Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 6.8e-47 190.7 122 100.0
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 1.4e-44 183.0 122 80.3
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 1.2e-43 179.9 122 95.1
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 7.6e-38 160.6 122 89.3
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 2.4e-28 129.0 121 59.5
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 2.4e-28 129.0 121 59.5
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 2.4e-28 129.0 118 59.3
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 1.2e-27 126.7 116 74.1
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 1.2e-27 126.7 121 57.0
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 2.1e-27 125.9 114 57.0
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 2.1e-27 125.9 121 56.2
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 2.1e-27 125.9 121 56.2
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 2.7e-27 125.6 121 56.2
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 2.7e-27 125.6 121 56.2
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 3.5e-27 125.2 120 54.2
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 3.5e-27 125.2 121 57.9
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 6.0e-27 124.4 89 69.7
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 7.8e-27 124.0 114 56.1
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 1.0e-26 123.6 121 55.4
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 1.3e-26 123.2 87 67.8
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 1.3e-26 123.2 120 55.8
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.7e-26 122.9 119 69.7
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 1.7e-26 122.9 119 55.5
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 1.7e-26 122.9 119 58.8
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 2.3e-26 122.5 89 67.4
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 3.0e-26 122.1 121 57.0
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 3.9e-26 121.7 110 56.4
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 3.9e-26 121.7 109 57.8
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 5.1e-26 121.3 121 55.4
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 8.7e-26 120.6 121 57.0
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 8.7e-26 120.6 111 56.8
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 8.7e-26 120.6 121 54.5
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 1.1e-25 120.2 89 68.5
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 1.9e-25 119.4 121 52.9
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 2.5e-25 119.0 114 56.1
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 2.5e-25 119.0 89 68.5
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 2.5e-25 119.0 120 55.0
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 2.5e-25 119.0 111 57.7
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 2.5e-25 119.0 121 52.1
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 3.3e-25 118.6 110 56.4
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 3.3e-25 118.6 119 54.6
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 3.3e-25 118.6 121 54.5
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 3.3e-25 118.6 121 54.5
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 3.3e-25 118.6 110 57.3
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 4.3e-25 118.2 118 55.1
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 4.3e-25 118.2 110 56.4
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 5.6e-25 117.9 107 56.1
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 7.3e-25 117.5 89 67.4
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 1.3e-24 116.7 121 52.1
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 1.3e-24 116.7 111 55.9
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 1.3e-24 116.7 118 54.2
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 1.6e-24 116.3 108 55.6
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 1.6e-24 116.3 110 55.5
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 1.6e-24 116.3 119 52.1
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 1.6e-24 116.3 114 55.3
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 3.6e-24 115.2 111 72.1
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 3.6e-24 115.2 89 65.2
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 4.8e-24 114.8 119 70.6
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 4.8e-24 114.8 79 70.9
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 4.8e-24 114.8 116 52.6
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 4.8e-24 114.8 85 65.9
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 6.2e-24 114.4 88 64.8
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 8.1e-24 114.0 110 54.5
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 1.1e-23 113.6 79 68.4
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 1.8e-23 112.8 114 67.5
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 2.4e-23 112.5 78 67.9
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.1e-23 112.1 89 64.0
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.0e-23 111.7 121 52.9
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.0e-23 111.7 121 52.9
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 6.9e-23 110.9 116 69.0
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 6.9e-23 110.9 111 53.2
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 9.0e-23 110.5 111 53.2
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 9.0e-23 110.5 120 50.8
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 1.5e-22 109.8 111 52.3
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 2.0e-22 109.4 115 51.3
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 2.6e-22 109.0 76 72.4
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 2.6e-22 109.0 80 66.2
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 2.6e-22 109.0 111 52.3
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 5.8e-22 107.8 80 70.0
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 5.8e-22 107.8 109 52.3
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 1.3e-21 106.7 85 62.4
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 1.7e-21 106.3 124 49.2
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 1.7e-21 106.3 80 68.8
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 1.7e-21 106.3 111 52.3
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.2e-21 105.9 89 64.0
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 2.2e-21 105.9 105 72.4
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 2.9e-21 105.5 79 64.6
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 4.9e-21 104.8 121 47.9
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 1.1e-20 103.6 92 59.8
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 2.4e-20 102.4 108 67.6
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 2.4e-20 102.4 108 67.6
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 2.4e-20 102.4 74 67.6
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 3.2e-20 102.1 92 58.7
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 3.2e-20 102.1 74 66.2
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 5.4e-20 101.3 78 61.5
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 5.4e-20 101.3 78 61.5
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 5.4e-20 101.3 105 52.4
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 5.4e-20 101.3 84 56.0
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 7.1e-20 100.9 89 59.6
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 9.3e-20 100.5 78 60.3
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 1.2e-19 100.1 79 62.0
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 2.1e-19 99.4 73 64.4
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 2.1e-19 99.4 73 64.4
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 2.7e-19 99.0 71 66.2
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 3.5e-19 98.6 73 64.4
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 4.6e-19 98.2 108 64.8
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 4.6e-19 98.2 75 68.0
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 6.0e-19 97.8 71 66.2
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 6.0e-19 97.8 71 66.2
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 3.9e-18 95.1 59 76.3
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.9e-18 95.1 59 76.3
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 1.5e-17 93.2 88 50.0
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 4.3e-17 91.7 66 63.6
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 2.8e-16 89.0 89 75.3
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 2.8e-16 89.0 85 54.1
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 6.9e-15 84.3 80 61.2
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 5.8e-14 81.3 76 55.3
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 2.2e-13 79.3 82 46.3
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 2.4e-12 75.9 76 53.9
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 2.4e-12 75.9 78 46.2
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 4.2e-12 75.1 76 53.9
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 1.2e-11 73.6 81 43.2
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.6e-11 73.2 76 51.3
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.6e-11 73.2 76 51.3
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 8.7e-10 67.4 81 39.5
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 1.9e-09 66.2 43 74.4
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 7.4e-09 64.3 44 65.9


User provided reference genes

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