Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C018685.2 Cucumis melo HOM05D008022 ORTHO05D010147 3.0e-68 262.3 197 100.0
CsaV3_7G006070 Cucumis sativus L. HOM05D008022 ORTHO05D010147 4.8e-58 228.4 197 87.8
Sed0002960 Sechium edule HOM05D008022 ORTHO05D010147 1.8e-33 146.7 205 66.8
CSS0048901 Camellia sinensis var. sinensis HOM05D008022 ORTHO05D010147 1.3e-18 97.4 64 60.9
Lj1g0009874 Lotus japonicus HOM05D008022 ORTHO05D010147 8.2e-18 94.7 85 52.9
Lalb_Chr08g0246011 Lupinus albus HOM05D008022 ORTHO05D010147 7.0e-17 91.7 79 53.2
Gohir.A05G188500 Gossypium hirsutum HOM05D008022 ORTHO05D010147 9.1e-17 91.3 68 60.3
Gohir.D05G191600 Gossypium hirsutum HOM05D008022 ORTHO05D010147 9.1e-17 91.3 68 60.3
Gorai.009G196900 Gossypium raimondii HOM05D008022 ORTHO05D010147 9.1e-17 91.3 68 60.3
CiPaw.08G062600 Carya illinoinensis HOM05D008022 ORTHO05D010147 3.5e-16 89.4 78 52.6
Medtr3g113080 Medicago truncatula HOM05D008022 ORTHO05D010147 4.5e-16 89.0 81 53.1
Nitab4.5_0000493g0010 Nicotiana tabacum HOM05D008022 ORTHO05D010147 5.9e-16 88.6 48 72.9
Nn5g29204 Nelumbo nucifera HOM05D008022 ORTHO05D010147 1.0e-15 87.8 83 57.8
Potri.005G234601 Populus trichocarpa HOM05D008022 ORTHO05D010147 1.7e-15 87.0 53 64.2
MD15G1017600 Malus domestica HOM05D008022 ORTHO05D010147 2.2e-15 86.7 53 66.0
Eucgr.F01845 Eucalyptus grandis HOM05D008022 ORTHO05D010147 2.9e-15 86.3 77 53.2
Medtr1g023270 Medicago truncatula HOM05D008022 ORTHO05D010147 2.9e-15 86.3 82 47.6
CANSAT25G1466 Cannabis sativa HOM05D008022 ORTHO05D010147 8.5e-15 84.7 66 59.1
Cfa013902 Carpinus fangiana HOM05D002906 ORTHO05D003211 1.1e-14 84.3 57 61.4
TWI12G0111 Tripterygium wilfordii HOM05D008022 ORTHO05D010147 1.5e-14 84.0 81 48.1
arahy.Tifrunner.gnm1.ann1.RV6KDM Arachis hypogaea HOM05D008022 ORTHO05D010147 1.9e-14 83.6 81 50.6
Atru.chr13.362 Acer truncatum HOM05D008022 ORTHO05D010147 2.5e-14 83.2 81 49.4
Phvul.001G009600 Phaseolus vulgaris HOM05D008022 ORTHO05D010147 3.2e-14 82.8 81 48.1
Glyma.14G216600 Glycine max HOM05D008022 ORTHO05D010147 4.2e-14 82.4 58 58.6
TPR.G40293 Trifolium pratense HOM05D008022 ORTHO05D010147 5.5e-14 82.0 81 45.7
Lalb_Chr22g0354471 Lupinus albus HOM05D008022 ORTHO05D010147 7.2e-14 81.6 79 49.4
Manes.05G152650 Manihot esculenta HOM05D008022 ORTHO05D010147 7.2e-14 81.6 63 60.3
Glyma.17G255200 Glycine max HOM05D008022 ORTHO05D010147 9.4e-14 81.3 56 58.9
Cpa.g.sc140.17 Carica papaya HOM05D008022 ORTHO05D010147 1.2e-13 80.9 44 70.5
CiPaw.07G154400 Carya illinoinensis HOM05D008022 ORTHO05D010147 1.2e-13 80.9 81 53.1
Cc10_g02120 Coffea canephora HOM05D008022 ORTHO05D010147 1.6e-13 80.5 58 56.9
PGR031G0261 Punica granatum HOM05D008022 ORTHO05D010147 1.6e-13 80.5 78 50.0
Psat6g005360 Pisum sativum HOM05D008022 ORTHO05D010147 2.1e-13 80.1 84 46.4
Lj5g0000972 Lotus japonicus HOM05D008022 ORTHO05D010147 3.6e-13 79.3 77 50.6
FvH4_2g39010 Fragaria vesca HOM05D008022 ORTHO05D010147 1.0e-12 77.8 49 61.2
Prupe.1G370900 Prunus persica HOM05D008022 ORTHO05D010147 1.0e-12 77.8 40 75.0
VMungo1309G0619 Vigna mungo HOM05D002906 ORTHO05D003211 1.4e-12 77.4 58 53.4
arahy.Tifrunner.gnm1.ann1.QUSF5W Arachis hypogaea HOM05D008022 ORTHO05D010147 3.0e-12 76.3 48 60.4
Duzib041G0305 Durio zibethinus HOM05D008022 ORTHO05D010147 3.0e-12 76.3 40 77.5
ECA236G3926 Erigeron canadensis HOM05D008022 ORTHO05D010147 3.0e-12 76.3 82 47.6
unitig_8.g4921 Utricularia gibba HOM05D008022 ORTHO05D010147 3.9e-12 75.9 55 67.3
FAN27G1447 Fragaria x ananassa HOM05D008022 ORTHO05D010147 8.8e-12 74.7 38 73.7
EL10Ac1g00558 Beta vulgaris HOM05D008022 ORTHO05D010147 2.0e-11 73.6 49 57.1
Lsat_1_v5_gn_7_91921 Lactuca sativa HOM05D008022 ORTHO05D010147 9.7e-11 71.2 79 44.3
DCAR_017590 Daucus carota HOM05D000043 ORTHO05D000223 1.4e-09 67.4 46 65.2
arahy.Tifrunner.gnm1.ann1.0AGT2R Arachis hypogaea HOM05D008022 ORTHO05D010147 2.4e-09 66.6 45 53.3
PSO541G2481 Papaver somniferum HOM05D008022 ORTHO05D010147 7.0e-09 65.1 45 57.8
HPP92_017807 Vanilla planifolia HOM05D008022 ORTHO05D010147 1.6e-08 63.9 63 44.4
BraA07t31648Z Brassica rapa HOM05D008022 ORTHO05D010147 3.5e-08 62.8 81 40.7
BcaC08g47337 Brassica carinata HOM05D008022 ORTHO05D010147 7.7e-08 61.6 81 40.7
BcaC08g47338 Brassica carinata HOM05D008022 ORTHO05D010147 7.7e-08 61.6 81 40.7
Aqoxy6G02393 Aquilegia oxysepala HOM05D008022 ORTHO05D010147 1.0e-07 61.2 55 49.1
BcaC08g47037 Brassica carinata HOM05D008022 ORTHO05D010147 1.7e-07 60.5 81 39.5
A02p20010 Brassica napus HOM05D008022 ORTHO05D010147 2.2e-07 60.1 40 57.5
C02p34060 Brassica napus HOM05D008022 ORTHO05D010147 2.2e-07 60.1 40 57.5
BolC2t09304H Brassica oleracea HOM05D008022 ORTHO05D010147 2.2e-07 60.1 40 57.5
BraA02t07039Z Brassica rapa HOM05D008022 ORTHO05D010147 2.2e-07 60.1 40 57.5
A07p41120 Brassica napus HOM05D008022 ORTHO05D010147 2.9e-07 59.7 81 39.5
AL2G35530 Arabidopsis lyrata HOM05D008022 ORTHO05D010147 5.0e-07 58.9 40 55.0
BcaB05g24920 Brassica carinata HOM05D008022 ORTHO05D010147 1.5e-06 57.4 40 55.0
CARHR068950 Cardamine hirsuta HOM05D008022 ORTHO05D010147 1.9e-06 57.0 40 55.0
BcaC08g45567 Brassica carinata HOM05D008022 ORTHO05D010147 4.2e-06 55.8 81 40.7
C06p32520 Brassica napus HOM05D008022 ORTHO05D010147 4.2e-06 55.8 81 40.7
BolC6t38374H Brassica oleracea HOM05D008022 ORTHO05D010147 4.2e-06 55.8 81 40.7
C06p49540 Brassica napus HOM05D008022 ORTHO05D010147 5.5e-06 55.5 81 38.3
BolC6t39993H Brassica oleracea HOM05D008022 ORTHO05D010147 5.5e-06 55.5 81 38.3
Carub.0002s2241 Capsella rubella HOM05D008022 ORTHO05D010147 7.2e-06 55.1 60 45.0


User provided reference genes

Program Settings