Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C019608.2 Cucumis melo HOM05D007449 ORTHO05D009504 2.1e-109 399.1 202 100.0
CsaV3_6G013330 Cucumis sativus L. HOM05D007449 ORTHO05D009504 5.2e-84 314.7 171 94.2
Sed0001463 Sechium edule HOM05D007449 ORTHO05D009504 2.0e-80 302.8 169 88.8
ClCG02G018850 Citrullus lanatus HOM05D007449 ORTHO05D009504 7.7e-80 300.8 168 90.5
GSVIVG01036691001 Vitis vinifera HOM05D007449 ORTHO05D009504 3.5e-72 275.4 160 83.8
FAN21G0170 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.2e-69 266.9 183 73.2
RcHm_v2.0_Chr5g0022981 Rosa chinensis HOM05D007449 ORTHO05D009504 1.6e-69 266.5 154 82.5
FvH4_3g13790 Fragaria vesca HOM05D007449 ORTHO05D009504 2.1e-69 266.2 158 81.6
FAN11G1945 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.8e-68 263.1 159 81.8
FAN16G1652 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.2e-67 260.4 181 71.8
Prupe.4G124700 Prunus persica HOM05D007449 ORTHO05D009504 1.2e-67 260.4 154 81.8
Hma1.2p1_1417F.1_g282110 Hydrangea macrophylla HOM05D007449 ORTHO05D009504 1.5e-67 260.0 167 77.8
Nn1g09860 Nelumbo nucifera HOM05D007449 ORTHO05D009504 1.5e-67 260.0 161 80.1
Sabra10G0135300 Salix brachista HOM05D007449 ORTHO05D009504 7.5e-67 257.7 168 75.0
Dinv42450 Davidia involucrata HOM05D007449 ORTHO05D009504 9.8e-67 257.3 161 79.5
Potri.010G175600 Populus trichocarpa HOM05D007449 ORTHO05D009504 9.8e-67 257.3 168 75.0
CANSAT56G2387 Cannabis sativa HOM05D007449 ORTHO05D009504 2.9e-66 255.8 152 82.9
MD05G1240900 Malus domestica HOM05D007449 ORTHO05D009504 6.4e-66 254.6 167 76.0
CDE02G1458 Ceratophyllum demersum HOM05D001125 ORTHO05D003189 8.3e-66 254.2 154 79.2
Aqoxy5G02136 Aquilegia oxysepala HOM05D007449 ORTHO05D009504 1.1e-65 253.8 168 75.0
COL.COLO4_32270 Corchorus olitorius HOM05D007449 ORTHO05D009504 1.4e-65 253.4 155 78.7
CSS0049228 Camellia sinensis var. sinensis HOM05D007449 ORTHO05D009504 2.4e-65 252.7 168 75.0
Glyma.08G160000 Glycine max HOM05D007449 ORTHO05D009504 2.4e-65 252.7 169 76.9
Glyma.15G266900 Glycine max HOM05D007449 ORTHO05D009504 2.4e-65 252.7 163 79.1
Lsat_1_v5_gn_7_111001 Lactuca sativa HOM05D007449 ORTHO05D009504 5.4e-65 251.5 153 80.4
THA.LOC104812400 Tarenaya hassleriana HOM05D007449 ORTHO05D009504 5.4e-65 251.5 155 77.4
Ciclev10006094m.g Citrus clementina HOM05D007449 ORTHO05D009504 1.2e-64 250.4 154 79.9
ECA236G3627 Erigeron canadensis HOM05D007449 ORTHO05D009504 2.7e-64 249.2 168 74.4
HanXRQChr11g0335831 Helianthus annuus HOM05D007449 ORTHO05D009504 2.7e-64 249.2 153 79.7
Atru.chr1.9 Acer truncatum HOM05D007449 ORTHO05D009504 4.6e-64 248.4 152 78.3
MBI02_g42634_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 7.8e-64 247.7 153 79.1
SEGI_20644 Sequoiadendron giganteum HOM05D007449 ORTHO05D009504 1.0e-63 247.3 152 76.3
Duzib213G0878 Durio zibethinus HOM05D007449 ORTHO05D009504 2.3e-63 246.1 154 77.3
HPP92_008185 Vanilla planifolia HOM05D007449 ORTHO05D009504 2.3e-63 246.1 167 73.7
HPP92_008133 Vanilla planifolia HOM05D007449 ORTHO05D009504 3.0e-63 245.7 167 73.7
Gohir.A13G127500 Gossypium hirsutum HOM05D007449 ORTHO05D009504 6.6e-63 244.6 154 75.3
Lalb_Chr01g0015631 Lupinus albus HOM05D007449 ORTHO05D009504 6.6e-63 244.6 168 73.8
Gohir.D13G131200 Gossypium hirsutum HOM05D007449 ORTHO05D009504 1.9e-62 243.0 154 74.7
arahy.Tifrunner.gnm1.ann1.4RN51I Arachis hypogaea HOM05D007449 ORTHO05D009504 5.6e-62 241.5 156 76.9
arahy.Tifrunner.gnm1.ann1.VWXD6N Arachis hypogaea HOM05D007449 ORTHO05D009504 5.6e-62 241.5 156 76.9
Cfa017774 Carpinus fangiana HOM05D007449 ORTHO05D009504 5.6e-62 241.5 162 73.5
AT1G79260 Arabidopsis thaliana HOM05D007449 ORTHO05D009504 1.2e-61 240.4 193 63.2
Gorai.013G147200 Gossypium raimondii HOM05D007449 ORTHO05D009504 1.2e-61 240.4 154 74.0
CiPaw.15G111100 Carya illinoinensis HOM05D007449 ORTHO05D009504 1.6e-61 240.0 163 72.4
Medtr1g046590 Medicago truncatula HOM05D007449 ORTHO05D009504 4.7e-61 238.4 162 73.5
Os01g0679600 Oryza sativa ssp. japonica HOM05D007449 ORTHO05D009504 4.7e-61 238.4 161 74.5
TWI38G0722 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 4.7e-61 238.4 164 72.6
TWI38G2117 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 4.7e-61 238.4 164 72.6
Migut.H01650 Erythranthe guttata HOM05D007449 ORTHO05D009504 8.0e-61 237.7 166 72.3
Thhalv10019230m.g Eutrema salsugineum HOM05D007449 ORTHO05D009504 8.0e-61 237.7 160 74.4
Manes.16G050159 Manihot esculenta HOM05D007449 ORTHO05D009504 8.0e-61 237.7 168 71.4
Psat6g047080 Pisum sativum HOM05D007449 ORTHO05D009504 8.0e-61 237.7 162 73.5
Zm00001eb156770 Zea mays HOM05D007449 ORTHO05D009504 8.0e-61 237.7 162 73.5
TAR629G0115 Trochodendron aralioides HOM05D007449 ORTHO05D009504 1.8e-60 236.5 187 64.7
Rhsim10G0133000 Rhododendron simsii HOM05D007449 ORTHO05D009504 2.3e-60 236.1 209 62.7
Nitab4.5_0006598g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 8.9e-60 234.2 154 76.0
Carub.0002s2613 Capsella rubella HOM05D007449 ORTHO05D009504 1.2e-59 233.8 154 74.7
AL2G39860 Arabidopsis lyrata HOM05D007449 ORTHO05D009504 5.8e-59 231.5 166 69.9
MSTRG.13092 Avicennia marina HOM05D007449 ORTHO05D009504 5.8e-59 231.5 158 72.8
CAN.G222.124 Capsicum annuum HOM05D007449 ORTHO05D009504 5.8e-59 231.5 153 75.8
Solyc11g011610.2 Solanum lycopersicum HOM05D007449 ORTHO05D009504 5.8e-59 231.5 153 75.2
BcaB05g25191 Brassica carinata HOM05D007449 ORTHO05D009504 1.3e-58 230.3 158 71.5
Sopen11g006460 Solanum pennellii HOM05D007449 ORTHO05D009504 1.3e-58 230.3 153 75.2
PGSC0003DMG400013314 Solanum tuberosum HOM05D007449 ORTHO05D009504 1.3e-58 230.3 153 74.5
C02p36470 Brassica napus HOM05D007449 ORTHO05D009504 1.7e-58 229.9 158 70.3
TPR.G11303 Trifolium pratense HOM05D007449 ORTHO05D009504 1.7e-58 229.9 164 71.3
vmacro12790 Vaccinium macrocarpon HOM05D007449 ORTHO05D009504 1.7e-58 229.9 231 56.7
BcaC03g15880 Brassica carinata HOM05D007449 ORTHO05D009504 2.2e-58 229.6 158 70.3
Nitab4.5_0005124g0020 Nicotiana tabacum HOM05D007449 ORTHO05D009504 2.9e-58 229.2 153 75.2
Sp5g34340 Schrenkiella parvula HOM05D007449 ORTHO05D009504 2.9e-58 229.2 154 72.7
BraA02t07273Z Brassica rapa HOM05D007449 ORTHO05D009504 4.9e-58 228.4 158 69.6
ATR0109G018 Amborella trichopoda HOM05D007449 ORTHO05D009504 6.4e-58 228.0 154 72.7
BolC2t09646H Brassica oleracea HOM05D007449 ORTHO05D009504 6.4e-58 228.0 158 69.6
Oeu002792.1 Olea europaea HOM05D007449 ORTHO05D009775 8.3e-58 227.6 158 70.3
SGA_v2.0_scaffold49G18211 Striga asiatica HOM05D007449 ORTHO05D009504 8.3e-58 227.6 159 71.7
Cc08_g13080 Coffea canephora HOM05D007449 ORTHO05D009504 1.1e-57 227.3 160 73.1
Peaxi162Scf00124g01733 Petunia axillaris HOM05D007449 ORTHO05D009504 1.1e-57 227.3 153 72.5
Solyc11g011620.3 Solanum lycopersicum HOM05D007449 ORTHO05D009504 2.4e-57 226.1 151 73.5
A02p22730 Brassica napus HOM05D007449 ORTHO05D009504 4.1e-57 225.3 158 69.0
AagrBONN_evm.TU.Sc2ySwM_362.2319 Anthoceros agrestis HOM05D007449 ORTHO05D009504 7.1e-57 224.6 151 69.5
Aa31LG4G1730 Aethionema arabicum HOM05D007449 ORTHO05D009504 1.6e-56 223.4 172 65.7
Nitab4.5_0001438g0030 Nicotiana tabacum HOM05D007449 ORTHO05D009504 2.1e-56 223.0 153 72.5
Actinidia33338 Actinidia chinensis HOM05D007449 ORTHO05D009504 1.7e-55 219.9 133 82.7
PGR031G0327 Punica granatum HOM05D007449 ORTHO05D009504 4.3e-54 215.3 170 67.1
Phvul.005G043600 Phaseolus vulgaris HOM05D007449 ORTHO05D009504 3.6e-53 212.2 165 68.5
SMO364G0724 Selaginella moellendorffii HOM05D007449 ORTHO05D009504 8.1e-53 211.1 156 66.7
Eucgr.F04482 Eucalyptus grandis HOM05D007449 ORTHO05D009504 5.8e-51 204.9 151 68.2
arahy.Tifrunner.gnm1.ann1.FIRH26 Arachis hypogaea HOM05D007449 ORTHO05D009504 2.4e-49 199.5 121 79.3
QL04p096242 Quercus lobata HOM05D007449 ORTHO05D009504 1.2e-48 197.2 115 80.9
QL04p096050 Quercus lobata HOM05D007449 ORTHO05D009504 3.5e-48 195.7 114 80.7
Mapoly0054s0111 Marchantia polymorpha HOM05D007449 ORTHO05D009504 1.0e-47 194.1 166 58.4
Haze_18462 Corylus avellana HOM05D007449 ORTHO05D009504 3.0e-47 192.6 114 79.8
Nitab4.5_0009898g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 3.3e-46 189.1 152 65.8
Pp3c6_12570 Physcomitrium patens HOM05D007449 ORTHO05D009504 1.6e-45 186.8 116 73.3
FAN25G3406 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.4e-41 173.7 108 82.4
MBI02_g17887_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 6.6e-39 164.9 153 58.8
Ca_03327_v3 Cicer arietinum L. HOM05D007449 ORTHO05D009504 4.3e-38 162.2 110 74.5
Lj2A6T27 Lonicera japonica HOM05D007449 ORTHO05D009504 1.8e-36 156.8 90 80.0
DCAR_013701 Daucus carota HOM05D007449 ORTHO05D009504 2.4e-36 156.4 92 80.4
Aa31LG4G1740 Aethionema arabicum HOM05D007449 ORTHO05D009504 3.8e-26 122.5 168 42.9
Nitab4.5_0001650g0100 Nicotiana tabacum HOM05D000057 ORTHO05D000021 1.4e-25 120.6 121 55.4
Nitab4.5_0007284g0070 Nicotiana tabacum HOM05D000057 ORTHO05D000021 1.0e-18 97.8 98 55.1
TPR.G35695 Trifolium pratense HOM05D000290 ORTHO05D044376 3.9e-15 85.9 111 50.5
MBI02_g30541_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 1.6e-13 80.5 81 61.7
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 1.4e-12 77.4 53 67.9
Glyma.14G034600 Glycine max HOM05D007449 ORTHO05D009504 2.2e-10 70.1 49 63.3


User provided reference genes

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