Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C017681.2 Cucumis melo HOM05D009134 ORTHO05D011284 1.2e-55 219.5 108 100.0
CsaV3_4G003740 Cucumis sativus L. HOM05D009134 ORTHO05D011284 1.4e-51 206.1 108 91.7
ClCG07G016620 Citrullus lanatus HOM05D009134 ORTHO05D011284 2.6e-42 175.3 104 80.8
Sed0000595 Sechium edule HOM05D009134 ORTHO05D011284 2.9e-33 145.2 101 70.3
QL10p050513 Quercus lobata HOM05D009134 ORTHO05D011284 2.6e-18 95.5 92 48.9
Thecc.04G176100 Theobroma cacao HOM05D009134 ORTHO05D011284 6.5e-17 90.9 97 42.3
TPR.G34196 Trifolium pratense HOM05D009134 ORTHO05D011284 1.9e-16 89.4 87 51.7
Cfa021324 Carpinus fangiana HOM05D009134 ORTHO05D011284 5.5e-16 87.8 99 47.5
CiPaw.01G097900 Carya illinoinensis HOM05D009134 ORTHO05D011284 7.2e-16 87.4 101 46.5
Haze_01470 Corylus avellana HOM05D009134 ORTHO05D011284 1.6e-15 86.3 92 47.8
Psat7g209480 Pisum sativum HOM05D009134 ORTHO05D011284 2.1e-15 85.9 99 46.5
arahy.Tifrunner.gnm1.ann1.UEU2AI Arachis hypogaea HOM05D009134 ORTHO05D011284 2.7e-15 85.5 99 40.4
Lalb_Chr19g0138361 Lupinus albus HOM05D009134 ORTHO05D011284 4.7e-15 84.7 100 41.0
COL.COLO4_08224 Corchorus olitorius HOM05D009134 ORTHO05D011284 8.0e-15 84.0 99 41.4
Medtr4g067330 Medicago truncatula HOM05D009134 ORTHO05D011284 5.2e-14 81.3 98 44.9
Atru.chr4.1244 Acer truncatum HOM05D009134 ORTHO05D011284 6.7e-14 80.9 90 46.7
TWI15G0033 Tripterygium wilfordii HOM05D009134 ORTHO05D011284 2.6e-13 79.0 97 44.3
PGR083G0717 Punica granatum HOM05D009134 ORTHO05D011284 3.3e-13 78.6 87 42.5
Manes.11G122300 Manihot esculenta HOM05D009134 ORTHO05D011284 9.7e-13 77.0 98 38.8
Lj3g0025332 Lotus japonicus HOM05D000452 ORTHO05D000647 2.2e-12 75.9 87 44.8
Rhsim09G0024400 Rhododendron simsii HOM05D009134 ORTHO05D011284 3.7e-12 75.1 95 42.1
CSS0032604 Camellia sinensis var. sinensis HOM05D009134 ORTHO05D011284 6.3e-12 74.3 83 45.8
arahy.Tifrunner.gnm1.ann1.9K6AGR Arachis hypogaea HOM05D009134 ORTHO05D011284 5.3e-11 71.2 97 39.2
vmacro00641 Vaccinium macrocarpon HOM05D009134 ORTHO05D011284 9.1e-11 70.5 80 47.5
Eucgr.A00098 Eucalyptus grandis HOM05D009134 ORTHO05D011284 2.0e-10 69.3 111 39.6
Potri.007G130200 Populus trichocarpa HOM05D009134 ORTHO05D011284 2.0e-10 69.3 102 33.3
Glyma.15G029500 Glycine max HOM05D000578 ORTHO05D000422 3.5e-10 68.6 101 37.6
Glyma.13G344800 Glycine max HOM05D009134 ORTHO05D011284 7.7e-10 67.4 92 39.1
VMungo1080G0302 Vigna mungo HOM05D009134 ORTHO05D011284 3.6e-07 58.5 93 37.6
Nn1g09711 Nelumbo nucifera HOM05D009134 ORTHO05D011284 8.0e-07 57.4 90 42.2
Nn7g37605 Nelumbo nucifera HOM05D009134 ORTHO05D011284 1.8e-06 56.2 91 42.9
TAR365G1039 Trochodendron aralioides HOM05D009134 ORTHO05D011284 6.7e-06 54.3 85 38.8
TAR365G0166 Trochodendron aralioides HOM05D009134 ORTHO05D011284 8.8e-06 53.9 85 37.6


User provided reference genes

Program Settings