Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C017958.2 Cucumis melo HOM05D002674 ORTHO05D007700 2.1e-149 532.3 267 100.0
CsaV3_4G000780 Cucumis sativus L. HOM05D002674 ORTHO05D007700 6.1e-149 530.8 267 99.3
ClCG10G010900 Citrullus lanatus HOM05D002674 ORTHO05D007700 6.5e-135 484.2 271 92.3
Sed0013149 Sechium edule HOM05D002674 ORTHO05D007700 2.1e-101 372.9 261 79.3
CANSAT25G1821 Cannabis sativa HOM05D002674 ORTHO05D007700 9.8e-99 364.0 275 71.3
Prupe.8G261000 Prunus persica HOM05D002674 ORTHO05D007700 1.9e-97 359.8 288 69.1
Atru.chr5.1151 Acer truncatum HOM05D002674 ORTHO05D007700 7.8e-96 354.4 277 70.4
FAN27G2781 Fragaria x ananassa HOM05D002674 ORTHO05D007700 2.5e-94 349.4 281 69.4
MD03G1287800 Malus domestica HOM05D002674 ORTHO05D007700 9.5e-94 347.4 284 66.2
Ciclev10021537m.g Citrus clementina HOM05D002674 ORTHO05D007700 2.8e-93 345.9 288 68.1
Thecc.01G299900 Theobroma cacao HOM05D002674 ORTHO05D007700 3.1e-92 342.4 284 68.3
MD11G1310500 Malus domestica HOM05D002674 ORTHO05D007700 5.2e-92 341.7 278 66.9
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 4.4e-91 338.6 283 67.8
COL.COLO4_23350 Corchorus olitorius HOM05D002674 ORTHO05D007700 1.7e-90 336.7 279 67.4
TWI23G1032 Tripterygium wilfordii HOM05D002674 ORTHO05D007700 1.4e-89 333.6 264 71.2
Duzib138G1545 Durio zibethinus HOM05D002674 ORTHO05D007700 2.4e-89 332.8 281 66.5
Gohir.D08G085300 Gossypium hirsutum HOM05D002674 ORTHO05D007700 2.7e-88 329.3 281 66.5
Gorai.004G089800 Gossypium raimondii HOM05D002674 ORTHO05D007700 3.5e-88 328.9 279 66.7
Gohir.A08G075900 Gossypium hirsutum HOM05D002674 ORTHO05D007700 7.8e-88 327.8 278 66.5
Glyma.02G018300 Glycine max HOM05D002674 ORTHO05D007700 5.1e-87 325.1 277 67.1
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 1.5e-86 323.6 281 66.2
Manes.01G218600 Manihot esculenta HOM05D002674 ORTHO05D007700 1.5e-86 323.6 283 66.4
TAR365G1234 Trochodendron aralioides HOM05D002674 ORTHO05D007700 1.2e-85 320.5 271 64.9
QL12p028514 Quercus lobata HOM05D002674 ORTHO05D007700 4.7e-85 318.5 301 61.5
Potri.014G129500 Populus trichocarpa HOM05D002674 ORTHO05D007700 8.1e-85 317.8 277 66.8
Cfa005916 Carpinus fangiana HOM05D002674 ORTHO05D007700 1.8e-84 316.6 283 64.7
CiPaw.07G108400 Carya illinoinensis HOM05D002674 ORTHO05D007700 6.8e-84 314.7 280 63.9
Glyma.10G018600 Glycine max HOM05D002674 ORTHO05D007700 1.3e-82 310.5 285 63.2
Sabra14G0096100 Salix brachista HOM05D002674 ORTHO05D007700 1.7e-82 310.1 278 66.2
Phvul.007G146100 Phaseolus vulgaris HOM05D002674 ORTHO05D007700 2.9e-82 309.3 279 64.9
RcHm_v2.0_Chr6g0293961 Rosa chinensis HOM05D002674 ORTHO05D007700 8.4e-82 307.8 285 62.1
FAN20G3185 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.1e-81 307.4 287 62.7
FAN24G1157 Fragaria x ananassa HOM05D002674 ORTHO05D007700 4.2e-81 305.4 287 62.4
Lj1A25T5 Lonicera japonica HOM05D002674 ORTHO05D007700 5.4e-81 305.1 279 65.6
Psat6g166040 Pisum sativum HOM05D002674 ORTHO05D007700 1.6e-80 303.5 276 64.1
Actinidia24347 Actinidia chinensis HOM05D002674 ORTHO05D007700 2.7e-80 302.8 280 63.6
FvH4_2g25690 Fragaria vesca HOM05D002674 ORTHO05D007700 6.0e-80 301.6 287 62.0
FAN15G1012 Fragaria x ananassa HOM05D002674 ORTHO05D007700 6.0e-80 301.6 287 61.7
Lj5g0010238 Lotus japonicus HOM05D002674 ORTHO05D007700 7.8e-80 301.2 282 64.5
Potri.002G204700 Populus trichocarpa HOM05D002674 ORTHO05D007700 7.8e-80 301.2 279 65.2
Eucgr.K03478 Eucalyptus grandis HOM05D002674 ORTHO05D007700 5.6e-78 295.0 285 60.4
Ca_10339_v3 Cicer arietinum L. HOM05D002674 ORTHO05D007700 2.4e-76 289.7 270 62.6
Aqoxy5G00752 Aquilegia oxysepala HOM05D002674 ORTHO05D007700 6.9e-76 288.1 283 59.7
Rhsim01G0243300 Rhododendron simsii HOM05D002674 ORTHO05D007700 1.2e-75 287.3 291 62.9
Cc01_g20810 Coffea canephora HOM05D002674 ORTHO05D007700 3.4e-75 285.8 281 59.8
TAR636G1278 Trochodendron aralioides HOM05D002674 ORTHO05D007700 3.4e-75 285.8 285 58.2
Medtr1g088580 Medicago truncatula HOM05D002674 ORTHO05D007700 2.9e-74 282.7 276 60.5
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 5.4e-73 278.5 282 62.1
MBI19_g25354_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D007700 7.1e-73 278.1 293 56.3
CSS0049735 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 7.9e-72 274.6 284 59.9
TPR.G34010 Trifolium pratense HOM05D002674 ORTHO05D007700 1.1e-70 270.8 274 58.4
HanXRQChr10g0284651 Helianthus annuus HOM05D002674 ORTHO05D007700 4.8e-69 265.4 299 54.8
CSS0000533 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 8.1e-69 264.6 274 59.1
PGSC0003DMG402017938 Solanum tuberosum HOM05D002674 ORTHO05D007700 4.0e-68 262.3 275 56.0
EL10Ac7g17509 Beta vulgaris HOM05D002674 ORTHO05D007700 5.3e-68 261.9 299 56.9
Sopen06g003880 Solanum pennellii HOM05D002674 ORTHO05D007700 6.9e-68 261.5 275 56.4
Sp6g02330 Schrenkiella parvula HOM05D002674 ORTHO05D007700 9.0e-68 261.2 282 57.1
Solyc06g009120.3 Solanum lycopersicum HOM05D002674 ORTHO05D007700 2.0e-67 260.0 275 56.0
Nitab4.5_0002470g0100 Nicotiana tabacum HOM05D002674 ORTHO05D007700 3.4e-67 259.2 283 55.1
C02p38980 Brassica napus HOM05D002674 ORTHO05D007700 7.6e-67 258.1 277 58.1
THA.LOC104815928 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 7.6e-67 258.1 276 56.9
BolC2t09909H Brassica oleracea HOM05D002674 ORTHO05D007700 1.3e-66 257.3 277 58.1
Sc24g0003790 Simmondsia chinensis HOM05D002674 ORTHO05D007700 1.7e-66 256.9 287 57.5
VMungo0720G0138 Vigna mungo HOM05D002674 ORTHO05D007700 3.8e-66 255.8 244 60.2
AT4G02425 Arabidopsis thaliana HOM05D002674 ORTHO05D007700 8.4e-66 254.6 279 56.6
BcaC03g16124 Brassica carinata HOM05D002674 ORTHO05D007700 1.9e-65 253.4 277 57.4
CARHR250690 Cardamine hirsuta HOM05D002674 ORTHO05D007700 1.9e-65 253.4 282 55.3
Ah.15g093240 Amaranthus hybridus HOM05D002674 ORTHO05D007700 2.4e-65 253.1 294 53.7
Thhalv10028893m.g Eutrema salsugineum HOM05D002674 ORTHO05D007700 2.4e-65 253.1 279 56.3
Carub.0006s3472 Capsella rubella HOM05D002674 ORTHO05D007700 7.1e-65 251.5 279 55.9
HPP92_025205 Vanilla planifolia HOM05D002674 ORTHO05D007700 7.1e-65 251.5 274 56.9
A02p24720 Brassica napus HOM05D002674 ORTHO05D007700 2.1e-64 250.0 277 56.3
BraA02t07459Z Brassica rapa HOM05D002674 ORTHO05D007700 2.7e-64 249.6 277 56.7
Lsat_1_v5_gn_9_5620 Lactuca sativa HOM05D002674 ORTHO05D007700 3.9e-63 245.7 270 56.7
PSO832G4034 Papaver somniferum HOM05D002674 ORTHO05D007700 5.1e-63 245.4 288 54.9
Migut.D00215 Erythranthe guttata HOM05D002674 ORTHO05D007700 6.7e-63 245.0 273 58.2
Nitab4.5_0005805g0020 Nicotiana tabacum HOM05D002674 ORTHO05D007700 8.7e-63 244.6 278 54.0
Nn3g21481 Nelumbo nucifera HOM05D002674 ORTHO05D007700 2.5e-62 243.0 247 59.1
Hund18157 Selenicereus undatus HOM05D002674 ORTHO05D007700 4.3e-62 242.3 284 54.9
SGA_v2.0_scaffold1G00369 Striga asiatica HOM05D002674 ORTHO05D007700 1.4e-60 237.3 278 55.8
Lalb_Chr06g0163511 Lupinus albus HOM05D002674 ORTHO05D007700 4.0e-60 235.7 276 55.1
THA.LOC104825970 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 4.0e-60 235.7 289 53.6
Hma1.2p1_0491F.1_g164500 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 5.3e-60 235.3 198 68.7
CDE11G0633 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 1.3e-58 230.7 269 53.9
Lsat_1_v5_gn_7_11800 Lactuca sativa HOM05D002674 ORTHO05D007700 5.5e-57 225.3 249 56.2
CDE05G2513 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 7.1e-57 224.9 269 52.0
Peaxi162Scf00399g00714 Petunia axillaris HOM05D002674 ORTHO05D007700 1.2e-56 224.2 307 49.8
AL6G50650 Arabidopsis lyrata HOM05D002674 ORTHO05D007700 5.1e-55 218.8 239 57.3
Aa31LG1G9740 Aethionema arabicum HOM05D002674 ORTHO05D007700 1.9e-54 216.9 280 51.1
BcaB05g23628 Brassica carinata HOM05D002674 ORTHO05D007700 2.0e-51 206.8 220 60.0
vmacro15007 Vaccinium macrocarpon HOM05D002674 ORTHO05D007700 3.4e-51 206.1 251 53.8
arahy.Tifrunner.gnm1.ann1.2P60TQ Arachis hypogaea HOM05D002674 ORTHO05D007700 1.6e-48 197.2 255 51.4
Carub.0001s0195 Capsella rubella HOM05D002674 ORTHO05D007700 2.1e-48 196.8 267 53.9
DCAR_002828 Daucus carota HOM05D002674 ORTHO05D007700 2.1e-48 196.8 260 53.5
AUR62033139 Chenopodium quinoa HOM05D002674 ORTHO05D007700 3.3e-46 189.5 210 57.1
arahy.Tifrunner.gnm1.ann1.YN8C8B Arachis hypogaea HOM05D002674 ORTHO05D007700 2.8e-45 186.4 254 50.0
ECA247G3124 Erigeron canadensis HOM05D002674 ORTHO05D007700 4.8e-45 185.7 291 46.0
Oeu054122.1 Olea europaea HOM05D002674 ORTHO05D007700 6.9e-44 181.8 165 68.5
unitig_22.g5241 Utricularia gibba HOM05D002674 ORTHO05D007700 1.0e-42 177.9 229 53.7
SEGI_12569 Sequoiadendron giganteum HOM05D002674 ORTHO05D007700 1.1e-41 174.5 344 40.1
ATR0796G100 Amborella trichopoda HOM05D002674 ORTHO05D007700 4.2e-41 172.6 277 45.1
AUR62008632 Chenopodium quinoa HOM05D002674 ORTHO05D007700 9.4e-41 171.4 171 60.2
Aa31LG5G2060 Aethionema arabicum HOM05D002674 ORTHO05D007700 1.2e-40 171.0 248 48.0
Oeu053149.1 Olea europaea HOM05D002674 ORTHO05D007700 9.1e-36 154.8 168 60.1
CAN.G1280.1 Capsicum annuum HOM05D002674 ORTHO05D007700 2.6e-35 153.3 246 42.3
HPP92_006921 Vanilla planifolia HOM05D002674 ORTHO05D007700 2.3e-31 140.2 233 43.8
Zm00001eb127170 Zea mays HOM05D002674 ORTHO05D007700 6.3e-29 132.1 244 43.0
Hma1.2p1_0491F.1_g164510 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 3.1e-28 129.8 109 71.6
Os01g0316500 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D007700 7.0e-28 128.6 182 50.0
CANSAT56G3445 Cannabis sativa HOM05D002674 ORTHO05D007700 9.4e-25 118.2 93 65.6
Zm00001eb285590 Zea mays HOM05D002674 ORTHO05D007700 4.7e-24 115.9 241 40.7
BolC6t36475H Brassica oleracea HOM05D000186 ORTHO05D015008 3.2e-17 93.2 86 59.3
BcaC03g16430 Brassica carinata HOM05D002674 ORTHO05D007700 1.8e-15 87.4 74 62.2
Zm00001eb018450 Zea mays HOM05D002674 ORTHO05D007700 1.8e-15 87.4 210 40.0
BcaB07g32361 Brassica carinata HOM05D002674 ORTHO05D007700 3.5e-11 73.2 82 57.3
C05p48610 Brassica napus HOM05D002674 ORTHO05D007700 7.7e-11 72.0 91 49.5
C08p25960 Brassica napus HOM05D002674 ORTHO05D007700 7.7e-11 72.0 91 49.5
C02p62500 Brassica napus HOM05D002674 ORTHO05D007700 2.2e-10 70.5 80 50.0
BolC1t01853H Brassica oleracea HOM05D002674 ORTHO05D007700 5.0e-10 69.3 89 48.3
C02p42550 Brassica napus HOM05D000186 ORTHO05D015008 8.5e-10 68.6 41 75.6
C06p13190 Brassica napus HOM05D002674 ORTHO05D015008 3.2e-09 66.6 41 73.2
VMungo0720G2130 Vigna mungo HOM05D002674 ORTHO05D007700 4.2e-09 66.2 35 80.0
Haze_04933 Corylus avellana HOM05D002674 ORTHO05D007700 5.5e-09 65.9 35 77.1
BolC9t55650H Brassica oleracea HOM05D002674 ORTHO05D007700 7.2e-09 65.5 67 55.2
BcaB04g18179 Brassica carinata HOM05D002674 ORTHO05D007700 9.4e-09 65.1 38 76.3
A08p09760 Brassica napus HOM05D002674 ORTHO05D007700 1.2e-08 64.7 53 60.4
BraA08t32971Z Brassica rapa HOM05D002674 ORTHO05D007700 1.2e-08 64.7 53 60.4
A09p66240 Brassica napus HOM05D002674 ORTHO05D007700 4.7e-08 62.8 37 75.7
C09p27860 Brassica napus HOM05D002674 ORTHO05D007700 6.1e-08 62.4 66 54.5
BcaB06g28993 Brassica carinata HOM05D002674 ORTHO05D007700 1.0e-07 61.6 37 75.7
Rhsim01G0284900 Rhododendron simsii HOM05D000113 ORTHO05D008110 4.4e-06 56.2 43 62.8


User provided reference genes

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