Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C017991.2 Cucumis melo HOM05D005520 ORTHO05D006633 1.6e-82 309.3 150 100.0
CsaV3_4G000440 Cucumis sativus L. HOM05D005520 ORTHO05D006633 2.5e-59 232.3 150 78.0
Sed0007262 Sechium edule HOM05D005520 ORTHO05D006633 4.0e-33 145.2 110 70.9
ClCG10G010520 Citrullus lanatus HOM05D005520 ORTHO05D006633 1.0e-28 130.6 149 51.7
Cfa004647 Carpinus fangiana HOM05D005520 ORTHO05D006633 5.8e-24 114.8 113 56.6
FAN15G3606 Fragaria x ananassa HOM05D005520 ORTHO05D006633 7.6e-24 114.4 110 59.1
FvH4_2g03990 Fragaria vesca HOM05D005520 ORTHO05D006633 1.0e-23 114.0 110 59.1
FAN24G1644 Fragaria x ananassa HOM05D005520 ORTHO05D006633 1.3e-23 113.6 109 59.6
Haze_10245 Corylus avellana HOM05D005520 ORTHO05D006633 2.9e-23 112.5 113 55.8
CiPaw.06G167100 Carya illinoinensis HOM05D005520 ORTHO05D006633 3.8e-23 112.1 113 57.5
RcHm_v2.0_Chr6g0253041 Rosa chinensis HOM05D005520 ORTHO05D006633 4.9e-23 111.7 113 57.5
QL11p031741 Quercus lobata HOM05D005520 ORTHO05D006633 6.5e-23 111.3 115 55.7
FAN20G2059 Fragaria x ananassa HOM05D005520 ORTHO05D006633 1.1e-22 110.5 110 57.3
PGR042G2710 Punica granatum HOM05D005520 ORTHO05D006633 4.2e-22 108.6 113 56.6
THA.LOC104825832 Tarenaya hassleriana HOM05D005520 ORTHO05D006633 4.6e-21 105.1 112 57.1
Actinidia34369 Actinidia chinensis HOM05D005520 ORTHO05D006633 1.0e-20 104.0 110 53.6
Manes.10G081300 Manihot esculenta HOM05D005520 ORTHO05D006633 1.0e-20 104.0 113 55.8
Eucgr.G01264 Eucalyptus grandis HOM05D005520 ORTHO05D006633 1.3e-20 103.6 114 53.5
GSVIVG01037859001 Vitis vinifera HOM05D005520 ORTHO05D006633 3.0e-20 102.4 113 54.0
BraA08t32384Z Brassica rapa HOM05D005520 ORTHO05D006633 3.9e-20 102.1 111 50.5
Duzib052G0352 Durio zibethinus HOM05D005520 ORTHO05D006633 3.9e-20 102.1 107 53.3
Potri.009G090200 Populus trichocarpa HOM05D005520 ORTHO05D006633 5.1e-20 101.7 118 53.4
Sabra09G0069800 Salix brachista HOM05D005520 ORTHO05D006633 5.1e-20 101.7 118 52.5
A08p03510 Brassica napus HOM05D005520 ORTHO05D006633 6.7e-20 101.3 111 49.5
COL.COLO4_32538 Corchorus olitorius HOM05D005520 ORTHO05D006633 6.7e-20 101.3 116 50.9
Gohir.D04G160500 Gossypium hirsutum HOM05D005520 ORTHO05D006633 1.1e-19 100.5 107 53.3
Gorai.012G148200 Gossypium raimondii HOM05D005520 ORTHO05D006633 1.1e-19 100.5 107 53.3
Lj3g0017538 Lotus japonicus HOM05D005520 ORTHO05D006633 1.1e-19 100.5 113 53.1
Prupe.8G141400 Prunus persica HOM05D005520 ORTHO05D006633 1.1e-19 100.5 114 51.8
Rhsim11G0154200 Rhododendron simsii HOM05D005520 ORTHO05D006633 1.1e-19 100.5 118 49.2
Nitab4.5_0000158g0130 Nicotiana tabacum HOM05D005520 ORTHO05D006633 1.5e-19 100.1 114 51.8
Thecc.02G114500 Theobroma cacao HOM05D005520 ORTHO05D006633 1.5e-19 100.1 107 52.3
EL10Ac8g19365 Beta vulgaris HOM05D005520 ORTHO05D006633 2.5e-19 99.4 110 52.7
BcaB04g17288 Brassica carinata HOM05D005520 ORTHO05D006633 2.5e-19 99.4 145 42.8
Glyma.15G237900 Glycine max HOM05D005520 ORTHO05D006633 2.5e-19 99.4 111 53.2
Gohir.A04G118800 Gossypium hirsutum HOM05D005520 ORTHO05D006633 2.5e-19 99.4 107 50.5
MD10G1103100 Malus domestica HOM05D005520 ORTHO05D006633 2.5e-19 99.4 114 53.5
AL1G57420 Arabidopsis lyrata HOM05D005520 ORTHO05D006633 3.3e-19 99.0 110 48.2
Sp1g36760 Schrenkiella parvula HOM05D005520 ORTHO05D006633 3.3e-19 99.0 113 49.6
Carub.0001s3909 Capsella rubella HOM05D005520 ORTHO05D006633 4.3e-19 98.6 112 50.0
Cpa.g.sc106.74 Carica papaya HOM05D005520 ORTHO05D006633 5.7e-19 98.2 123 48.8
Ciclev10029310m.g Citrus clementina HOM05D005520 ORTHO05D006633 5.7e-19 98.2 116 51.7
arahy.Tifrunner.gnm1.ann1.ZQ2RMB Arachis hypogaea HOM05D005520 ORTHO05D006633 7.4e-19 97.8 116 46.6
Hund12620 Selenicereus undatus HOM05D005520 ORTHO05D006633 1.3e-18 97.1 110 49.1
TPR.G18583 Trifolium pratense HOM05D005520 ORTHO05D006633 1.3e-18 97.1 112 49.1
Dinv42222 Davidia involucrata HOM05D005520 ORTHO05D006633 1.6e-18 96.7 113 48.7
Nitab4.5_0008364g0030 Nicotiana tabacum HOM05D005520 ORTHO05D006633 1.6e-18 96.7 114 50.0
Potri.001G296000 Populus trichocarpa HOM05D005520 ORTHO05D006633 1.6e-18 96.7 166 39.8
TWI14G1052 Tripterygium wilfordii HOM05D005520 ORTHO05D006633 1.6e-18 96.7 120 50.8
C03p89340 Brassica napus HOM05D005520 ORTHO05D006633 2.2e-18 96.3 111 50.5
BolC3t21249H Brassica oleracea HOM05D005520 ORTHO05D006633 2.2e-18 96.3 111 49.5
MD05G1097000 Malus domestica HOM05D005520 ORTHO05D006633 3.7e-18 95.5 118 49.2
unitig_37.g12800 Utricularia gibba HOM05D005520 ORTHO05D006633 3.7e-18 95.5 111 47.7
AT1G49880 Arabidopsis thaliana HOM05D005520 ORTHO05D006633 4.8e-18 95.1 112 47.3
Thhalv10011740m.g Eutrema salsugineum HOM05D005520 ORTHO05D006633 8.2e-18 94.4 112 49.1
arahy.Tifrunner.gnm1.ann1.DF92AY Arachis hypogaea HOM05D005520 ORTHO05D006633 1.1e-17 94.0 116 45.7
CARHR039940 Cardamine hirsuta HOM05D005520 ORTHO05D006633 1.1e-17 94.0 113 49.6
Medtr1g050465 Medicago truncatula HOM05D005520 ORTHO05D006633 1.1e-17 94.0 112 47.3
Psat4g180760 Pisum sativum HOM05D005520 ORTHO05D006633 1.4e-17 93.6 112 49.1
Sc18g0003610 Simmondsia chinensis HOM05D005520 ORTHO05D006633 1.4e-17 93.6 110 50.9
MSTRG.16689 Avicennia marina HOM05D005520 ORTHO05D006633 1.8e-17 93.2 112 47.3
CDE04G3180 Ceratophyllum demersum HOM05D005520 ORTHO05D006633 1.8e-17 93.2 111 49.5
Medtr8g045480 Medicago truncatula HOM05D005520 ORTHO05D006633 2.4e-17 92.8 112 49.1
CSS0014981 Camellia sinensis var. sinensis HOM05D005520 ORTHO05D006633 3.1e-17 92.4 114 49.1
Dinv15795 Davidia involucrata HOM05D005520 ORTHO05D006633 3.1e-17 92.4 111 49.5
Migut.F01600 Erythranthe guttata HOM05D005520 ORTHO05D006633 3.1e-17 92.4 112 48.2
Migut.B00429 Erythranthe guttata HOM05D005520 ORTHO05D009373 4.1e-17 92.0 112 47.3
TPR.G14598 Trifolium pratense HOM05D005520 ORTHO05D006633 5.3e-17 91.7 112 46.4
Lalb_Chr24g0402091 Lupinus albus HOM05D005520 ORTHO05D006633 1.5e-16 90.1 112 50.0
Oeu009678.2 Olea europaea HOM05D005520 ORTHO05D006633 3.4e-16 89.0 141 42.6
CANSAT25G2379 Cannabis sativa HOM05D005520 ORTHO05D006633 4.5e-16 88.6 108 49.1
Peaxi162Scf00429g00622 Petunia axillaris HOM05D005520 ORTHO05D006633 7.6e-16 87.8 116 49.1
VMungo0251G2197 Vigna mungo HOM05D005520 ORTHO05D006633 7.6e-16 87.8 112 48.2
Rhsim05G0090000 Rhododendron simsii HOM05D005520 ORTHO05D006633 1.0e-15 87.4 120 45.8
Gorai.013G049600 Gossypium raimondii HOM05D005520 ORTHO05D006633 1.3e-15 87.0 117 47.0
Phvul.003G276100 Phaseolus vulgaris HOM05D005520 ORTHO05D006633 1.3e-15 87.0 115 47.0
Gohir.D13G044800 Gossypium hirsutum HOM05D005520 ORTHO05D006633 1.7e-15 86.7 117 47.0
HanXRQChr03g0069991 Helianthus annuus HOM05D005520 ORTHO05D006633 2.2e-15 86.3 110 42.7
CAN.G689.10 Capsicum annuum HOM05D005520 ORTHO05D006633 3.8e-15 85.5 120 43.3
Psat7g087120 Pisum sativum HOM05D005520 ORTHO05D006633 5.0e-15 85.1 112 47.3
Solyc11g071960.2 Solanum lycopersicum HOM05D005520 ORTHO05D006633 5.0e-15 85.1 118 44.1
Lsat_1_v5_gn_9_112480 Lactuca sativa HOM05D005520 ORTHO05D006633 8.5e-15 84.3 119 42.0
Nn1g07564 Nelumbo nucifera HOM05D005520 ORTHO05D006633 1.9e-14 83.2 114 40.4
DCAR_021961 Daucus carota HOM05D005520 ORTHO05D006633 2.5e-14 82.8 110 47.3
Lj4g0000264 Lotus japonicus HOM05D005520 ORTHO05D006633 4.2e-14 82.0 113 48.7
Psat6g139520 Pisum sativum HOM05D005520 ORTHO05D006633 1.2e-13 80.5 110 44.5
Sopen11g029630 Solanum pennellii HOM05D005520 ORTHO05D006633 2.1e-13 79.7 118 42.4
ATR0165G041 Amborella trichopoda HOM05D005520 ORTHO05D006633 6.1e-13 78.2 112 39.3
Aqoxy6G02716 Aquilegia oxysepala HOM05D005520 ORTHO05D006633 6.1e-13 78.2 117 41.9
vmacro01971 Vaccinium macrocarpon HOM05D005520 ORTHO05D006633 1.0e-12 77.4 42 83.3
Lj5A217G90 Lonicera japonica HOM05D005520 ORTHO05D006633 1.4e-12 77.0 64 64.1
PSO541G2579 Papaver somniferum HOM05D005520 ORTHO05D006633 1.8e-12 76.6 109 45.9
SalBow6G6323 Salvia bowleyana HOM05D005520 ORTHO05D006633 1.8e-12 76.6 145 41.4
PSO675G3202 Papaver somniferum HOM05D005520 ORTHO05D006633 3.0e-12 75.9 109 45.0
RcHm_v2.0_Chr6g0253051 Rosa chinensis HOM05D005520 ORTHO05D006633 3.0e-12 75.9 70 60.0
SalBow6G1186 Salvia bowleyana HOM05D005520 ORTHO05D006633 3.0e-12 75.9 145 40.0
PGSC0003DMG400002983 Solanum tuberosum HOM05D005520 ORTHO05D006633 5.1e-12 75.1 52 69.2
Glyma.13G199600 Glycine max HOM05D005520 ORTHO05D006633 8.8e-12 74.3 115 44.3
SGA_v2.0_scaffold225G43026 Striga asiatica HOM05D005520 ORTHO05D006633 1.1e-11 73.9 40 82.5
TAR625G0105 Trochodendron aralioides HOM05D000641 ORTHO05D006633 4.3e-11 72.0 42 76.2
HPP92_023672 Vanilla planifolia HOM05D005520 ORTHO05D006633 7.4e-11 71.2 122 32.0
CDE07G0521 Ceratophyllum demersum HOM05D005520 ORTHO05D006633 9.7e-11 70.9 65 55.4
ECA240G0181 Erigeron canadensis HOM05D005520 ORTHO05D006633 1.7e-10 70.1 40 75.0
Pp3c2_36820 Physcomitrium patens HOM05D005520 ORTHO05D006633 1.7e-10 70.1 48 70.8
RcHm_v2.0_Chr6g0253221 Rosa chinensis HOM05D005520 ORTHO05D006633 1.7e-10 70.1 70 57.1
SMO172G0176 Selaginella moellendorffii HOM05D005520 ORTHO05D006633 1.7e-10 70.1 38 81.6
HPP92_023689 Vanilla planifolia HOM05D005520 ORTHO05D006633 2.2e-10 69.7 122 31.1
Migut.B00427 Erythranthe guttata HOM05D005520 ORTHO05D006633 3.7e-10 68.9 38 81.6
RhsimUnG0125400 Rhododendron simsii HOM05D005520 ORTHO05D006633 4.8e-10 68.6 101 44.6
Aa31LG10G4210 Aethionema arabicum HOM05D001821 ORTHO05D006633 1.4e-09 67.0 88 40.9
AUR62022505 Chenopodium quinoa HOM05D005520 ORTHO05D006633 1.4e-09 67.0 93 43.0
Mapoly0036s0053 Marchantia polymorpha HOM05D005520 ORTHO05D006633 1.8e-09 66.6 82 42.7
Os03g0206300 Oryza sativa ssp. japonica HOM05D005520 ORTHO05D006633 5.3e-09 65.1 40 67.5
TPR.G17607 Trifolium pratense HOM05D005520 ORTHO05D006633 5.3e-09 65.1 95 42.1
Ca_24141_v3 Cicer arietinum L. HOM05D005520 ORTHO05D006633 9.1e-09 64.3 96 41.7
Pp3c19_18310 Physcomitrium patens HOM05D005520 ORTHO05D006633 9.1e-09 64.3 48 64.6
Zm00001eb007440 Zea mays HOM05D005520 ORTHO05D006633 1.5e-08 63.5 39 66.7
Cc02_g19680 Coffea canephora HOM05D005520 ORTHO05D006633 3.4e-08 62.4 180 32.2
SEGI_34662 Sequoiadendron giganteum HOM05D005520 ORTHO05D006633 5.9e-08 61.6 42 61.9
MCO01G292 Micromonas commoda HOM05D005520 ORTHO05D006633 1.1e-06 57.4 58 46.6
Cre03.g173200 Chlamydomonas reinhardtii HOM05D005520 ORTHO05D006633 7.2e-06 54.7 35 62.9
Haze_26784 Corylus avellana HOM05D005520 ORTHO05D006633 7.2e-06 54.7 38 52.6
CBR_g2851 Chara braunii HOM05D005520 ORTHO05D006633 9.4e-06 54.3 37 59.5


User provided reference genes

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