Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C019169.2 Cucumis melo HOM05D007667 ORTHO05D008033 7.4e-81 303.9 163 100.0
CsaV3_4G028970 Cucumis sativus L. HOM05D007667 ORTHO05D008033 5.1e-74 281.2 156 95.5
ClCG04G005020 Citrullus lanatus HOM05D007667 ORTHO05D008033 3.5e-46 188.7 161 75.8
Sed0012185 Sechium edule HOM05D007667 ORTHO05D008033 2.1e-35 152.9 157 58.6
ClCG10G016970 Citrullus lanatus HOM05D007667 ORTHO05D008033 6.6e-13 78.2 125 44.0
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 6.6e-13 78.2 172 32.6
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 4.3e-12 75.5 76 52.6
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 5.6e-12 75.1 162 33.3
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 9.5e-12 74.3 83 43.4
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 2.1e-11 73.2 76 48.7
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 3.6e-11 72.4 83 47.0
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 4.7e-11 72.0 162 33.3
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 8.0e-11 71.2 77 48.1
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 1.1e-10 70.9 74 44.6
CsaV3_3G039420 Cucumis sativus L. HOM05D007667 ORTHO05D008033 1.4e-10 70.5 71 52.1
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 1.8e-10 70.1 76 46.1
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 1.8e-10 70.1 76 46.1
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 1.8e-10 70.1 162 33.3
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 3.1e-10 69.3 76 46.1
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 3.1e-10 69.3 76 46.1
Sed0023543 Sechium edule HOM05D007667 ORTHO05D008033 4.0e-10 68.9 80 51.2
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 5.2e-10 68.6 76 46.1
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 6.8e-10 68.2 76 48.7
MELO3C030720.2 Cucumis melo HOM05D007667 ORTHO05D008033 6.8e-10 68.2 124 39.5
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 6.8e-10 68.2 79 45.6
Cc06_g20370 Coffea canephora HOM05D007667 ORTHO05D008033 8.9e-10 67.8 163 32.5
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 1.2e-09 67.4 170 31.8
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 1.2e-09 67.4 83 48.2
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 2.0e-09 66.6 170 31.8
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 2.6e-09 66.2 76 46.1
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 3.4e-09 65.9 76 42.1
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 5.8e-09 65.1 77 46.8
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 5.8e-09 65.1 75 44.0
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 7.5e-09 64.7 166 29.5
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 7.5e-09 64.7 82 40.2
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 9.8e-09 64.3 76 46.1
RhsimUnG0021200 Rhododendron simsii HOM05D007667 ORTHO05D008033 9.8e-09 64.3 77 40.3
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 1.3e-08 63.9 76 46.1
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 1.3e-08 63.9 76 44.7
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 1.7e-08 63.5 74 44.6
DCAR_020622 Daucus carota HOM05D007667 ORTHO05D008033 2.2e-08 63.2 79 46.8
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 2.9e-08 62.8 148 29.1
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 3.7e-08 62.4 161 29.8
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 4.9e-08 62.0 168 29.2
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 1.4e-07 60.5 76 38.2
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 1.9e-07 60.1 82 40.2
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 4.1e-07 58.9 83 37.3
Solyc08g067000.3 Solanum lycopersicum HOM05D007667 ORTHO05D008033 1.6e-06 57.0 74 47.3
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 2.1e-06 56.6 76 36.8
Oeu060747.1 Olea europaea HOM05D007667 ORTHO05D008033 3.5e-06 55.8 76 38.2
Actinidia37860 Actinidia chinensis HOM05D007667 ORTHO05D008033 4.6e-06 55.5 79 39.2
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 6.0e-06 55.1 81 37.0
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 7.8e-06 54.7 76 36.8


User provided reference genes

Program Settings