Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 3.8e-194 681.4 363 100.0
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.4e-188 662.1 363 97.0
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 9.1e-172 607.1 363 89.0
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 9.7e-158 560.5 363 83.7
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 2.7e-147 525.8 359 77.7
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 5.0e-146 521.5 351 78.9
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 2.5e-145 519.2 363 75.8
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 4.7e-144 515.0 377 74.5
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 6.1e-144 514.6 332 78.9
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 1.0e-143 513.8 337 79.2
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 1.8e-143 513.1 333 79.6
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 2.6e-142 509.2 351 73.8
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 2.2e-141 506.1 355 74.9
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 3.7e-141 505.4 336 78.0
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 3.7e-141 505.4 342 76.9
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 8.3e-141 504.2 339 77.6
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 1.1e-140 503.8 363 74.4
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 1.1e-140 503.8 339 78.2
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 1.1e-140 503.8 363 73.3
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 1.4e-140 503.4 358 75.1
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 2.4e-140 502.7 355 74.4
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 4.1e-140 501.9 359 73.8
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 5.4e-140 501.5 365 72.9
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 7.0e-140 501.1 337 76.6
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 9.2e-140 500.7 339 77.3
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 1.6e-139 500.0 357 73.9
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 7.8e-139 497.7 355 73.8
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 7.8e-139 497.7 367 72.8
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 1.3e-138 496.9 359 73.3
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 2.3e-138 496.1 363 72.2
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 2.9e-138 495.7 337 75.4
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 3.8e-138 495.4 333 76.3
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 5.0e-138 495.0 359 73.5
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 1.1e-137 493.8 364 74.2
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 1.1e-137 493.8 363 72.7
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 5.6e-137 491.5 336 75.3
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 7.3e-137 491.1 337 76.0
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 7.3e-137 491.1 336 75.6
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 1.2e-136 490.3 336 75.6
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 1.2e-136 490.3 336 75.9
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 8.0e-136 487.6 363 72.2
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 1.4e-135 486.9 369 71.3
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 1.4e-135 486.9 336 75.3
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 3.0e-135 485.7 332 75.3
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 3.0e-135 485.7 333 76.0
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 4.0e-135 485.3 369 71.0
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 6.8e-135 484.6 364 70.9
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 1.5e-134 483.4 336 75.6
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 2.6e-134 482.6 345 75.9
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 5.8e-134 481.5 335 73.7
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 5.8e-134 481.5 353 70.8
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 7.5e-134 481.1 346 74.0
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 9.8e-134 480.7 352 72.7
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 9.8e-134 480.7 337 75.7
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 9.8e-134 480.7 352 72.2
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 1.7e-133 479.9 349 72.5
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 3.7e-133 478.8 354 71.2
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 3.7e-133 478.8 338 74.6
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 3.7e-133 478.8 353 72.5
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 3.7e-133 478.8 342 74.6
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 4.9e-133 478.4 332 74.7
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 1.4e-132 476.9 332 73.2
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 2.4e-132 476.1 353 70.3
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 2.4e-132 476.1 354 70.9
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 3.2e-132 475.7 332 74.1
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 4.1e-132 475.3 353 69.4
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 5.4e-132 474.9 333 75.1
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 2.0e-131 473.0 355 71.0
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 3.0e-130 469.2 333 74.8
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 6.6e-130 468.0 335 72.5
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 1.9e-129 466.5 354 69.5
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 2.5e-129 466.1 353 68.8
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 4.3e-129 465.3 346 70.5
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 5.6e-129 464.9 332 72.0
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 9.5e-129 464.2 353 68.6
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 9.5e-129 464.2 353 68.6
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 9.5e-129 464.2 353 68.6
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 1.2e-128 463.8 348 71.6
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 3.6e-128 462.2 352 70.2
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 6.2e-128 461.5 352 69.9
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 1.1e-127 460.7 354 68.9
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 5.8e-126 454.9 340 71.8
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 7.5e-126 454.5 332 69.0
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 1.7e-125 453.4 298 78.9
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 3.7e-125 452.2 338 72.2
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 1.1e-121 440.7 339 69.6
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 1.5e-121 440.3 347 66.6
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 3.1e-119 432.6 269 81.4
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 2.2e-117 426.4 269 80.7
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 1.1e-105 387.5 354 57.6
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.9e-105 386.7 273 74.4
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 6.9e-103 378.3 328 58.8
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 8.4e-101 371.3 371 58.2
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 3.0e-98 362.8 332 57.2
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 4.0e-87 325.9 291 63.2
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 7.6e-86 321.6 193 89.6
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 3.2e-84 316.2 245 69.8
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 2.9e-77 293.1 250 63.2
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 1.1e-71 274.6 269 57.6
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.6e-70 270.0 155 92.3
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 5.9e-70 268.9 353 45.9
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.4e-68 264.2 185 80.0
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 2.7e-67 260.0 228 62.7
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 1.4e-66 257.7 328 46.0
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 4.3e-65 252.7 280 50.4
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 7.9e-59 231.9 352 45.7
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 1.8e-58 230.7 364 42.3
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 2.3e-58 230.3 193 64.8
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.1e-52 211.5 114 98.2
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 1.4e-50 204.5 169 60.9
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 7.4e-49 198.7 140 73.6
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 1.0e-42 178.3 148 63.5
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 5.9e-38 162.5 264 40.2
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 2.7e-35 153.7 91 84.6
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 3.4e-25 120.2 133 51.1
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 3.7e-24 116.7 66 87.9
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 8.6e-21 105.5 88 62.5
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 2.8e-19 100.5 57 87.7
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 1.0e-18 98.6 119 52.9
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 2.5e-12 77.4 43 88.4
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 4.0e-10 70.1 46 76.1
Zm00001eb241410 Zea mays HOM05D006520 ORTHO05D442212 1.4e-07 61.6 48 60.4


User provided reference genes

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