Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 8.2e-59 230.3 129 100.0
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 6.7e-53 210.7 131 93.9
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 4.8e-43 177.9 139 77.0
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 2.5e-39 165.6 138 76.1
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 1.2e-33 146.7 136 68.4
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 1.6e-33 146.4 137 65.0
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 1.0e-32 143.7 134 65.7
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 8.6e-32 140.6 135 63.0
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 3.2e-31 138.7 141 59.6
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 4.2e-31 138.3 135 63.0
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 5.5e-31 137.9 135 63.7
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 7.2e-31 137.5 135 60.7
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 7.2e-31 137.5 137 61.3
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 7.2e-31 137.5 135 63.7
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 1.2e-30 136.7 136 63.2
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 1.6e-30 136.3 142 60.6
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 2.1e-30 136.0 138 61.6
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 3.6e-30 135.2 151 58.9
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 8.0e-30 134.0 135 59.3
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 8.0e-30 134.0 138 57.2
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 1.4e-29 133.3 153 56.9
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 1.8e-29 132.9 138 60.1
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 4.0e-29 131.7 138 58.7
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 4.0e-29 131.7 138 58.7
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 4.0e-29 131.7 137 58.4
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 5.2e-29 131.3 137 60.6
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 1.2e-28 130.2 132 59.1
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 1.5e-28 129.8 149 57.7
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 2.0e-28 129.4 137 57.7
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 2.6e-28 129.0 137 56.9
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 2.6e-28 129.0 152 54.6
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 2.6e-28 129.0 152 55.9
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 2.6e-28 129.0 135 60.7
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 1.3e-27 126.7 135 58.5
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 2.2e-27 125.9 125 62.4
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 4.9e-27 124.8 131 59.5
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 6.3e-27 124.4 129 59.7
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 1.4e-26 123.2 132 54.5
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 4.1e-26 121.7 129 56.6
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 5.4e-26 121.3 132 53.8
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 5.4e-26 121.3 133 59.4
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 7.0e-26 120.9 132 59.8
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 7.0e-26 120.9 132 59.8
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 1.6e-25 119.8 132 59.8
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 2.0e-25 119.4 178 46.1
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 2.7e-25 119.0 132 56.8
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 7.8e-25 117.5 145 54.5
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 1.0e-24 117.1 125 58.4
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 1.7e-24 116.3 132 55.3
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 3.8e-24 115.2 123 57.7
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 8.6e-24 114.0 129 55.0
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 8.6e-24 114.0 102 64.7
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 1.5e-23 113.2 127 57.5
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 4.3e-23 111.7 89 67.4
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 7.3e-23 110.9 123 55.3
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 9.5e-23 110.5 160 48.8
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 1.2e-22 110.2 89 66.3
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 2.8e-22 109.0 133 51.9
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 4.7e-22 108.2 103 59.2
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 4.7e-22 108.2 120 53.3
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 4.7e-22 108.2 141 52.5
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 8.0e-22 107.5 98 65.3
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 8.0e-22 107.5 89 66.3
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 8.0e-22 107.5 91 68.1
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.3e-21 105.9 143 51.7
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 5.2e-21 104.8 106 54.7
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 6.8e-21 104.4 89 64.0
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 6.8e-21 104.4 118 55.1
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 6.8e-21 104.4 105 60.0
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 3.4e-20 102.1 98 58.2
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 3.4e-20 102.1 98 58.2
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 4.4e-20 101.7 132 49.2
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 4.4e-20 101.7 90 62.2
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 5.7e-20 101.3 100 61.0
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 7.5e-20 100.9 125 53.6
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 9.8e-20 100.5 123 52.0
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 9.8e-20 100.5 127 51.2
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 9.8e-20 100.5 90 61.1
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 1.3e-19 100.1 122 51.6
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 3.7e-19 98.6 129 50.4
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 4.9e-19 98.2 92 60.9
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 4.9e-19 98.2 71 66.2
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 7.0e-18 94.4 97 56.7
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 1.6e-17 93.2 100 53.0
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 1.6e-17 93.2 65 73.8
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 1.6e-17 93.2 60 78.3
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 3.5e-17 92.0 119 51.3
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 1.0e-16 90.5 135 44.4
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 1.3e-16 90.1 103 52.4
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 5.0e-16 88.2 63 74.6
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 2.5e-15 85.9 57 73.7
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 1.6e-14 83.2 59 69.5
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 3.6e-14 82.0 119 45.4
Manes.07G054000 Manihot esculenta HOM05D007571 ORTHO05D009439 2.3e-13 79.3 89 60.7
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 2.0e-12 76.3 109 46.8
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 4.4e-12 75.1 109 43.1
Aa31LG10G4150 Aethionema arabicum HOM05D007571 ORTHO05D009439 8.3e-11 70.9 91 48.4
Potri.009G086400 Populus trichocarpa HOM05D007571 ORTHO05D009439 6.0e-09 64.7 87 51.7
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 1.9e-07 59.7 122 39.3


User provided reference genes

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