Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C019561.2 Cucumis melo HOM05D007341 ORTHO05D009075 2.3e-80 302.4 172 100.0
CsaV3_3G018050 Cucumis sativus L. HOM05D007341 ORTHO05D009075 5.1e-72 274.6 172 92.4
Sed0003722 Sechium edule HOM05D007341 ORTHO05D009075 9.6e-63 243.8 173 85.0
ClCG05G010440 Citrullus lanatus HOM05D007341 ORTHO05D009075 7.6e-60 234.2 156 92.3
QL05p085130 Quercus lobata HOM05D007341 ORTHO05D009075 6.7e-48 194.5 100 89.0
Haze_16246 Corylus avellana HOM05D007341 ORTHO05D009075 1.1e-47 193.7 101 88.1
Prupe.3G028000 Prunus persica HOM05D007341 ORTHO05D009075 1.5e-47 193.4 101 89.1
CiPaw.01G092200 Carya illinoinensis HOM05D007341 ORTHO05D009075 1.9e-47 193.0 101 88.1
Cfa002160 Carpinus fangiana HOM05D007341 ORTHO05D009075 7.4e-47 191.0 103 85.4
GSVIVG01029444001 Vitis vinifera HOM05D007341 ORTHO05D009075 1.6e-46 189.9 98 90.8
MD09G1169800 Malus domestica HOM05D007341 ORTHO05D009075 2.1e-46 189.5 101 87.1
TWI12G0959 Tripterygium wilfordii HOM05D007341 ORTHO05D009075 2.8e-46 189.1 101 87.1
RcHm_v2.0_Chr2g0148351 Rosa chinensis HOM05D007341 ORTHO05D009075 1.1e-45 187.2 101 85.1
Sabra07G0002700 Salix brachista HOM05D007341 ORTHO05D009075 1.8e-45 186.4 104 86.5
Ciclev10029418m.g Citrus clementina HOM05D007341 ORTHO05D009075 2.4e-45 186.0 103 81.6
FvH4_6g36350 Fragaria vesca HOM05D007341 ORTHO05D009075 2.4e-45 186.0 101 84.2
FAN02G2832 Fragaria x ananassa HOM05D007341 ORTHO05D009075 2.4e-45 186.0 101 84.2
FAN09G2851 Fragaria x ananassa HOM05D007341 ORTHO05D009075 9.0e-45 184.1 101 83.2
Duzib235G0177 Durio zibethinus HOM05D007341 ORTHO05D009075 1.2e-44 183.7 101 84.2
Gohir.A05G116700 Gossypium hirsutum HOM05D007341 ORTHO05D009075 2.0e-44 183.0 102 82.4
Gorai.009G121500 Gossypium raimondii HOM05D007341 ORTHO05D009075 2.0e-44 183.0 102 82.4
Eucgr.F04060 Eucalyptus grandis HOM05D007341 ORTHO05D009075 3.4e-44 182.2 103 83.5
Gohir.D05G117600 Gossypium hirsutum HOM05D007341 ORTHO05D009075 3.4e-44 182.2 102 81.4
Dinv20313 Davidia involucrata HOM05D007341 ORTHO05D009075 5.8e-44 181.4 103 81.6
Potri.007G003600 Populus trichocarpa HOM05D007341 ORTHO05D009075 5.8e-44 181.4 100 88.0
CSS0015626 Camellia sinensis var. sinensis HOM05D007341 ORTHO05D009075 7.6e-44 181.0 102 83.3
Cc06_g16890 Coffea canephora HOM05D007341 ORTHO05D009075 2.2e-43 179.5 104 80.8
PGR102G3137 Punica granatum HOM05D007341 ORTHO05D009075 6.4e-43 177.9 101 82.2
Thecc.06G049400 Theobroma cacao HOM05D007341 ORTHO05D009075 6.4e-43 177.9 102 81.4
Hma1.2p1_0422F.1_g150100 Hydrangea macrophylla HOM05D007341 ORTHO05D009075 1.1e-42 177.2 98 83.7
CANSAT01G1666 Cannabis sativa HOM05D007341 ORTHO05D009075 1.9e-42 176.4 102 77.5
HanXRQChr03g0072101 Helianthus annuus HOM05D007341 ORTHO05D009075 3.2e-42 175.6 100 82.0
Nitab4.5_0000349g0220 Nicotiana tabacum HOM05D007341 ORTHO05D009075 4.2e-42 175.3 104 76.9
Lsat_1_v5_gn_9_114620 Lactuca sativa HOM05D007341 ORTHO05D009075 9.3e-42 174.1 100 81.0
TAR636G1203 Trochodendron aralioides HOM05D007341 ORTHO05D009075 2.1e-41 172.9 101 81.2
ECA240G2002 Erigeron canadensis HOM05D007341 ORTHO05D009075 2.7e-41 172.6 100 80.0
DCAR_027600 Daucus carota HOM05D007341 ORTHO05D009075 3.5e-41 172.2 101 76.2
Glyma.15G000400 Glycine max HOM05D007341 ORTHO05D009075 4.6e-41 171.8 92 84.8
PGSC0003DMG400019203 Solanum tuberosum HOM05D007341 ORTHO05D009075 7.9e-41 171.0 103 75.7
THA.LOC104808109 Tarenaya hassleriana HOM05D007341 ORTHO05D009075 7.9e-41 171.0 98 80.6
Solyc10g086470.2 Solanum lycopersicum HOM05D007341 ORTHO05D009075 1.0e-40 170.6 103 74.8
Sopen10g035850 Solanum pennellii HOM05D007341 ORTHO05D009075 1.0e-40 170.6 103 74.8
Phvul.005G082000 Phaseolus vulgaris HOM05D007341 ORTHO05D009075 1.1e-39 167.2 92 81.5
MSTRG.26115 Avicennia marina HOM05D007341 ORTHO05D009075 9.6e-39 164.1 105 76.2
Medtr6g004140 Medicago truncatula HOM05D007341 ORTHO05D009075 9.6e-39 164.1 98 78.6
unitig_748.g7237 Utricularia gibba HOM05D007341 ORTHO05D009075 1.1e-37 160.6 101 76.2
Aqoxy7G02561 Aquilegia oxysepala HOM05D007341 ORTHO05D009075 1.8e-37 159.8 99 75.8
Migut.K00075 Erythranthe guttata HOM05D007341 ORTHO05D009075 4.0e-37 158.7 104 73.1
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 4.0e-37 158.7 97 79.4
BcaC08g45393 Brassica carinata HOM05D007341 ORTHO05D009075 5.3e-37 158.3 98 77.6
A07p27380 Brassica napus HOM05D007341 ORTHO05D009075 5.3e-37 158.3 98 77.6
C06p30240 Brassica napus HOM05D007341 ORTHO05D009075 5.3e-37 158.3 98 77.6
BolC6t38187H Brassica oleracea HOM05D007341 ORTHO05D009075 5.3e-37 158.3 98 77.6
BraA07t30379Z Brassica rapa HOM05D007341 ORTHO05D009075 5.3e-37 158.3 98 77.6
Lalb_Chr24g0392671 Lupinus albus HOM05D007341 ORTHO05D009075 6.9e-37 157.9 101 73.3
AUR62001305 Chenopodium quinoa HOM05D007341 ORTHO05D009075 9.0e-37 157.5 106 72.6
CARHR072660 Cardamine hirsuta HOM05D007341 ORTHO05D009075 1.2e-36 157.1 98 76.5
AUR62025687 Chenopodium quinoa HOM05D007341 ORTHO05D009075 1.2e-36 157.1 106 71.7
BcaB02g07190 Brassica carinata HOM05D007341 ORTHO05D009075 2.6e-36 156.0 98 76.5
Thhalv10019269m.g Eutrema salsugineum HOM05D007341 ORTHO05D009075 2.6e-36 156.0 98 76.5
AL2G39450 Arabidopsis lyrata HOM05D007341 ORTHO05D009075 3.4e-36 155.6 98 76.5
AT1G78995 Arabidopsis thaliana HOM05D007341 ORTHO05D009075 4.5e-36 155.2 98 75.5
Carub.0002s2586 Capsella rubella HOM05D007341 ORTHO05D009075 4.5e-36 155.2 98 75.5
CDE05G1356 Ceratophyllum demersum HOM05D007341 ORTHO05D009075 4.5e-36 155.2 98 76.5
Sp5g34040 Schrenkiella parvula HOM05D007341 ORTHO05D009075 5.8e-36 154.8 98 75.5
EL10Ac7g18105 Beta vulgaris HOM05D007341 ORTHO05D009075 3.8e-35 152.1 105 69.5
Actinidia38822 Actinidia chinensis HOM05D007341 ORTHO05D009075 4.9e-35 151.8 110 72.7
Mapoly0061s0126 Marchantia polymorpha HOM05D007341 ORTHO05D009075 3.2e-34 149.1 94 73.4
Pp3c15_22740 Physcomitrium patens HOM05D007341 ORTHO05D009075 4.2e-34 148.7 94 73.4
HPP92_026441 Vanilla planifolia HOM05D007341 ORTHO05D009075 1.2e-33 147.1 94 73.4
Hund18551 Selenicereus undatus HOM05D007341 ORTHO05D009075 6.0e-33 144.8 96 74.0
SGA_v2.0_scaffold94G28462 Striga asiatica HOM05D007341 ORTHO05D009075 1.8e-32 143.3 104 69.2
Zm00001eb227230 Zea mays HOM05D007341 ORTHO05D009075 1.8e-32 143.3 103 65.0
ATR0626G096 Amborella trichopoda HOM05D007341 ORTHO05D009075 2.3e-32 142.9 102 69.6
Cpa.g.sc4293.1 Carica papaya HOM05D007341 ORTHO05D009075 5.1e-32 141.7 74 86.5
FAN14G2925 Fragaria x ananassa HOM05D007341 ORTHO05D009075 1.1e-31 140.6 101 68.3
FAN14G4935 Fragaria x ananassa HOM05D007341 ORTHO05D009075 1.1e-31 140.6 101 68.3
VMungo1080G1509 Vigna mungo HOM05D007341 ORTHO05D009075 2.5e-31 139.4 78 80.8
Nn8g41280 Nelumbo nucifera HOM05D007341 ORTHO05D009075 5.7e-31 138.3 167 49.7
PSO063G2737 Papaver somniferum HOM05D007341 ORTHO05D009075 3.7e-30 135.6 93 69.9
PSO170G4447 Papaver somniferum HOM05D007341 ORTHO05D009075 6.3e-30 134.8 93 69.9
DCAR_011722 Daucus carota HOM05D007341 ORTHO05D009075 1.1e-29 134.0 99 60.6
SMO232G0085 Selaginella moellendorffii HOM05D007341 ORTHO05D009075 1.8e-29 133.3 97 66.0
Nitab4.5_0001911g0010 Nicotiana tabacum HOM05D007341 ORTHO05D009075 1.2e-28 130.6 104 62.5
Sc16g0003760 Simmondsia chinensis HOM05D007341 ORTHO05D009075 1.1e-26 124.0 82 75.6
Os06g0704200 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 5.5e-26 121.7 101 60.4
Sabra14G0002900 Salix brachista HOM05D007341 ORTHO05D009075 2.7e-25 119.4 89 67.4
C02p36120 Brassica napus HOM05D007341 ORTHO05D009075 9.7e-23 110.9 66 77.3
Manes.06G177800 Manihot esculenta HOM05D007341 ORTHO05D009075 5.3e-21 105.1 70 68.6
Peaxi162Scf00330g00029 Petunia axillaris HOM05D007341 ORTHO05D009075 5.3e-21 105.1 115 53.9
vmacro18722 Vaccinium macrocarpon HOM05D007341 ORTHO05D009075 6.9e-21 104.8 99 59.6
Rhsim08G0252300 Rhododendron simsii HOM05D000912 ORTHO05D009075 2.0e-20 103.2 73 75.3
Cre01.g000800 Chlamydomonas reinhardtii HOM05D007341 ORTHO05D009075 5.9e-20 101.7 99 46.5
Oeu004021.1 Olea europaea HOM05D007341 ORTHO05D009075 1.7e-19 100.1 70 71.4
Aa31LG4G1990 Aethionema arabicum HOM05D007341 ORTHO05D009075 1.1e-18 97.4 64 73.4
Psat6g000680 Pisum sativum HOM05D007341 ORTHO05D009075 3.2e-18 95.9 64 73.4
Lj9A544T49 Lonicera japonica HOM05D007341 ORTHO05D009075 3.6e-17 92.4 66 74.2
Os02g0138100 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 4.7e-17 92.0 83 56.6
MCO04G269 Micromonas commoda HOM05D007341 ORTHO05D009075 7.9e-17 91.3 89 44.9
SalBow1G8719 Salvia bowleyana HOM05D007341 ORTHO05D009075 2.3e-16 89.7 94 52.1
SalBow1G7986 Salvia bowleyana HOM05D007341 ORTHO05D009075 2.0e-15 86.7 71 60.6
AagrBONN_evm.TU.Sc2ySwM_368.1307 Anthoceros agrestis HOM05D007341 ORTHO05D009075 6.3e-14 81.6 62 66.1
MBI13_g34919_MAGBIO Magnolia biondii HOM05D007341 ORTHO05D009075 6.3e-14 81.6 60 71.7
Ah.08g218010 Amaranthus hybridus HOM05D007341 ORTHO05D009075 1.1e-13 80.9 109 45.9
PRCOL_00000561 Prasinoderma coloniale HOM05D007341 ORTHO05D009075 5.9e-12 75.1 87 42.5
Zm00001eb231900 Zea mays HOM05D007341 ORTHO05D009075 1.0e-08 64.3 77 45.5


User provided reference genes

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