Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C017430.2 Cucumis melo HOM05D004945 ORTHO05D005536 1.3e-45 186.0 91 100.0
CsaV3_1G031860 Cucumis sativus L. HOM05D004945 ORTHO05D005536 2.6e-43 178.3 91 95.6
ClCG06G013580 Citrullus lanatus HOM05D004945 ORTHO05D005536 9.9e-43 176.4 91 93.4
Sed0015624 Sechium edule HOM05D004945 ORTHO05D005536 8.4e-42 173.3 91 91.2
Sed0005101 Sechium edule HOM05D004945 ORTHO05D005536 2.4e-41 171.8 91 90.1
Prupe.1G075600 Prunus persica HOM05D004945 ORTHO05D005536 1.3e-39 166.0 88 86.4
Cpa.g.sc95.12 Carica papaya HOM05D004945 ORTHO05D005536 2.3e-39 165.2 91 85.7
PGR142G1282 Punica granatum HOM05D004945 ORTHO05D005536 6.7e-39 163.7 91 83.5
COL.COLO4_22793 Corchorus olitorius HOM05D004945 ORTHO05D005536 3.3e-38 161.4 91 80.2
TAR625G1304 Trochodendron aralioides HOM05D004945 ORTHO05D005536 4.3e-38 161.0 91 79.1
Actinidia38805 Actinidia chinensis HOM05D004945 ORTHO05D005536 5.6e-38 160.6 91 80.2
COL.COLO4_08559 Corchorus olitorius HOM05D004945 ORTHO05D005536 5.6e-38 160.6 91 80.2
MD13G1241900 Malus domestica HOM05D004945 ORTHO05D005536 9.6e-38 159.8 88 83.0
MD07G1027600 Malus domestica HOM05D004945 ORTHO05D005536 2.1e-37 158.7 88 83.0
Thecc.09G185900 Theobroma cacao HOM05D004945 ORTHO05D005536 2.8e-37 158.3 91 81.3
QL11p013920 Quercus lobata HOM05D004945 ORTHO05D005536 3.7e-37 157.9 90 80.0
QL11p014429 Quercus lobata HOM05D004945 ORTHO05D005536 4.8e-37 157.5 90 78.9
CiPaw.09G075900 Carya illinoinensis HOM05D004945 ORTHO05D005536 6.2e-37 157.1 88 81.8
Hma1.2p1_0517F.1_g170730 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 8.1e-37 156.8 91 80.2
Potri.018G142500 Populus trichocarpa HOM05D004945 ORTHO05D005536 8.1e-37 156.8 91 80.2
Manes.06G020000 Manihot esculenta HOM05D004945 ORTHO05D005536 1.8e-36 155.6 88 80.7
Potri.006G075600 Populus trichocarpa HOM05D004945 ORTHO05D005536 1.8e-36 155.6 91 75.8
TAR636G3350 Trochodendron aralioides HOM05D004945 ORTHO05D005536 2.4e-36 155.2 91 75.8
CiPaw.10G063900 Carya illinoinensis HOM05D004945 ORTHO05D005536 4.0e-36 154.5 93 79.6
CSS0028266 Camellia sinensis var. sinensis HOM05D004945 ORTHO05D005536 5.3e-36 154.1 91 75.8
Duzib150G1578 Durio zibethinus HOM05D004945 ORTHO05D005536 5.3e-36 154.1 91 78.0
Duzib150G0603 Durio zibethinus HOM05D004945 ORTHO05D005536 6.9e-36 153.7 91 76.9
Rhsim08G0249700 Rhododendron simsii HOM05D004945 ORTHO05D005536 9.0e-36 153.3 90 81.1
Aqoxy1G01195 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 1.2e-35 152.9 91 78.0
RcHm_v2.0_Chr4g0399651 Rosa chinensis HOM05D004945 ORTHO05D005536 2.6e-35 151.8 88 80.7
TWI63G0641 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 3.4e-35 151.4 89 75.3
THA.LOC104803956 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 5.8e-35 150.6 91 78.0
THA.LOC104803979 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 5.8e-35 150.6 91 78.0
Gohir.D08G028100 Gossypium hirsutum HOM05D004945 ORTHO05D005536 9.9e-35 149.8 91 75.8
CANSAT11G0762 Cannabis sativa HOM05D004945 ORTHO05D005536 1.3e-34 149.4 88 79.5
TWI34G0510 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 1.3e-34 149.4 89 75.3
Atru.chr7.757 Acer truncatum HOM05D004945 ORTHO05D005536 1.7e-34 149.1 87 79.3
Atru.chr7.779 Acer truncatum HOM05D004945 ORTHO05D005536 1.7e-34 149.1 87 79.3
Haze_06091 Corylus avellana HOM05D004945 ORTHO05D005536 1.7e-34 149.1 93 76.3
Sabra18G0116400 Salix brachista HOM05D004945 ORTHO05D005536 1.7e-34 149.1 88 77.3
THA.LOC104820006 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 1.7e-34 149.1 91 76.9
Ciclev10010043m.g Citrus clementina HOM05D004945 ORTHO05D005536 2.2e-34 148.7 88 75.0
FvH4_4g07310 Fragaria vesca HOM05D004945 ORTHO05D005536 3.8e-34 147.9 88 76.1
Gorai.004G025200 Gossypium raimondii HOM05D004945 ORTHO05D005536 3.8e-34 147.9 91 74.7
Gohir.A13G208500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 8.4e-34 146.7 91 71.4
Gohir.D13G212800 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.1e-33 146.4 91 73.6
Gorai.013G243200 Gossypium raimondii HOM05D004945 ORTHO05D005536 1.1e-33 146.4 91 73.6
BcaC01g01207 Brassica carinata HOM05D004945 ORTHO05D005536 1.4e-33 146.0 91 73.6
A08p19460 Brassica napus HOM05D004945 ORTHO05D005536 1.4e-33 146.0 91 73.6
C03p88960 Brassica napus HOM05D004945 ORTHO05D005536 1.4e-33 146.0 91 73.6
BolC3t21206H Brassica oleracea HOM05D004945 ORTHO05D005536 1.4e-33 146.0 91 73.6
BraA08t33908Z Brassica rapa HOM05D004945 ORTHO05D005536 1.4e-33 146.0 91 73.6
Gohir.D13G212900 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.9e-33 145.6 91 70.3
Eucgr.C00118 Eucalyptus grandis HOM05D004945 ORTHO05D005536 2.4e-33 145.2 89 73.0
DCAR_007670 Daucus carota HOM05D004945 ORTHO05D005536 3.2e-33 144.8 91 75.8
FAN07G0945 Fragaria x ananassa HOM05D004945 ORTHO05D005536 3.2e-33 144.8 88 75.0
Gohir.A08G017500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 3.2e-33 144.8 91 74.7
Gohir.A13G208400 Gossypium hirsutum HOM05D004945 ORTHO05D005536 3.2e-33 144.8 91 72.5
Aqoxy7G02794 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 4.2e-33 144.4 92 76.1
BcaB03g12628 Brassica carinata HOM05D004945 ORTHO05D005536 4.2e-33 144.4 91 72.5
ATR0626G412 Amborella trichopoda HOM05D004945 ORTHO05D005536 9.3e-33 143.3 90 74.4
QL11p013931 Quercus lobata HOM05D004945 ORTHO05D005536 1.2e-32 142.9 90 74.4
CAN.G308.14 Capsicum annuum HOM05D004945 ORTHO05D005536 1.6e-32 142.5 91 73.6
Lsat_1_v5_gn_1_39460 Lactuca sativa HOM05D004945 ORTHO05D005536 1.6e-32 142.5 91 70.3
Sp7g27810 Schrenkiella parvula HOM05D004945 ORTHO05D005536 2.1e-32 142.1 91 72.5
Migut.D00890 Erythranthe guttata HOM05D004945 ORTHO05D005536 4.6e-32 141.0 87 71.3
Solyc06g063310.2 Solanum lycopersicum HOM05D004945 ORTHO05D005536 6.0e-32 140.6 91 71.4
Sopen06g022780 Solanum pennellii HOM05D004945 ORTHO05D005536 6.0e-32 140.6 91 71.4
Nitab4.5_0003757g0090 Nicotiana tabacum HOM05D004945 ORTHO05D005536 7.9e-32 140.2 91 71.4
BcaNung00508 Brassica carinata HOM05D004945 ORTHO05D005536 1.0e-31 139.8 91 71.4
CARHR237930 Cardamine hirsuta HOM05D004945 ORTHO05D005536 1.3e-31 139.4 91 71.4
SHI03058 Sapria himalayana HOM05D004945 ORTHO05D005536 1.3e-31 139.4 93 72.0
PGSC0003DMG400026503 Solanum tuberosum HOM05D004945 ORTHO05D005536 1.8e-31 139.0 91 71.4
A03p59370 Brassica napus HOM05D004945 ORTHO05D005536 2.3e-31 138.7 91 71.4
C07p57400 Brassica napus HOM05D004945 ORTHO05D005536 2.3e-31 138.7 91 71.4
BolC7t46209H Brassica oleracea HOM05D004945 ORTHO05D005536 2.3e-31 138.7 91 71.4
BraA03t14994Z Brassica rapa HOM05D004945 ORTHO05D005536 2.3e-31 138.7 91 71.4
Thhalv10026677m.g Eutrema salsugineum HOM05D004945 ORTHO05D005536 2.3e-31 138.7 91 72.5
Hma1.2p1_1111F.1_g258380 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 3.9e-31 137.9 92 75.0
Sc12g0011140 Simmondsia chinensis HOM05D004945 ORTHO05D005536 3.9e-31 137.9 91 73.6
THA.LOC104814658 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 1.1e-30 136.3 91 71.4
Cc04_g00230 Coffea canephora HOM05D004945 ORTHO05D005536 1.5e-30 136.0 87 70.1
QL11p014451 Quercus lobata HOM05D004945 ORTHO05D005536 1.5e-30 136.0 90 71.1
AL7G22230 Arabidopsis lyrata HOM05D004945 ORTHO05D005536 3.3e-30 134.8 91 68.1
AT4G30010 Arabidopsis thaliana HOM05D004945 ORTHO05D005536 4.3e-30 134.4 91 67.0
Carub.0007s1064 Capsella rubella HOM05D004945 ORTHO05D005536 4.3e-30 134.4 91 68.1
Glyma.15G165900 Glycine max HOM05D004945 ORTHO05D005536 7.4e-30 133.7 88 68.2
Migut.I01191 Erythranthe guttata HOM05D004945 ORTHO05D005536 1.3e-29 132.9 91 69.2
Sc15g0001010 Simmondsia chinensis HOM05D004945 ORTHO05D005536 1.3e-29 132.9 89 70.8
Phvul.007G156600 Phaseolus vulgaris HOM05D004945 ORTHO05D005536 2.8e-29 131.7 87 65.5
Ca_02105_v3 Cicer arietinum L. HOM05D004945 ORTHO05D005536 4.8e-29 131.0 87 69.0
Glyma.09G059600 Glycine max HOM05D004945 ORTHO05D005536 8.2e-29 130.2 88 67.0
PSO063G0987 Papaver somniferum HOM05D004945 ORTHO05D005536 2.4e-28 128.6 88 67.0
PSO170G0997 Papaver somniferum HOM05D004945 ORTHO05D005536 2.4e-28 128.6 88 67.0
Aa31LG2G20550 Aethionema arabicum HOM05D004945 ORTHO05D005536 3.1e-28 128.3 88 67.0
CDE04G2745 Ceratophyllum demersum HOM05D004945 ORTHO05D005536 4.0e-28 127.9 82 69.5
unitig_748.g8030 Utricularia gibba HOM05D004945 ORTHO05D005536 2.6e-27 125.2 91 65.9
arahy.Tifrunner.gnm1.ann1.M8DR4H Arachis hypogaea HOM05D004945 ORTHO05D005536 4.5e-27 124.4 91 64.8
arahy.Tifrunner.gnm1.ann1.ZYC9F0 Arachis hypogaea HOM05D004945 ORTHO05D005536 4.5e-27 124.4 91 64.8
Ah.04g153390 Amaranthus hybridus HOM05D004945 ORTHO05D005536 7.6e-27 123.6 88 68.2
MD10G1108200 Malus domestica HOM05D004945 ORTHO05D005536 7.6e-27 123.6 88 68.2
Ah.13g075140 Amaranthus hybridus HOM05D004945 ORTHO05D005536 2.2e-26 122.1 88 67.0
Lalb_Chr11g0074741 Lupinus albus HOM05D004945 ORTHO05D005536 2.2e-26 122.1 89 61.8
THA.LOC104811777 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 2.9e-26 121.7 90 63.3
TPR.G7575 Trifolium pratense HOM05D004945 ORTHO05D005536 2.9e-26 121.7 87 63.2
unitig_32.g11008 Utricularia gibba HOM05D004945 ORTHO05D005536 8.4e-26 120.2 89 61.8
Lj6g0012502 Lotus japonicus HOM05D004945 ORTHO05D005536 1.1e-25 119.8 88 64.8
Medtr2g037990 Medicago truncatula HOM05D004945 ORTHO05D005536 1.9e-25 119.0 87 62.1
Psat1g144160 Pisum sativum HOM05D004945 ORTHO05D005536 2.5e-25 118.6 87 62.1
EL10Ac3g07227 Beta vulgaris HOM05D004945 ORTHO05D005536 5.5e-25 117.5 88 63.6
Psat1g144120 Pisum sativum HOM05D004945 ORTHO05D005536 1.2e-24 116.3 87 63.2
AUR62018340 Chenopodium quinoa HOM05D004945 ORTHO05D005536 2.7e-24 115.2 88 61.4
AUR62044702 Chenopodium quinoa HOM05D004945 ORTHO05D005536 2.7e-24 115.2 88 61.4
AUR62044703 Chenopodium quinoa HOM05D004945 ORTHO05D005536 2.7e-24 115.2 88 61.4
AUR62030327 Chenopodium quinoa HOM05D004945 ORTHO05D005536 3.5e-24 114.8 85 63.5
AUR62031980 Chenopodium quinoa HOM05D004945 ORTHO05D005536 3.5e-24 114.8 82 63.4
ECA247G2100 Erigeron canadensis HOM05D004945 ORTHO05D005536 1.3e-23 112.8 91 60.4
AUR62023991 Chenopodium quinoa HOM05D004945 ORTHO05D005536 3.0e-23 111.7 88 59.1
Dinv25512 Davidia involucrata HOM05D004945 ORTHO05D005536 3.9e-23 111.3 66 75.8
THA.LOC109116878 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 1.5e-22 109.4 60 83.3
A01p08110 Brassica napus HOM05D004945 ORTHO05D005536 8.2e-21 103.6 85 56.5
Os02g0175800 Oryza sativa ssp. japonica HOM05D004945 ORTHO05D005536 1.0e-18 96.7 88 51.1
Nitab4.5_0000617g0120 Nicotiana tabacum HOM05D004945 ORTHO05D005536 2.5e-17 92.0 59 64.4
PGSC0003DMG400028757 Solanum tuberosum HOM05D004945 ORTHO05D005536 4.2e-17 91.3 59 66.1
BcaB03g15243 Brassica carinata HOM05D004945 ORTHO05D005536 7.2e-17 90.5 75 57.3
HanXRQChr15g0497481 Helianthus annuus HOM05D004945 ORTHO05D005536 1.6e-16 89.4 90 51.1
arahy.Tifrunner.gnm1.ann1.2FH55K Arachis hypogaea HOM05D004945 ORTHO05D005536 5.1e-15 84.3 58 63.8
Nitab4.5_0006750g0010 Nicotiana tabacum HOM05D004945 ORTHO05D005536 1.1e-14 83.2 57 61.4
arahy.Tifrunner.gnm1.ann1.U71V3Q Arachis hypogaea HOM05D004945 ORTHO05D005536 2.5e-14 82.0 57 63.2
Oeu001819.1 Olea europaea HOM05D004945 ORTHO05D005536 9.7e-14 80.1 78 52.6
SMO361G0023 Selaginella moellendorffii HOM05D004945 ORTHO05D005536 1.3e-13 79.7 85 41.2
GSVIVG01010862001 Vitis vinifera HOM05D004945 ORTHO05D005536 1.3e-10 69.7 56 58.9
BcaC09g51779 Brassica carinata HOM05D004945 ORTHO05D005536 5.0e-10 67.8 71 46.5
BcaNung06654 Brassica carinata HOM05D004945 ORTHO05D005536 5.0e-10 67.8 71 46.5
Nitab4.5_0002354g0060 Nicotiana tabacum HOM05D004945 ORTHO05D005536 2.5e-09 65.5 45 62.2
AagrBONN_evm.TU.Sc2ySwM_344.4974 Anthoceros agrestis HOM05D004945 ORTHO05D005536 1.6e-08 62.8 82 40.2
Nn8g40786 Nelumbo nucifera HOM05D004945 ORTHO05D005536 2.7e-08 62.0 44 56.8
Mapoly0011s0061 Marchantia polymorpha HOM05D004945 ORTHO05D005536 3.6e-08 61.6 83 37.3
Pp3c5_15650 Physcomitrium patens HOM05D004945 ORTHO05D005536 6.1e-08 60.8 88 37.5
CBR_g50842 Chara braunii HOM05D004945 ORTHO05D005536 5.1e-07 57.8 80 38.8
Dinv24096 Davidia involucrata HOM05D019947 ORTHO05D005536 8.8e-07 57.0 43 58.1
Dinv44937 Davidia involucrata HOM05D004945 ORTHO05D005536 8.8e-07 57.0 43 58.1
MCO09G227 Micromonas commoda HOM05D004945 ORTHO05D005536 1.1e-06 56.6 89 32.6
Pp3c5_15280 Physcomitrium patens HOM05D004945 ORTHO05D005536 1.5e-06 56.2 82 31.7


User provided reference genes

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