Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C018179.2 Cucumis melo HOM05D008268 ORTHO05D010144 2.1e-177 625.5 311 100.0
CsaV3_3G044260 Cucumis sativus L. HOM05D008268 ORTHO05D010144 1.3e-131 473.4 317 80.4
ClCG11G018600 Citrullus lanatus HOM05D008268 ORTHO05D010144 7.4e-106 387.9 339 66.4
Sed0023643 Sechium edule HOM05D008268 ORTHO05D010144 7.3e-45 185.3 293 47.1
Thecc.07G068700 Theobroma cacao HOM05D008268 ORTHO05D010144 6.9e-27 125.6 300 37.7
Duzib170G0253 Durio zibethinus HOM05D008268 ORTHO05D010144 2.7e-23 113.6 272 36.0
Gohir.A01G069900 Gossypium hirsutum HOM05D008268 ORTHO05D010144 2.5e-21 107.1 313 32.9
Gorai.002G077500 Gossypium raimondii HOM05D008268 ORTHO05D010144 1.6e-20 104.4 307 33.6
CiPaw.11G178900 Carya illinoinensis HOM05D008268 ORTHO05D010144 2.1e-20 104.0 352 34.4
Gohir.D01G057100 Gossypium hirsutum HOM05D008268 ORTHO05D010144 2.1e-20 104.0 307 33.6
Duzib213G0412 Durio zibethinus HOM05D008268 ORTHO05D010144 1.2e-18 98.2 270 34.8
Prupe.4G192500 Prunus persica HOM05D008268 ORTHO05D010144 1.7e-17 94.4 333 34.5
VMungo1080G0851 Vigna mungo HOM05D008268 ORTHO05D010144 2.9e-17 93.6 318 31.8
Dinv08361 Davidia involucrata HOM05D008268 ORTHO05D010144 3.8e-17 93.2 352 31.0
QL08p017136 Quercus lobata HOM05D008268 ORTHO05D010144 3.8e-17 93.2 325 32.0
MD11G1234600 Malus domestica HOM05D008268 ORTHO05D010144 4.9e-17 92.8 395 33.2
Cfa020486 Carpinus fangiana HOM05D008268 ORTHO05D010144 1.9e-16 90.9 302 33.8
Dinv22349 Davidia involucrata HOM05D008268 ORTHO05D010144 2.4e-16 90.5 340 31.2
Manes.15G081401 Manihot esculenta HOM05D008268 ORTHO05D010144 4.2e-16 89.7 340 31.5
Phvul.005G087800 Phaseolus vulgaris HOM05D008268 ORTHO05D010144 1.6e-15 87.8 308 33.4
Cpa.g.sc12.16 Carica papaya HOM05D008268 ORTHO05D010144 2.1e-15 87.4 347 32.6
Glyma.13G282800 Glycine max HOM05D008268 ORTHO05D010144 7.9e-15 85.5 341 30.8
Potri.011G125600 Populus trichocarpa HOM05D019858 ORTHO05D010144 1.1e-13 81.6 348 29.3
Potri.001G409000 Populus trichocarpa HOM05D019858 ORTHO05D010144 2.5e-13 80.5 354 29.1
Sabra11G0111900 Salix brachista HOM05D019858 ORTHO05D010144 2.5e-13 80.5 327 30.0
Rhsim06G0192000 Rhododendron simsii HOM05D008268 ORTHO05D010144 4.3e-13 79.7 328 30.5
Sabra16G0271800 Salix brachista HOM05D019858 ORTHO05D010144 5.6e-13 79.3 329 29.8
Sabra16G0276800 Salix brachista HOM05D019858 ORTHO05D010144 5.6e-13 79.3 329 29.8
GSVIVG01014468001 Vitis vinifera HOM05D008268 ORTHO05D010144 3.7e-12 76.6 202 39.1
Lsat_1_v5_gn_0_5400 Lactuca sativa HOM05D008268 ORTHO05D010144 6.2e-12 75.9 230 31.3
MD03G1216800 Malus domestica HOM05D008268 ORTHO05D010144 8.1e-12 75.5 285 34.7
Atru.chr2.2941 Acer truncatum HOM05D008268 ORTHO05D010144 1.1e-11 75.1 339 28.9
Psat5g247560 Pisum sativum HOM05D008268 ORTHO05D010144 2.4e-11 73.9 330 28.5
TAR626G0659 Trochodendron aralioides HOM05D008268 ORTHO05D010144 5.3e-11 72.8 277 31.8
TWI38G2068 Tripterygium wilfordii HOM05D008268 ORTHO05D010144 9.0e-11 72.0 335 29.3
Haze_09553 Corylus avellana HOM05D008268 ORTHO05D010144 1.3e-09 68.2 260 33.5
PGR083G1493 Punica granatum HOM05D008268 ORTHO05D010144 1.3e-09 68.2 166 36.7
Eucgr.F01065 Eucalyptus grandis HOM05D008268 ORTHO05D010144 3.8e-09 66.6 200 36.5
CSS0041304 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 4.9e-09 66.2 288 29.5
Nitab4.5_0000297g0210 Nicotiana tabacum HOM05D015394 ORTHO05D017774 1.4e-08 64.7 330 30.6
Actinidia09966 Actinidia chinensis HOM05D008268 ORTHO05D010144 2.5e-08 63.9 293 33.1
CSS0042196 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 2.5e-08 63.9 288 29.9
Migut.M01849 Erythranthe guttata HOM05D008268 ORTHO05D010144 2.5e-08 63.9 269 27.5
MBI02_g38752_MAGBIO Magnolia biondii HOM05D008268 ORTHO05D010144 3.2e-08 63.5 312 30.1
MBI02_g46151_MAGBIO Magnolia biondii HOM05D008268 ORTHO05D010144 3.2e-08 63.5 312 30.1
Nitab4.5_0001252g0050 Nicotiana tabacum HOM05D015394 ORTHO05D017774 3.2e-08 63.5 332 30.1
THA.LOC104799901 Tarenaya hassleriana HOM05D010655 ORTHO05D012747 4.6e-07 59.7 349 28.1
Nn1g06831 Nelumbo nucifera HOM05D008268 ORTHO05D010144 6.0e-07 59.3 78 52.6
THA.LOC104809278 Tarenaya hassleriana HOM05D010655 ORTHO05D012747 6.0e-07 59.3 161 40.4
SHI51816 Sapria himalayana HOM05D008268 ORTHO05D010144 3.0e-06 57.0 165 35.2
Sabra15G0071800 Salix brachista HOM05D019858 ORTHO05D010144 5.1e-06 56.2 171 32.2


User provided reference genes

Program Settings