Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C018447.2 Cucumis melo HOM05D000245 ORTHO05D000020 3.6e-44 181.4 107 100.0
CsaV3_7G008630 Cucumis sativus L. HOM05D000245 ORTHO05D000020 1.2e-36 156.4 82 90.2
ClCG02G005910 Citrullus lanatus HOM05D000245 ORTHO05D000020 2.4e-27 125.6 89 75.3
Haze_10079 Corylus avellana HOM05D000245 ORTHO05D000020 8.2e-12 73.9 77 53.2
Sed0026144 Sechium edule HOM05D000245 ORTHO05D000020 1.1e-11 73.6 77 50.6
Haze_10078 Corylus avellana HOM05D000245 ORTHO05D000020 3.1e-11 72.0 75 54.7
TWI79G1533 Tripterygium wilfordii HOM05D000245 ORTHO05D000020 3.8e-09 65.1 85 47.1
Lj9A358G41 Lonicera japonica HOM05D000245 ORTHO05D000020 4.9e-09 64.7 86 46.5
FAN15G0061 Fragaria x ananassa HOM05D000245 ORTHO05D000020 1.1e-08 63.5 81 37.0
Sed0018799 Sechium edule HOM05D000245 ORTHO05D000020 1.4e-08 63.2 94 43.6
Eucgr.I01153 Eucalyptus grandis HOM05D000245 ORTHO05D000020 1.9e-08 62.8 94 39.4
Potri.009G101900 Populus trichocarpa HOM05D000245 ORTHO05D000020 1.9e-08 62.8 92 42.4
FAN15G2684 Fragaria x ananassa HOM05D000245 ORTHO05D000020 5.5e-08 61.2 78 43.6
FAN27G3315 Fragaria x ananassa HOM05D000245 ORTHO05D000020 5.5e-08 61.2 78 37.2
Actinidia16492 Actinidia chinensis HOM05D000245 ORTHO05D000020 7.1e-08 60.8 88 44.3
ClCG05G009970 Citrullus lanatus HOM05D000245 ORTHO05D000020 7.1e-08 60.8 107 39.3
FAN20G0843 Fragaria x ananassa HOM05D000245 ORTHO05D000020 7.1e-08 60.8 78 42.3
TWI31G0072 Tripterygium wilfordii HOM05D000245 ORTHO05D000020 7.1e-08 60.8 74 45.9
CiPaw.06G172500 Carya illinoinensis HOM05D000245 ORTHO05D000020 1.2e-07 60.1 74 50.0
FvH4_2g06050 Fragaria vesca HOM05D000245 ORTHO05D000020 1.2e-07 60.1 78 42.3
FvH4_2g06060 Fragaria vesca HOM05D000245 ORTHO05D000020 1.2e-07 60.1 78 38.5
FAN27G2008 Fragaria x ananassa HOM05D000245 ORTHO05D000020 1.2e-07 60.1 78 42.3
BcaB03g11834 Brassica carinata HOM05D000245 ORTHO05D000020 1.6e-07 59.7 78 44.9
Migut.B00347 Erythranthe guttata HOM05D000245 ORTHO05D000020 1.6e-07 59.7 79 41.8
Manes.10G056300 Manihot esculenta HOM05D000245 ORTHO05D000020 1.6e-07 59.7 99 39.4
SalBow6G4653 Salvia bowleyana HOM05D000245 ORTHO05D000020 1.6e-07 59.7 79 36.7
Dinv39856 Davidia involucrata HOM05D000245 ORTHO05D000020 2.1e-07 59.3 82 40.2
Cpa.g.sc62.11 Carica papaya HOM05D000245 ORTHO05D000020 3.5e-07 58.5 81 43.2
FAN24G1430 Fragaria x ananassa HOM05D000245 ORTHO05D000020 4.6e-07 58.2 78 38.5
Rhsim05G0084300 Rhododendron simsii HOM05D000245 ORTHO05D000020 4.6e-07 58.2 95 42.1
Actinidia16494 Actinidia chinensis HOM05D000245 ORTHO05D000020 6.0e-07 57.8 82 42.7
CsaV3_3G018600 Cucumis sativus L. HOM05D000245 ORTHO05D000020 6.0e-07 57.8 95 41.1
Sabra04G0093000 Salix brachista HOM05D000245 ORTHO05D000020 6.0e-07 57.8 94 41.5
CSS0047404 Camellia sinensis var. sinensis HOM05D000245 ORTHO05D000020 1.3e-06 56.6 76 44.7
Lsat_1_v5_gn_9_110040 Lactuca sativa HOM05D000245 ORTHO05D000020 1.3e-06 56.6 89 38.2
Nn1g04860 Nelumbo nucifera HOM05D000245 ORTHO05D000020 1.3e-06 56.6 79 39.2
Prupe.8G125100 Prunus persica HOM05D000245 ORTHO05D000020 1.3e-06 56.6 89 39.3
Sabra09G0077900 Salix brachista HOM05D000245 ORTHO05D000020 1.3e-06 56.6 97 41.2
Dinv23620 Davidia involucrata HOM05D000245 ORTHO05D000020 1.8e-06 56.2 91 37.4
FAN20G0248 Fragaria x ananassa HOM05D000245 ORTHO05D000020 1.8e-06 56.2 76 36.8
Phvul.003G292400 Phaseolus vulgaris HOM05D000245 ORTHO05D000020 1.8e-06 56.2 88 44.3
Potri.004G141200 Populus trichocarpa HOM05D000245 ORTHO05D000020 1.8e-06 56.2 86 41.9
Sed0021609 Sechium edule HOM05D000245 ORTHO05D000020 1.8e-06 56.2 96 40.6
PGSC0003DMG400008263 Solanum tuberosum HOM05D000245 ORTHO05D000020 2.3e-06 55.8 79 38.0
THA.LOC104807359 Tarenaya hassleriana HOM05D000245 ORTHO05D000020 2.3e-06 55.8 80 42.5
BcaNung06977 Brassica carinata HOM05D000245 ORTHO05D000020 3.0e-06 55.5 81 38.3
MD05G1080900 Malus domestica HOM05D000245 ORTHO05D000020 3.0e-06 55.5 84 40.5
Nitab4.5_0001361g0060 Nicotiana tabacum HOM05D000245 ORTHO05D000020 3.0e-06 55.5 95 37.9
HanXRQChr09g0250411 Helianthus annuus HOM05D000245 ORTHO05D000020 3.9e-06 55.1 78 39.7
Atru.chr5.2701 Acer truncatum HOM05D000245 ORTHO05D000020 5.1e-06 54.7 91 42.9
MELO3C019506.2 Cucumis melo HOM05D000245 ORTHO05D000020 5.1e-06 54.7 104 38.5
Hma1.2p1_1849F.1_g305320 Hydrangea macrophylla HOM05D000245 ORTHO05D000020 5.1e-06 54.7 80 43.8
CSS0013312 Camellia sinensis var. sinensis HOM05D000245 ORTHO05D000020 6.7e-06 54.3 83 42.2
CSS0014363 Camellia sinensis var. sinensis HOM05D000245 ORTHO05D000020 6.7e-06 54.3 83 42.2
CSS0023536 Camellia sinensis var. sinensis HOM05D000245 ORTHO05D000020 6.7e-06 54.3 78 39.7
CSS0023891 Camellia sinensis var. sinensis HOM05D000245 ORTHO05D000020 6.7e-06 54.3 78 39.7
Rhsim11G0165600 Rhododendron simsii HOM05D000245 ORTHO05D000020 6.7e-06 54.3 74 41.9
SGA_v2.0_scaffold90G27657 Striga asiatica HOM05D000245 ORTHO05D000020 6.7e-06 54.3 76 40.8
VMungo0251G2704 Vigna mungo HOM05D000245 ORTHO05D000020 6.7e-06 54.3 84 45.2
A08p16870 Brassica napus HOM05D000245 ORTHO05D000020 8.7e-06 53.9 79 36.7
BolC7t46488H Brassica oleracea HOM05D000245 ORTHO05D000020 8.7e-06 53.9 75 38.7
BraA08t33651Z Brassica rapa HOM05D000245 ORTHO05D000020 8.7e-06 53.9 79 36.7
CSS0034219 Camellia sinensis var. sinensis HOM05D000245 ORTHO05D000020 8.7e-06 53.9 82 37.8
HanXRQChr16g0501311 Helianthus annuus HOM05D000245 ORTHO05D000020 8.7e-06 53.9 76 40.8


User provided reference genes

Program Settings