Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C017404.2 Cucumis melo HOM05D008207 ORTHO05D010373 2.5e-186 655.2 314 100.0
CsaV3_1G032120 Cucumis sativus L. HOM05D008207 ORTHO05D010373 4.8e-161 571.2 284 95.4
ClCG06G013910 Citrullus lanatus HOM05D008207 ORTHO05D010373 1.5e-151 539.7 318 82.7
Sed0019966 Sechium edule HOM05D008207 ORTHO05D010373 7.1e-149 530.8 289 86.2
CiPaw.07G200900 Carya illinoinensis HOM05D008207 ORTHO05D010373 1.4e-120 436.8 287 70.7
RcHm_v2.0_Chr4g0398551 Rosa chinensis HOM05D008207 ORTHO05D010373 2.2e-118 429.5 281 73.0
FAN17G2040 Fragaria x ananassa HOM05D008207 ORTHO05D010373 5.0e-118 428.3 278 73.0
Glyma.13G103300 Glycine max HOM05D008207 ORTHO05D010373 2.5e-117 426.0 296 68.9
GSVIVG01029258001 Vitis vinifera HOM05D008207 ORTHO05D010373 5.5e-117 424.9 279 73.1
Dinv41210 Davidia involucrata HOM05D008207 ORTHO05D010373 2.3e-115 419.5 283 70.0
VMungo1215G1326 Vigna mungo HOM05D008207 ORTHO05D010373 8.8e-115 417.5 277 71.8
arahy.Tifrunner.gnm1.ann1.PC6R8Z Arachis hypogaea HOM05D008207 ORTHO05D010373 5.7e-114 414.8 274 71.2
TAR625G1057 Trochodendron aralioides HOM05D008207 ORTHO05D010373 2.2e-113 412.9 286 69.9
Phvul.003G137466 Phaseolus vulgaris HOM05D008207 ORTHO05D010373 8.3e-113 411.0 308 66.2
FAN22G1797 Fragaria x ananassa HOM05D008207 ORTHO05D010373 2.4e-112 409.5 296 67.9
arahy.Tifrunner.gnm1.ann1.7T8Q8E Arachis hypogaea HOM05D008207 ORTHO05D010373 3.1e-112 409.1 289 67.8
Hma1.2p1_0235F.1_g099000 Hydrangea macrophylla HOM05D008207 ORTHO05D010373 1.6e-111 406.8 291 68.4
CSS0025795 Camellia sinensis var. sinensis HOM05D008207 ORTHO05D010373 4.5e-111 405.2 276 69.6
Medtr4g126910 Medicago truncatula HOM05D008207 ORTHO05D010373 3.8e-110 402.1 281 70.5
FAN07G0484 Fragaria x ananassa HOM05D008207 ORTHO05D010373 8.5e-110 401.0 278 69.4
Ca_21275_v3 Cicer arietinum L. HOM05D008207 ORTHO05D010373 9.4e-109 397.5 305 65.9
TPR.G5411 Trifolium pratense HOM05D008207 ORTHO05D010373 1.6e-108 396.7 272 70.6
AUR62033242 Chenopodium quinoa HOM05D008207 ORTHO05D010373 6.8e-107 391.3 290 66.9
Aqoxy7G02948 Aquilegia oxysepala HOM05D008207 ORTHO05D010373 4.4e-106 388.7 280 66.1
Lj4g0004064 Lotus japonicus HOM05D008207 ORTHO05D010373 1.7e-105 386.7 278 68.3
Lalb_Chr12g0199751 Lupinus albus HOM05D008207 ORTHO05D010373 3.7e-105 385.6 295 66.4
Prupe.1G068900 Prunus persica HOM05D008207 ORTHO05D010373 8.3e-105 384.4 246 73.2
MBI14_g19451_MAGBIO Magnolia biondii HOM05D008207 ORTHO05D010373 2.7e-103 379.4 281 66.5
Hund26321 Selenicereus undatus HOM05D008207 ORTHO05D010373 4.5e-103 378.6 281 66.5
Sabra12G0024900 Salix brachista HOM05D008207 ORTHO05D010373 7.7e-103 377.9 389 53.5
Eucgr.C00072 Eucalyptus grandis HOM05D008207 ORTHO05D010373 5.6e-101 371.7 259 66.8
FAN12G1624 Fragaria x ananassa HOM05D008207 ORTHO05D000286 5.7e-98 361.7 271 67.2
PSO170G1964 Papaver somniferum HOM05D008207 ORTHO05D010373 1.7e-97 360.1 245 69.4
ATR0580G068 Amborella trichopoda HOM05D008207 ORTHO05D010373 2.9e-97 359.4 281 61.2
AUR62021326 Chenopodium quinoa HOM05D008207 ORTHO05D010373 1.2e-90 337.4 280 61.4
Rhsim01G0002700 Rhododendron simsii HOM05D008207 ORTHO05D010373 4.4e-90 335.5 213 74.2
vmacro13136 Vaccinium macrocarpon HOM05D008207 ORTHO05D010373 2.9e-89 332.8 305 57.4
DCAR_009922 Daucus carota HOM05D008207 ORTHO05D010373 1.7e-86 323.6 226 67.7
Aqoxy5G03535 Aquilegia oxysepala HOM05D008207 ORTHO05D010373 2.8e-84 316.2 249 64.7
EL10Ac8g18310 Beta vulgaris HOM05D008207 ORTHO05D010373 3.6e-84 315.8 254 64.2
Psat4g014640 Pisum sativum HOM05D008207 ORTHO05D010373 1.2e-79 300.8 225 67.1
Pp3c22_15400 Physcomitrium patens HOM05D008207 ORTHO05D010373 1.0e-78 297.7 283 53.7
CDE05G0633 Ceratophyllum demersum HOM05D008207 ORTHO05D010373 7.3e-77 291.6 271 54.2
FvH4_4g06651 Fragaria vesca HOM05D008207 ORTHO05D010373 2.8e-76 289.7 190 72.6
Haze_22076 Corylus avellana HOM05D008207 ORTHO05D010373 1.1e-75 287.7 183 74.3
MD16G1242100 Malus domestica HOM05D008207 ORTHO05D010373 1.4e-67 260.8 246 54.9
Mapoly0010s0073 Marchantia polymorpha HOM05D008207 ORTHO05D010373 2.4e-67 260.0 250 51.2
Eucgr.L03679 Eucalyptus grandis HOM05D008207 ORTHO05D010373 8.7e-54 214.9 169 61.5
Potri.012G036400 Populus trichocarpa HOM05D008207 ORTHO05D010373 3.2e-48 196.4 145 68.3
SMO351G0474 Selaginella moellendorffii HOM05D008207 ORTHO05D010373 3.5e-47 193.0 273 42.5
Actinidia01310 Actinidia chinensis HOM05D008207 ORTHO05D010373 1.2e-42 177.9 122 65.6
Actinidia01309 Actinidia chinensis HOM05D008207 ORTHO05D010373 8.4e-41 171.8 112 72.3
Os02g0462401 Oryza sativa ssp. japonica HOM05D008207 ORTHO05D010373 3.5e-39 166.4 113 67.3
Psat0s6286g0080 Pisum sativum HOM05D008207 ORTHO05D010373 1.6e-28 131.0 95 66.3
Glyma.16G118000 Glycine max HOM05D008207 ORTHO05D010373 8.2e-28 128.6 90 70.0
arahy.Tifrunner.gnm1.ann1.G9LR05 Arachis hypogaea HOM05D008207 ORTHO05D010373 1.1e-27 128.3 94 66.0
MD16G1242000 Malus domestica HOM05D008207 ORTHO05D010373 1.8e-27 127.5 81 70.4
SEGI_04181 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 6.5e-25 119.0 72 72.2
MCO11G473 Micromonas commoda HOM05D008207 ORTHO05D010373 1.9e-24 117.5 280 32.5
SEGI_33506 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 2.0e-21 107.5 116 44.8
Haze_22075 Corylus avellana HOM05D008207 ORTHO05D010373 6.3e-20 102.4 54 81.5
arahy.Tifrunner.gnm1.ann1.QBT4P1 Arachis hypogaea HOM05D008207 ORTHO05D010373 4.1e-19 99.8 102 53.9
Psat0s6286g0040 Pisum sativum HOM05D003133 ORTHO05D010373 2.0e-18 97.4 73 65.8
Os02g0462300 Oryza sativa ssp. japonica HOM05D008207 ORTHO05D010373 5.0e-17 92.8 49 77.6
Glyma.02G093251 Glycine max HOM05D008207 ORTHO05D010373 6.5e-17 92.4 69 68.1
SEGI_16784 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 1.2e-15 88.2 73 57.5
Sabra15G0023300 Salix brachista HOM05D001936 ORTHO05D002296 4.7e-07 59.7 52 51.9


User provided reference genes

Program Settings