Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C018738.2 Cucumis melo HOM05D005953 ORTHO05D004056 8.0e-36 153.3 81 100.0
CsaV3_7G004410 Cucumis sativus L. HOM05D005953 ORTHO05D004056 2.5e-29 131.7 81 88.9
ClCG07G002930 Citrullus lanatus HOM05D005953 ORTHO05D004056 4.0e-27 124.4 81 85.2
Sed0010329 Sechium edule HOM05D005953 ORTHO05D004056 6.4e-17 90.5 81 67.9
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 4.3e-13 77.8 83 60.2
Sed0015284 Sechium edule HOM05D005953 ORTHO05D004056 3.6e-12 74.7 81 65.4
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 6.2e-12 73.9 83 57.8
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 6.2e-12 73.9 82 56.1
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 1.1e-11 73.2 81 53.1
Oeu045817.1 Olea europaea HOM05D005953 ORTHO05D004056 1.1e-11 73.2 81 54.3
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 6.8e-11 70.5 83 60.2
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 1.2e-10 69.7 84 53.6
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 4.4e-10 67.8 81 54.3
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 1.3e-09 66.2 86 53.5
MBI07_g12792_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 2.2e-09 65.5 85 50.6
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 2.9e-09 65.1 83 55.4
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 2.9e-09 65.1 83 55.4
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 2.9e-09 65.1 81 50.6
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 2.9e-09 65.1 82 54.9
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 3.7e-09 64.7 80 52.5
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 3.7e-09 64.7 80 52.5
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 4.9e-09 64.3 81 49.4
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 4.9e-09 64.3 84 52.4
Lalb_Chr14g0366901 Lupinus albus HOM05D005953 ORTHO05D004056 4.9e-09 64.3 81 53.1
CDE08G1618 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 6.4e-09 63.9 81 51.9
Sed0013976 Sechium edule HOM05D005953 ORTHO05D004056 6.4e-09 63.9 84 54.8
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 1.1e-08 63.2 83 54.2
PGR042G2028 Punica granatum HOM05D005953 ORTHO05D004056 1.9e-08 62.4 90 48.9
PGSC0003DMG400018306 Solanum tuberosum HOM05D005953 ORTHO05D004056 1.9e-08 62.4 81 50.6
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 3.2e-08 61.6 82 51.2
Lsat_1_v5_gn_8_134201 Lactuca sativa HOM05D005953 ORTHO05D004056 3.2e-08 61.6 81 49.4
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 3.2e-08 61.6 81 53.1
Carub.0007s1247 Capsella rubella HOM05D005953 ORTHO05D004056 4.1e-08 61.2 83 49.4
ECA246G2973 Erigeron canadensis HOM05D005953 ORTHO05D004056 4.1e-08 61.2 81 48.1
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 4.1e-08 61.2 82 51.2
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 7.1e-08 60.5 82 51.2
Nitab4.5_0002253g0010 Nicotiana tabacum HOM05D005953 ORTHO05D004056 7.1e-08 60.5 80 48.8
Peaxi162Scf00132g00229 Petunia axillaris HOM05D005953 ORTHO05D004056 7.1e-08 60.5 81 46.9
Potri.019G100601 Populus trichocarpa HOM05D005953 ORTHO05D004056 9.2e-08 60.1 81 50.6
Sabra13G0111400 Salix brachista HOM05D005953 ORTHO05D004056 1.2e-07 59.7 79 50.6
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 1.2e-07 59.7 81 48.1
Solyc07g054060.3 Solanum lycopersicum HOM05D005953 ORTHO05D004056 1.6e-07 59.3 81 48.1
Glyma.12G112600 Glycine max HOM05D005953 ORTHO05D004056 2.1e-07 58.9 84 48.8
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 2.7e-07 58.5 81 48.1
Oeu002560.3 Olea europaea HOM05D005953 ORTHO05D004056 2.7e-07 58.5 81 44.4
Nitab4.5_0002575g0070 Nicotiana tabacum HOM05D005953 ORTHO05D004056 3.5e-07 58.2 80 46.2
Psat0s741g0120 Pisum sativum HOM05D005953 ORTHO05D004056 3.5e-07 58.2 81 49.4
AT4G28290 Arabidopsis thaliana HOM05D005953 ORTHO05D004056 4.6e-07 57.8 84 50.0
Lalb_Chr03g0029431 Lupinus albus HOM05D005953 ORTHO05D004056 6.0e-07 57.4 81 48.1
Phvul.011G114200 Phaseolus vulgaris HOM05D005953 ORTHO05D004056 6.0e-07 57.4 81 48.1
Lj3g0009023 Lotus japonicus HOM05D005953 ORTHO05D004056 7.8e-07 57.0 81 49.4
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 7.8e-07 57.0 81 44.4
Thecc.03G217700 Theobroma cacao HOM05D008304 ORTHO05D004056 7.8e-07 57.0 81 46.9
Actinidia09855 Actinidia chinensis HOM05D005953 ORTHO05D004056 1.0e-06 56.6 81 49.4
Nitab4.5_0000512g0060 Nicotiana tabacum HOM05D005953 ORTHO05D004056 1.0e-06 56.6 81 44.4
ATR0304G024 Amborella trichopoda HOM05D005953 ORTHO05D004056 1.7e-06 55.8 81 45.7
AL7G24310 Arabidopsis lyrata HOM05D005953 ORTHO05D004056 1.7e-06 55.8 86 47.7
BolC1t02424H Brassica oleracea HOM05D005953 ORTHO05D004056 1.7e-06 55.8 83 47.0
C01p24770 Brassica napus HOM05D005953 ORTHO05D004056 2.3e-06 55.5 83 47.0
CiPaw.04G125700 Carya illinoinensis HOM05D005953 ORTHO05D004056 2.3e-06 55.5 81 44.4
Eucgr.A01816 Eucalyptus grandis HOM05D005953 ORTHO05D004056 3.0e-06 55.1 84 46.4
MD17G1240800 Malus domestica HOM05D005953 ORTHO05D004056 3.0e-06 55.1 86 46.5
ClCG02G017620 Citrullus lanatus HOM05D005953 ORTHO05D004056 3.9e-06 54.7 84 46.4
DCAR_013006 Daucus carota HOM05D005953 ORTHO05D004056 3.9e-06 54.7 92 45.7
Prupe.3G137400 Prunus persica HOM05D005953 ORTHO05D004056 5.1e-06 54.3 82 42.7
arahy.Tifrunner.gnm1.ann1.P9B1J4 Arachis hypogaea HOM05D005953 ORTHO05D004056 6.6e-06 53.9 81 48.1
Aqoxy1G02469 Aquilegia oxysepala HOM05D005953 ORTHO05D004056 8.6e-06 53.5 84 50.0
Oeu042857.1 Olea europaea HOM05D008304 ORTHO05D004056 8.6e-06 53.5 81 45.7
Peaxi162Scf00008g00097 Petunia axillaris HOM05D005953 ORTHO05D004056 8.6e-06 53.5 82 43.9


User provided reference genes

Program Settings