Fragaria vesca HOM05D007061 ORTHO05D009017 1.2e-155 553.5 353 77.1
FAN11G3441 Fragaria x ananassa HOM05D007061 ORTHO05D009017 1.2e-155 553.5 353 77.1
Atru.chr1.57 Acer truncatum HOM05D007061 ORTHO05D009017 3.4e-155 552.0 352 76.7
Eucgr.K03462 Eucalyptus grandis HOM05D007061 ORTHO05D009017 3.4e-155 552.0 351 75.8
MD10G1216400 Malus domestica HOM05D007061 ORTHO05D009017 4.5e-155 551.6 349 78.2
RcHm_v2.0_Chr5g0023411 Rosa chinensis HOM05D007061 ORTHO05D009017 1.0e-154 550.4 353 78.2
Sabra10G0133700 Salix brachista HOM05D007061 ORTHO05D009017 3.8e-154 548.5 352 76.7
TPR.G9404 Trifolium pratense HOM05D007061 ORTHO05D009017 3.8e-154 548.5 348 77.3
CiPaw.11G057200 Carya illinoinensis HOM05D007061 ORTHO05D009017 6.5e-154 547.7 351 76.1
Ciclev10004974m.g Citrus clementina HOM05D007061 ORTHO05D009017 1.1e-153 547.0 352 75.9
Psat4g170560 Pisum sativum HOM05D007061 ORTHO05D009017 1.1e-153 547.0 351 76.6
CANSAT35G1572 Cannabis sativa HOM05D007061 ORTHO05D009017 1.2e-152 543.5 340 79.4
Gohir.D07G048400 Gossypium hirsutum HOM05D007061 ORTHO05D009017 1.2e-152 543.5 357 73.9
Lj3g0003258 Lotus japonicus HOM05D007061 ORTHO05D009017 3.6e-152 542.0 349 76.5
THA.LOC104810275 Tarenaya hassleriana HOM05D007061 ORTHO05D009017 4.6e-152 541.6 351 75.8
Gorai.001G051600 Gossypium raimondii HOM05D007061 ORTHO05D009017 1.0e-151 540.4 357 73.4
Ca_23083_v3 Cicer arietinum L. HOM05D007061 ORTHO05D009017 1.8e-151 539.7 351 75.8
TAR627G0473 Trochodendron aralioides HOM05D007061 ORTHO05D009017 2.3e-151 539.3 350 75.4
Manes.16G047900 Manihot esculenta HOM05D007061 ORTHO05D009017 3.9e-151 538.5 352 76.4
arahy.Tifrunner.gnm1.ann1.69KP4R Arachis hypogaea HOM05D007061 ORTHO05D009017 1.5e-150 536.6 352 75.9
Dinv42463 Davidia involucrata HOM05D007061 ORTHO05D009017 1.5e-150 536.6 343 76.1
Glyma.08G234700 Glycine max HOM05D007061 ORTHO05D009017 2.2e-149 532.7 356 76.1
Hma1.2p1_0151F.1_g067030 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 4.8e-149 531.6 348 73.9
Duzib213G0730 Durio zibethinus HOM05D007061 ORTHO05D009017 6.3e-149 531.2 359 72.7
Nn7g38366 Nelumbo nucifera HOM05D007061 ORTHO05D009017 1.4e-148 530.0 350 74.9
Lalb_Chr03g0031881 Lupinus albus HOM05D007061 ORTHO05D009017 9.1e-148 527.3 353 74.8
AL1G64530 Arabidopsis lyrata HOM05D007061 ORTHO05D009017 5.9e-147 524.6 351 73.2
CARHR045980 Cardamine hirsuta HOM05D007061 ORTHO05D009017 8.5e-146 520.8 351 72.9
Prupe.4G128300 Prunus persica HOM05D007061 ORTHO05D009017 1.1e-145 520.4 318 78.9
Actinidia24658 Actinidia chinensis HOM05D007061 ORTHO05D009017 1.4e-145 520.0 352 71.3
FAN25G0842 Fragaria x ananassa HOM05D007061 ORTHO05D009017 2.5e-145 519.2 353 73.7
Aqoxy2G00253 Aquilegia oxysepala HOM05D007061 ORTHO05D009017 3.2e-145 518.8 352 74.1
Cc05_g16540 Coffea canephora HOM05D007061 ORTHO05D009017 3.2e-145 518.8 344 74.4
PGR044G2241 Punica granatum HOM05D007061 ORTHO05D009017 4.2e-145 518.5 346 73.1
Nitab4.5_0000029g0190 Nicotiana tabacum HOM05D007061 ORTHO05D009017 7.2e-145 517.7 345 73.0
FAN16G1770 Fragaria x ananassa HOM05D007061 ORTHO05D009017 3.6e-144 515.4 356 73.3
Peaxi162Scf00452g00232 Petunia axillaris HOM05D007061 ORTHO05D009017 7.9e-144 514.2 345 71.9
CSS0041382 Camellia sinensis var. sinensis HOM05D007061 ORTHO05D009017 1.0e-143 513.8 318 77.0
Sed0001021 Sechium edule HOM05D007061 ORTHO05D009017 6.7e-143 511.1 291 88.3
ECA240G0752 Erigeron canadensis HOM05D007061 ORTHO05D009017 1.5e-142 510.0 348 73.6
Aa31LG10G30 Aethionema arabicum HOM05D007061 ORTHO05D009017 2.0e-142 509.6 352 71.3
Sp1g41850 Schrenkiella parvula HOM05D007061 ORTHO05D009017 5.7e-142 508.1 355 71.8
PSO675G3863 Papaver somniferum HOM05D007061 ORTHO05D009017 3.7e-141 505.4 331 74.6
HanXRQChr03g0080291 Helianthus annuus HOM05D007061 ORTHO05D009017 8.2e-141 504.2 349 71.9
PSO675G0660 Papaver somniferum HOM05D007061 ORTHO05D009017 1.1e-140 503.8 331 74.9
Thhalv10011478m.g Eutrema salsugineum HOM05D007061 ORTHO05D009017 1.8e-140 503.1 351 70.1
Lsat_1_v5_gn_7_70001 Lactuca sativa HOM05D007061 ORTHO05D009017 2.6e-139 499.2 348 71.0
SalBow8G1458 Salvia bowleyana HOM05D007061 ORTHO05D009017 3.5e-139 498.8 349 70.2
Phvul.011G179100 Phaseolus vulgaris HOM05D007061 ORTHO05D009017 2.9e-138 495.7 299 81.3
vmacro11681 Vaccinium macrocarpon HOM05D007061 ORTHO05D009017 6.5e-138 494.6 319 74.6
SalBow8G1251 Salvia bowleyana HOM05D007061 ORTHO05D009017 1.5e-137 493.4 349 69.9
BcaB02g10820 Brassica carinata HOM05D007061 ORTHO05D009017 1.9e-137 493.0 357 69.7
A05p26620 Brassica napus HOM05D007061 ORTHO05D009017 2.5e-137 492.7 353 70.0
BraA05t21537Z Brassica rapa HOM05D007061 ORTHO05D009017 2.5e-137 492.7 353 70.0
SGA_v2.0_scaffold186G40180 Striga asiatica HOM05D007061 ORTHO05D009017 2.1e-136 489.6 349 69.9
AUR62037650 Chenopodium quinoa HOM05D007061 ORTHO05D009017 8.0e-136 487.6 319 74.0
CAN.G943.59 Capsicum annuum HOM05D007061 ORTHO05D009017 3.0e-135 485.7 348 70.1
C05p41210 Brassica napus HOM05D007061 ORTHO05D009017 1.1e-134 483.8 357 69.2
GSVIVG01036723001 Vitis vinifera HOM05D007061 ORTHO05D009017 1.5e-134 483.4 299 76.9
ATR0763G190 Amborella trichopoda HOM05D007061 ORTHO05D009017 2.4e-132 476.1 357 68.6
Lj2A10G39 Lonicera japonica HOM05D007061 ORTHO05D009017 4.1e-132 475.3 340 69.1
Carub.0001s4486 Capsella rubella HOM05D007061 ORTHO05D009017 3.5e-131 472.2 299 74.6
unitig_37.g12195 Utricularia gibba HOM05D007061 ORTHO05D009017 3.2e-129 465.7 334 66.8
Zm00001eb233280 Zea mays HOM05D007061 ORTHO05D009017 3.6e-128 462.2 330 69.1
DCAR_009658 Daucus carota HOM05D007061 ORTHO05D009017 3.0e-127 459.1 299 74.6
CDE01G0579 Ceratophyllum demersum HOM05D007061 ORTHO05D009017 3.4e-126 455.7 351 67.0
TWI59G0237 Tripterygium wilfordii HOM05D007061 ORTHO05D009017 4.4e-126 455.3 317 71.0
Thecc.07G189200 Theobroma cacao HOM05D007061 ORTHO05D009017 4.8e-125 451.8 298 74.5
VMungo1127G1118 Vigna mungo HOM05D007061 ORTHO05D009017 8.3e-125 451.1 295 77.3
arahy.Tifrunner.gnm1.ann1.RLLR5G Arachis hypogaea HOM05D007061 ORTHO05D009017 1.4e-124 450.3 563 47.2
Gohir.A07G044000 Gossypium hirsutum HOM05D007061 ORTHO05D009017 4.2e-121 438.7 357 63.6
Nitab4.5_0002862g0050 Nicotiana tabacum HOM05D007061 ORTHO05D009017 1.0e-119 434.1 387 60.2
Cpa.g.sc32.92 Carica papaya HOM05D007061 ORTHO05D009017 7.0e-116 421.4 258 78.7
COL.COLO4_24973 Corchorus olitorius HOM05D007061 ORTHO05D009017 2.8e-112 409.5 358 61.2
Os02g0173700 Oryza sativa ssp. japonica HOM05D007061 ORTHO05D009017 3.6e-112 409.1 279 70.3
BcaC05g28094 Brassica carinata HOM05D007061 ORTHO05D009017 1.2e-110 404.1 367 60.5
Sc03g0005020 Simmondsia chinensis HOM05D007061 ORTHO05D009017 2.4e-108 396.4 283 68.6
Pp3c22_13410 Physcomitrium patens HOM05D007061 ORTHO05D009017 3.5e-107 392.5 334 57.8
Migut.M01505 Erythranthe guttata HOM05D007061 ORTHO05D009017 4.3e-105 385.6 359 57.9
AagrBONN_evm.TU.Sc2ySwM_228.3482 Anthoceros agrestis HOM05D007061 ORTHO05D009017 3.6e-104 382.5 319 57.1
SMO145G0248 Selaginella moellendorffii HOM05D007061 ORTHO05D009017 1.7e-101 373.6 334 56.6
Haze_07765 Corylus avellana HOM05D007061 ORTHO05D009017 1.4e-100 370.5 299 64.5
Mapoly0013s0085 Marchantia polymorpha HOM05D007061 ORTHO05D009017 5.4e-100 368.6 354 53.1
BolC5t32863H Brassica oleracea HOM05D007061 ORTHO05D009017 7.8e-99 364.8 278 67.3
AT1G54310 Arabidopsis thaliana HOM05D007061 ORTHO05D009017 9.9e-86 321.2 229 69.0
arahy.Tifrunner.gnm1.ann1.R5CYRF Arachis hypogaea HOM05D007061 ORTHO05D009017 1.4e-79 300.8 229 69.9
Cre16.g649400 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 1.4e-76 290.8 365 42.7
Rhsim06G0244100 Rhododendron simsii HOM05D007061 ORTHO05D009017 5.1e-74 282.3 227 61.2
SEGI_31810 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 3.5e-67 259.6 199 63.8
PRCOL_00003223 Prasinoderma coloniale HOM05D007061 ORTHO05D009017 3.9e-66 256.1 357 39.5
MCO09G574 Micromonas commoda HOM05D007061 ORTHO05D009017 4.8e-56 222.6 365 37.8
Actinidia26210 Actinidia chinensis HOM05D007061 ORTHO05D009017 3.4e-54 216.5 155 69.7
MD05G1238000 Malus domestica HOM05D007061 ORTHO05D009017 1.5e-49 201.1 124 81.5
Rhsim06G0244000 Rhododendron simsii HOM05D007061 ORTHO05D009017 3.3e-49 199.9 123 77.2
SEGI_33801 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 1.1e-44 184.9 148 60.8
Hma1.2p1_0151F.1_g067050 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 6.1e-43 179.1 101 84.2
HPP92_028076 Vanilla planifolia HOM05D007061 ORTHO05D009017 2.2e-37 160.6 108 76.9
Cre09.g407900 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 1.1e-36 158.3 322 31.7
SGA_v2.0_scaffold112G31643 Striga asiatica HOM05D007061 ORTHO05D009017 1.0e-34 151.8 107 75.7
SGA_v2.0_scaffold60G20904 Striga asiatica HOM05D007061 ORTHO05D009017 1.0e-34 151.8 107 75.7
RcHm_v2.0_Chr1g0324361 Rosa chinensis HOM05D007061 ORTHO05D009017 4.5e-30 136.3 73 87.7
AUR62041050 Chenopodium quinoa HOM05D007061 ORTHO05D009017 1.0e-18 98.6 62 71.0
Lsat_1_v5_gn_4_131100 Lactuca sativa HOM05D007061 ORTHO05D004266 4.2e-12 76.6 45 75.6
MCO14G211 Micromonas commoda HOM05D027329 ORTHO05D268215 8.8e-10 68.9 118 32.2
Lsat_1_v5_gn_3_11400 Lactuca sativa HOM05D003461 ORTHO05D004386 4.1e-07 60.1 81 43.2


User provided reference genes

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