Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C018503.2 Cucumis melo HOM05D000270 ORTHO05D000163 6.5e-39 163.7 89 100.0
ClCG02G006630 Citrullus lanatus HOM05D000270 ORTHO05D000163 4.7e-37 157.5 89 84.3
Sed0017754 Sechium edule HOM05D000270 ORTHO05D000163 2.6e-32 141.7 89 74.2
Cfa004614 Carpinus fangiana HOM05D000270 ORTHO05D000163 2.3e-12 75.5 88 48.9
CsaV3_4G000520 Cucumis sativus L. HOM05D000270 ORTHO05D000163 8.9e-12 73.6 88 45.5
MELO3C017982.2 Cucumis melo HOM05D000270 ORTHO05D000163 2.6e-11 72.0 88 44.3
Manes.07G065400 Manihot esculenta HOM05D000270 ORTHO05D000163 3.4e-11 71.6 88 43.2
QL11p032321 Quercus lobata HOM05D000270 ORTHO05D000163 3.4e-11 71.6 87 44.8
Solyc01g107370.3 Solanum lycopersicum HOM05D000270 ORTHO05D000163 5.7e-11 70.9 91 47.3
CAN.G1054.14 Capsicum annuum HOM05D000270 ORTHO05D000163 7.5e-11 70.5 88 45.5
Eucgr.F02269 Eucalyptus grandis HOM05D000270 ORTHO05D000163 7.5e-11 70.5 77 48.1
CiPaw.05G014000 Carya illinoinensis HOM05D000270 ORTHO05D000163 9.8e-11 70.1 88 43.2
Eucgr.I01086 Eucalyptus grandis HOM05D000270 ORTHO05D000163 9.8e-11 70.1 86 44.2
GSVIVG01009384001 Vitis vinifera HOM05D000270 ORTHO05D000163 9.8e-11 70.1 86 46.5
arahy.Tifrunner.gnm1.ann1.SY561U Arachis hypogaea HOM05D000270 ORTHO05D000163 1.7e-10 69.3 88 43.2
Glyma.17G237100 Glycine max HOM05D000270 ORTHO05D000163 2.2e-10 68.9 82 46.3
Sopen01g049610 Solanum pennellii HOM05D000270 ORTHO05D000163 2.2e-10 68.9 91 46.2
PGSC0003DMG400025759 Solanum tuberosum HOM05D000270 ORTHO05D000163 2.2e-10 68.9 91 46.2
arahy.Tifrunner.gnm1.ann1.TJLQ2T Arachis hypogaea HOM05D000270 ORTHO05D000163 2.8e-10 68.6 88 43.2
Phvul.007G042400 Phaseolus vulgaris HOM05D000270 ORTHO05D000163 2.8e-10 68.6 90 45.6
Glyma.14G087200 Glycine max HOM05D000270 ORTHO05D000163 4.9e-10 67.8 82 45.1
Gohir.A03G184900 Gossypium hirsutum HOM05D000270 ORTHO05D000163 4.9e-10 67.8 90 44.4
ClCG10G010600 Citrullus lanatus HOM05D000270 ORTHO05D000163 6.3e-10 67.4 88 43.2
Lalb_Chr02g0145181 Lupinus albus HOM05D000270 ORTHO05D000163 6.3e-10 67.4 84 45.2
arahy.Tifrunner.gnm1.ann1.XG1GJV Arachis hypogaea HOM05D000270 ORTHO05D000163 8.3e-10 67.0 90 43.3
Sopen04g031820 Solanum pennellii HOM05D000270 ORTHO05D000163 8.3e-10 67.0 88 44.3
arahy.Tifrunner.gnm1.ann1.7Y3SM7 Arachis hypogaea HOM05D000270 ORTHO05D000163 1.1e-09 66.6 90 43.3
CAN.G606.25 Capsicum annuum HOM05D000270 ORTHO05D000163 1.1e-09 66.6 91 44.0
Lj5g0022476 Lotus japonicus HOM05D000270 ORTHO05D000163 1.1e-09 66.6 84 44.0
Actinidia08262 Actinidia chinensis HOM05D000270 ORTHO05D000163 1.4e-09 66.2 77 46.8
Cc02_g19510 Coffea canephora HOM05D000270 ORTHO05D000163 1.4e-09 66.2 88 43.2
MD05G1093700 Malus domestica HOM05D000270 ORTHO05D000163 1.4e-09 66.2 81 46.9
PGSC0003DMG400021517 Solanum tuberosum HOM05D000270 ORTHO05D000163 1.4e-09 66.2 88 43.2
Glyma.10G259800 Glycine max HOM05D000270 ORTHO05D000163 1.8e-09 65.9 90 43.3
Hma1.2p1_0923F.1_g237090 Hydrangea macrophylla HOM05D000270 ORTHO05D000163 2.4e-09 65.5 88 42.0
RhsimUnG0126700 Rhododendron simsii HOM05D000270 ORTHO05D000163 2.4e-09 65.5 88 43.2
Cfa017882 Carpinus fangiana HOM05D000270 ORTHO05D000163 4.1e-09 64.7 82 41.5
DCAR_029100 Daucus carota HOM05D000270 ORTHO05D000163 4.1e-09 64.7 88 46.6
Dinv40378 Davidia involucrata HOM05D000270 ORTHO05D000163 5.4e-09 64.3 77 46.8
Duzib132G0053 Durio zibethinus HOM05D000270 ORTHO05D000163 7.0e-09 63.9 84 44.0
Peaxi162Scf00081g00088 Petunia axillaris HOM05D000270 ORTHO05D000163 7.0e-09 63.9 88 42.0
vmacro04582 Vaccinium macrocarpon HOM05D000270 ORTHO05D000163 7.0e-09 63.9 77 46.8
Phvul.009G069900 Phaseolus vulgaris HOM05D000270 ORTHO05D000163 9.2e-09 63.5 88 40.9
Gohir.D02G206400 Gossypium hirsutum HOM05D000270 ORTHO05D000163 1.2e-08 63.2 90 42.2
Gorai.005G233800 Gossypium raimondii HOM05D000270 ORTHO05D000163 1.2e-08 63.2 90 42.2
Rhsim11G0155500 Rhododendron simsii HOM05D000270 ORTHO05D000163 1.2e-08 63.2 88 42.0
Manes.05G179800 Manihot esculenta HOM05D000270 ORTHO05D000163 2.0e-08 62.4 82 41.5
CANSAT25G3523 Cannabis sativa HOM05D000270 ORTHO05D000163 4.5e-08 61.2 88 39.8
Lsat_1_v5_gn_1_23380 Lactuca sativa HOM05D000270 ORTHO05D000163 7.8e-08 60.5 77 42.9
Thecc.02G112300 Theobroma cacao HOM05D000270 ORTHO05D000163 7.8e-08 60.5 90 43.3
Ciclev10029695m.g Citrus clementina HOM05D000270 ORTHO05D000163 1.0e-07 60.1 79 41.8
Prupe.8G138400 Prunus persica HOM05D000270 ORTHO05D000163 1.0e-07 60.1 93 43.0
DCAR_001662 Daucus carota HOM05D000270 ORTHO05D000163 1.3e-07 59.7 88 43.2
Nitab4.5_0000210g0050 Nicotiana tabacum HOM05D000270 ORTHO05D000163 1.3e-07 59.7 88 40.9
Medtr1g106915 Medicago truncatula HOM05D000270 ORTHO05D000163 1.7e-07 59.3 84 42.9
Ciclev10002979m.g Citrus clementina HOM05D000270 ORTHO05D000163 2.3e-07 58.9 88 38.6
Nitab4.5_0006450g0020 Nicotiana tabacum HOM05D000270 ORTHO05D000163 2.9e-07 58.5 88 39.8
CDE06G0615 Ceratophyllum demersum HOM05D000270 ORTHO05D000163 5.0e-07 57.8 86 44.2
CSS0009594 Camellia sinensis var. sinensis HOM05D000270 ORTHO05D000163 8.6e-07 57.0 77 42.9
CSS0015778 Camellia sinensis var. sinensis HOM05D000270 ORTHO05D000163 8.6e-07 57.0 77 42.9
Migut.B00410 Erythranthe guttata HOM05D000270 ORTHO05D000163 8.6e-07 57.0 94 39.4
Cfa004086 Carpinus fangiana HOM05D000270 ORTHO05D000163 3.3e-06 55.1 100 38.0
THA.LOC104799796 Tarenaya hassleriana HOM05D000270 ORTHO05D000163 3.3e-06 55.1 91 36.3
CAN.G1323.3 Capsicum annuum HOM05D000270 ORTHO05D000163 4.3e-06 54.7 82 39.0
C03p50320 Brassica napus HOM05D000270 ORTHO05D000163 5.6e-06 54.3 60 45.0
RhsimUnG0095200 Rhododendron simsii HOM05D000270 ORTHO05D000163 7.3e-06 53.9 82 42.7
BcaC01g03630 Brassica carinata HOM05D000270 ORTHO05D000163 9.5e-06 53.5 60 45.0
A03p41220 Brassica napus HOM05D000270 ORTHO05D000163 9.5e-06 53.5 60 45.0
BraA03t13275Z Brassica rapa HOM05D000270 ORTHO05D000163 9.5e-06 53.5 60 45.0
Nn4g24253 Nelumbo nucifera HOM05D000270 ORTHO05D000163 9.5e-06 53.5 82 40.2


User provided reference genes

Program Settings