Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C017459.2 Cucumis melo HOM05D015664 ORTHO05D008524 1.6e-98 362.8 192 100.0
CsaV3_1G031630 Cucumis sativus L. HOM05D015664 ORTHO05D008524 2.1e-79 299.3 192 84.4
ClCG06G013380 Citrullus lanatus HOM05D015664 ORTHO05D008524 6.9e-70 267.7 189 81.0
Sed0025640 Sechium edule HOM05D015664 ORTHO05D008524 2.1e-42 176.4 192 59.9
Sed0007534 Sechium edule HOM05D015664 ORTHO05D008524 3.1e-38 162.5 197 57.9
Atru.chr7.610 Acer truncatum HOM05D015664 ORTHO05D008524 7.3e-11 71.6 55 56.4
Hma1.2p1_0900F.1_g234550 Hydrangea macrophylla HOM05D007262 ORTHO05D008524 7.3e-11 71.6 162 35.8
CiPaw.07G192600 Carya illinoinensis HOM05D007262 ORTHO05D008524 2.1e-10 70.1 104 41.3
Sc08g0005310 Simmondsia chinensis HOM05D007262 ORTHO05D008524 1.8e-09 67.0 151 33.8
TAR383G0997 Trochodendron aralioides HOM05D007262 ORTHO05D008524 2.3e-09 66.6 114 39.5
Potri.006G167300 Populus trichocarpa HOM05D007262 ORTHO05D008524 5.2e-09 65.5 104 39.4
Cfa013501 Carpinus fangiana HOM05D007262 ORTHO05D008524 6.8e-09 65.1 160 35.0
CiPaw.08G035900 Carya illinoinensis HOM05D007262 ORTHO05D008524 8.9e-09 64.7 155 38.1
CiPaw.08G035800 Carya illinoinensis HOM05D007262 ORTHO05D008524 1.2e-08 64.3 193 37.8
Potri.018G091900 Populus trichocarpa HOM05D007262 ORTHO05D008524 1.5e-08 63.9 75 44.0
Prupe.1G085100 Prunus persica HOM05D015664 ORTHO05D008524 1.5e-08 63.9 208 31.2
Sabra06G0129200 Salix brachista HOM05D007262 ORTHO05D008524 1.5e-08 63.9 113 36.3
COL.COLO4_28647 Corchorus olitorius HOM05D015664 ORTHO05D008524 2.0e-08 63.5 151 33.1
Hma1.2p1_1025F.1_g249350 Hydrangea macrophylla HOM05D007262 ORTHO05D008524 3.4e-08 62.8 167 32.3
Thecc.09G176700 Theobroma cacao HOM05D018436 ORTHO05D025173 7.5e-08 61.6 150 36.0
Dinv41243 Davidia involucrata HOM05D007262 ORTHO05D008524 1.7e-07 60.5 93 40.9
Haze_22091 Corylus avellana HOM05D007262 ORTHO05D008524 2.2e-07 60.1 140 37.9
Gohir.D13G216200 Gossypium hirsutum HOM05D007262 ORTHO05D008524 2.2e-07 60.1 100 39.0
Nitab4.5_0012916g0010 Nicotiana tabacum HOM05D007262 ORTHO05D008524 2.9e-07 59.7 94 40.4
Prupe.1G085200 Prunus persica HOM05D007262 ORTHO05D008524 2.9e-07 59.7 141 34.0
Atru.chr7.612 Acer truncatum HOM05D007262 ORTHO05D008524 4.9e-07 58.9 95 37.9
Ciclev10010707m.g Citrus clementina HOM05D007262 ORTHO05D008524 6.4e-07 58.5 144 32.6
CSS0001479 Camellia sinensis var. sinensis HOM05D007262 ORTHO05D008524 1.1e-06 57.8 127 34.6
COL.COLO4_37718 Corchorus olitorius HOM05D018436 ORTHO05D008524 1.1e-06 57.8 87 40.2
Sabra18G0079000 Salix brachista HOM05D007262 ORTHO05D008524 1.4e-06 57.4 114 32.5
Nn8g40468 Nelumbo nucifera HOM05D007262 ORTHO05D008524 1.9e-06 57.0 171 33.3
Ciclev10009553m.g Citrus clementina HOM05D007262 ORTHO05D008524 2.4e-06 56.6 198 28.3
Thecc.09G176800 Theobroma cacao HOM05D007262 ORTHO05D008524 2.4e-06 56.6 156 33.3
Lsat_1_v5_gn_7_54640 Lactuca sativa HOM05D007262 ORTHO05D008524 3.2e-06 56.2 100 35.0
Nitab4.5_0007075g0010 Nicotiana tabacum HOM05D007262 ORTHO05D008524 3.2e-06 56.2 93 38.7
Duzib128G1044 Durio zibethinus HOM05D015664 ORTHO05D008524 4.1e-06 55.8 98 37.8
FAN02G0282 Fragaria x ananassa HOM05D002277 ORTHO05D001770 7.0e-06 55.1 82 39.0
Nn2g13334 Nelumbo nucifera HOM05D002277 ORTHO05D001770 7.0e-06 55.1 89 37.1
Ca_21230_v3 Cicer arietinum L. HOM05D007262 ORTHO05D008524 9.2e-06 54.7 91 37.4
Gorai.013G246500 Gossypium raimondii HOM05D007262 ORTHO05D008524 9.2e-06 54.7 138 33.3


User provided reference genes

Program Settings