Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C017092.2 Cucumis melo HOM05D005549 ORTHO05D006771 6.6e-180 634.0 346 100.0
CsaV3_1G001440 Cucumis sativus L. HOM05D005549 ORTHO05D006771 1.1e-174 616.7 347 93.7
ClCG06G017070 Citrullus lanatus HOM05D005549 ORTHO05D006771 2.4e-169 599.0 346 94.2
Sed0023293 Sechium edule HOM05D005549 ORTHO05D006771 3.3e-163 578.6 343 91.3
Dinv38568 Davidia involucrata HOM05D005549 ORTHO05D006771 4.2e-134 481.9 349 66.5
CiPaw.11G024000 Carya illinoinensis HOM05D005549 ORTHO05D006771 6.3e-130 468.0 346 63.6
Haze_07531 Corylus avellana HOM05D005549 ORTHO05D006771 2.9e-127 459.1 348 63.8
QL10p009538 Quercus lobata HOM05D005549 ORTHO05D006771 8.5e-127 457.6 347 63.4
Prupe.5G171000 Prunus persica HOM05D005549 ORTHO05D006771 2.3e-124 449.5 343 63.0
Actinidia19108 Actinidia chinensis HOM05D005549 ORTHO05D006771 6.7e-124 448.0 356 61.8
Cc04_g12210 Coffea canephora HOM05D005549 ORTHO05D006771 6.7e-124 448.0 346 62.1
Manes.06G106600 Manihot esculenta HOM05D005549 ORTHO05D006771 1.5e-123 446.8 341 62.5
Ciclev10020953m.g Citrus clementina HOM05D005549 ORTHO05D006771 1.3e-122 443.7 346 62.7
vmacro16625 Vaccinium macrocarpon HOM05D005549 ORTHO05D006771 1.3e-122 443.7 355 62.0
Nn4g25809 Nelumbo nucifera HOM05D005549 ORTHO05D006771 2.2e-122 443.0 348 60.1
Sabra14G0003300 Salix brachista HOM05D005549 ORTHO05D006771 2.4e-121 439.5 345 60.6
MD06G1171600 Malus domestica HOM05D005549 ORTHO05D006771 1.2e-120 437.2 344 60.5
Potri.014G000900 Populus trichocarpa HOM05D005549 ORTHO05D006771 1.5e-120 436.8 345 60.0
AUR62008189 Chenopodium quinoa HOM05D005549 ORTHO05D006771 2.0e-120 436.4 347 61.4
Atru.chr9.2502 Acer truncatum HOM05D005549 ORTHO05D006771 3.8e-119 432.2 349 59.9
TAR622G1114 Trochodendron aralioides HOM05D005549 ORTHO05D006771 3.8e-119 432.2 350 60.6
Rhsim12G0166100 Rhododendron simsii HOM05D005549 ORTHO05D006771 5.0e-119 431.8 350 59.4
Aqoxy3G02864 Aquilegia oxysepala HOM05D005549 ORTHO05D006771 3.2e-118 429.1 344 64.5
RcHm_v2.0_Chr7g0193241 Rosa chinensis HOM05D005549 ORTHO05D006771 3.2e-118 429.1 344 59.9
Hma1.2p1_0046F.1_g026660 Hydrangea macrophylla HOM05D005549 ORTHO05D006771 4.2e-118 428.7 398 54.0
TWI14G0382 Tripterygium wilfordii HOM05D005549 ORTHO05D006771 1.2e-117 427.2 344 61.0
FAN08G3612 Fragaria x ananassa HOM05D005549 ORTHO05D006771 3.6e-117 425.6 345 60.6
Sc12g0005230 Simmondsia chinensis HOM05D005549 ORTHO05D006771 3.6e-117 425.6 343 63.6
Thecc.03G015300 Theobroma cacao HOM05D005549 ORTHO05D006771 4.7e-117 425.2 347 60.2
Duzib205G0052 Durio zibethinus HOM05D005549 ORTHO05D006771 1.4e-116 423.7 346 60.4
Eucgr.H00383 Eucalyptus grandis HOM05D005549 ORTHO05D006771 3.0e-116 422.5 349 62.5
Ah.02g110600 Amaranthus hybridus HOM05D005549 ORTHO05D006771 5.2e-116 421.8 349 65.9
COL.COLO4_30080 Corchorus olitorius HOM05D005549 ORTHO05D006771 5.2e-116 421.8 346 64.5
TPR.G8611 Trifolium pratense HOM05D005549 ORTHO05D006771 5.2e-116 421.8 345 65.5
FvH4_5g05540 Fragaria vesca HOM05D005549 ORTHO05D006771 1.1e-115 420.6 345 60.0
FAN18G0652 Fragaria x ananassa HOM05D005549 ORTHO05D006771 1.1e-115 420.6 345 60.0
PSO478G4565 Papaver somniferum HOM05D005549 ORTHO05D006771 7.4e-115 417.9 347 66.0
FAN18G1717 Fragaria x ananassa HOM05D005549 ORTHO05D006771 1.3e-114 417.2 345 59.7
Peaxi162Scf00075g00159 Petunia axillaris HOM05D005549 ORTHO05D006771 1.7e-114 416.8 346 58.1
Lj3C19G0 Lonicera japonica HOM05D005549 ORTHO05D006771 2.2e-114 416.4 348 64.4
Medtr5g096040 Medicago truncatula HOM05D005549 ORTHO05D006771 2.2e-114 416.4 344 64.2
Gorai.006G188700 Gossypium raimondii HOM05D005549 ORTHO05D006771 2.8e-114 416.0 345 59.7
Lalb_Chr04g0247841 Lupinus albus HOM05D005549 ORTHO05D006771 2.8e-114 416.0 345 65.2
Hund09451 Selenicereus undatus HOM05D005549 ORTHO05D006771 2.8e-114 416.0 348 58.3
arahy.Tifrunner.gnm1.ann1.386HL4 Arachis hypogaea HOM05D005549 ORTHO05D006771 1.4e-113 413.7 349 65.0
Sopen05g007150 Solanum pennellii HOM05D005549 ORTHO05D006771 2.4e-113 412.9 348 56.9
EL10Ac5g10725 Beta vulgaris HOM05D005549 ORTHO05D006771 5.3e-113 411.8 346 59.0
PGSC0003DMG400028373 Solanum tuberosum HOM05D005549 ORTHO05D006771 9.1e-113 411.0 346 58.7
ECA232G3151 Erigeron canadensis HOM05D005549 ORTHO05D006771 1.6e-112 410.2 345 68.1
DCAR_016476 Daucus carota HOM05D005549 ORTHO05D006771 2.0e-112 409.8 352 63.4
Gohir.A09G171200 Gossypium hirsutum HOM05D005549 ORTHO05D006771 2.0e-112 409.8 345 58.0
PGR031G3229 Punica granatum HOM05D005549 ORTHO05D006771 2.0e-112 409.8 351 63.0
Sopen05g007130 Solanum pennellii HOM05D005549 ORTHO05D006771 2.0e-112 409.8 346 57.2
arahy.Tifrunner.gnm1.ann1.7VTX70 Arachis hypogaea HOM05D005549 ORTHO05D006771 4.5e-112 408.7 349 64.5
Gohir.D09G166900 Gossypium hirsutum HOM05D005549 ORTHO05D006771 5.9e-112 408.3 344 58.7
Ca_06401_v3 Cicer arietinum L. HOM05D005549 ORTHO05D006771 1.3e-111 407.1 344 63.4
VMungo1127G1558 Vigna mungo HOM05D005549 ORTHO05D006771 2.2e-111 406.4 345 64.1
GSVIVG01007718001 Vitis vinifera HOM05D002875 ORTHO05D003215 2.5e-110 402.9 315 68.9
Glyma.15G218700 Glycine max HOM05D005549 ORTHO05D006771 1.2e-109 400.6 345 64.1
Oeu024700.1 Olea europaea HOM05D005549 ORTHO05D006771 1.2e-109 400.6 349 66.8
Phvul.011G182000 Phaseolus vulgaris HOM05D005549 ORTHO05D006771 1.2e-109 400.6 345 65.8
Psat2g007040 Pisum sativum HOM05D005549 ORTHO05D006771 1.2e-109 400.6 345 62.0
Glyma.09G077900 Glycine max HOM05D005549 ORTHO05D006771 2.1e-109 399.8 345 63.8
LjContig00081g0017630 Lotus japonicus HOM05D005549 ORTHO05D006771 3.6e-109 399.1 345 62.9
arahy.Tifrunner.gnm1.ann1.BH3JLW Arachis hypogaea HOM05D005549 ORTHO05D006771 6.1e-109 398.3 341 64.5
MSTRG.26261 Avicennia marina HOM05D005549 ORTHO05D006771 1.4e-108 397.1 345 58.3
Phvul.011G182066 Phaseolus vulgaris HOM05D005549 ORTHO05D006771 1.4e-108 397.1 345 64.3
Peaxi162Scf00141g00210 Petunia axillaris HOM05D005549 ORTHO05D006771 1.2e-107 394.0 344 56.4
CANSAT25G1426 Cannabis sativa HOM05D005549 ORTHO05D006771 3.3e-107 392.5 344 61.3
MBI16_g05472_MAGBIO Magnolia biondii HOM05D005549 ORTHO05D006771 3.3e-107 392.5 345 56.8
FAN13G1520 Fragaria x ananassa HOM05D005549 ORTHO05D006771 5.3e-105 385.2 345 57.4
Nitab4.5_0002265g0110 Nicotiana tabacum HOM05D005549 ORTHO05D006771 2.7e-104 382.9 341 56.3
Aa31LG11G650 Aethionema arabicum HOM05D005549 ORTHO05D006771 2.2e-103 379.8 350 54.6
Lsat_1_v5_gn_4_75780 Lactuca sativa HOM05D005549 ORTHO05D006771 2.5e-102 376.3 349 65.6
FAN04G2905 Fragaria x ananassa HOM05D005549 ORTHO05D006771 9.4e-102 374.4 345 56.2
Carub.0008s2372 Capsella rubella HOM05D005549 ORTHO05D006771 8.0e-101 371.3 346 53.2
Migut.K00304 Erythranthe guttata HOM05D005549 ORTHO05D006771 1.0e-100 370.9 350 54.0
unitig_37.g12682 Utricularia gibba HOM05D005549 ORTHO05D006771 2.3e-100 369.8 353 55.0
Thhalv10004522m.g Eutrema salsugineum HOM05D005549 ORTHO05D006771 5.2e-100 368.6 345 53.0
Nitab4.5_0001239g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 5.2e-100 368.6 336 55.7
Sp2g26140 Schrenkiella parvula HOM05D005549 ORTHO05D006771 1.5e-99 367.1 345 52.8
AL8G40040 Arabidopsis lyrata HOM05D005549 ORTHO05D006771 2.0e-99 366.7 345 57.1
AT5G63010 Arabidopsis thaliana HOM05D005549 ORTHO05D006771 2.0e-99 366.7 350 53.4
CARHR276820 Cardamine hirsuta HOM05D005549 ORTHO05D006771 2.0e-99 366.7 349 51.3
BcaB02g09715 Brassica carinata HOM05D005549 ORTHO05D006771 3.4e-99 365.9 346 62.4
BcaC01g02548 Brassica carinata HOM05D005549 ORTHO05D006771 5.7e-99 365.2 343 60.9
C03p63600 Brassica napus HOM05D005549 ORTHO05D006771 5.7e-99 365.2 343 60.9
BolC3t18618H Brassica oleracea HOM05D005549 ORTHO05D006771 5.7e-99 365.2 343 60.9
A06p29790 Brassica napus HOM05D005549 ORTHO05D006771 1.8e-97 360.1 343 61.8
BraA06t25926Z Brassica rapa HOM05D005549 ORTHO05D006771 7.0e-97 358.2 343 59.5
SGA_v2.0_scaffold293G47425 Striga asiatica HOM05D005549 ORTHO05D006771 1.2e-96 357.5 346 63.3
SHI17110 Sapria himalayana HOM05D005549 ORTHO05D006771 7.2e-94 348.2 342 51.8
Os04g0507900 Oryza sativa ssp. japonica HOM05D005549 ORTHO05D006771 2.8e-93 346.3 347 51.9
THA.LOC104818503 Tarenaya hassleriana HOM05D005549 ORTHO05D006771 6.1e-93 345.1 329 58.7
Zm00001eb426250 Zea mays HOM05D005549 ORTHO05D006771 4.4e-91 339.0 347 51.3
Eucgr.C01244 Eucalyptus grandis HOM05D005549 ORTHO05D006771 2.8e-90 336.3 348 48.9
CDE02G3271 Ceratophyllum demersum HOM05D005549 ORTHO05D006771 2.3e-84 316.6 345 47.2
HPP92_021890 Vanilla planifolia HOM05D005549 ORTHO05D006771 1.4e-81 307.4 349 51.6
HanXRQChr09g0272091 Helianthus annuus HOM05D005549 ORTHO05D006771 8.6e-79 298.1 275 66.9
Cpa.g.c31519.1 Carica papaya HOM05D005549 ORTHO05D006771 4.6e-72 275.8 242 55.4
Mapoly0027s0008 Marchantia polymorpha HOM05D005549 ORTHO05D006771 1.3e-66 257.7 384 38.0
Pp3c9_15370 Physcomitrium patens HOM05D005549 ORTHO05D006771 6.4e-66 255.4 345 40.6
Solyc05g012300.1 Solanum lycopersicum HOM05D005549 ORTHO05D006771 6.4e-66 255.4 222 55.0
Solyc05g012320.1 Solanum lycopersicum HOM05D005549 ORTHO05D006771 8.3e-66 255.0 224 54.0
Glyma.08G230900 Glycine max HOM05D005549 ORTHO05D006771 1.4e-65 254.2 223 64.1
arahy.Tifrunner.gnm1.ann1.BVT45G Arachis hypogaea HOM05D005549 ORTHO05D006771 4.1e-65 252.7 218 65.6
Potri.012G087300 Populus trichocarpa HOM05D005549 ORTHO05D006771 4.1e-65 252.7 222 55.9
ECA232G2898 Erigeron canadensis HOM05D005549 ORTHO05D006771 5.4e-65 252.3 222 69.8
AUR62030941 Chenopodium quinoa HOM05D005549 ORTHO05D006771 2.3e-63 246.9 226 54.9
arahy.Tifrunner.gnm1.ann1.8228C9 Arachis hypogaea HOM05D005549 ORTHO05D006771 4.3e-62 242.7 209 66.0
arahy.Tifrunner.gnm1.ann1.DCL1V8 Arachis hypogaea HOM05D005549 ORTHO05D006771 4.3e-62 242.7 209 66.0
Atru.chr9.2510 Acer truncatum HOM05D005549 ORTHO05D006771 1.2e-61 241.1 212 55.2
SMO367G1205 Selaginella moellendorffii HOM05D005549 ORTHO05D006771 4.4e-59 232.6 343 41.7
CSS0043757 Camellia sinensis var. sinensis HOM05D005549 ORTHO05D006771 3.8e-58 229.6 225 52.0
AagrBONN_evm.TU.Sc2ySwM_228.3282 Anthoceros agrestis HOM05D005549 ORTHO05D006771 1.3e-55 221.1 376 35.1
ATR0807G008 Amborella trichopoda HOM05D005549 ORTHO05D006771 1.7e-55 220.7 221 47.1
Gorai.001G151900 Gossypium raimondii HOM05D005549 ORTHO05D006771 6.6e-55 218.8 186 59.7
Peaxi162Scf00141g10027 Petunia axillaris HOM05D005549 ORTHO05D006771 8.7e-55 218.4 184 56.0
Gohir.D07G139801 Gossypium hirsutum HOM05D005549 ORTHO05D006771 2.8e-53 213.4 186 58.6
MD06G1171300 Malus domestica HOM05D005549 ORTHO05D006771 8.7e-47 191.8 315 39.4
HanXRQChr04g0107691 Helianthus annuus HOM05D005549 ORTHO05D006771 3.3e-46 189.9 182 70.3
MD14G1177100 Malus domestica HOM05D005549 ORTHO05D006771 3.8e-42 176.4 180 50.6
HanXRQChr16g0506951 Helianthus annuus HOM05D005549 ORTHO05D006771 1.3e-39 167.9 189 46.6
Eucgr.H00387 Eucalyptus grandis HOM05D005549 ORTHO05D006771 4.3e-38 162.9 201 42.8
Atru.chr9.2511 Acer truncatum HOM05D005549 ORTHO05D006771 1.4e-36 157.9 102 69.6
CBR_g24288 Chara braunii HOM05D005549 ORTHO05D006771 3.1e-36 156.8 514 27.4
ATR0807G036 Amborella trichopoda HOM05D005549 ORTHO05D006771 5.8e-27 125.9 104 56.7
Cpa.g.c31519.2 Carica papaya HOM05D005549 ORTHO05D006771 2.2e-26 124.0 85 68.2
Cre10.g434300 Chlamydomonas reinhardtii HOM05D005549 ORTHO05D006771 1.1e-25 121.7 260 38.1
Gohir.D12G085501 Gossypium hirsutum HOM05D005549 ORTHO05D006771 7.9e-24 115.5 140 47.1
TPR.G8752 Trifolium pratense HOM05D005549 ORTHO05D006771 1.8e-23 114.4 85 58.8
Sabra12G0062500 Salix brachista HOM05D005549 ORTHO05D006771 3.0e-23 113.6 95 62.1
PRCOL_00001377 Prasinoderma coloniale HOM05D005549 ORTHO05D006771 8.2e-21 105.5 357 28.6
MD14G1177000 Malus domestica HOM05D005549 ORTHO05D006771 8.5e-18 95.5 67 62.7
Nitab4.5_0003499g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 4.6e-16 89.7 99 48.5
MCO16G545 Micromonas commoda HOM05D005549 ORTHO05D006771 1.0e-15 88.6 354 26.3
Lj5C126T17 Lonicera japonica HOM05D005549 ORTHO05D006771 6.7e-15 85.9 97 47.4


User provided reference genes

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