Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 3.7e-74 281.6 154 100.0
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 2.0e-59 232.6 154 85.1
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 1.9e-54 216.1 146 81.5
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.6e-43 179.1 160 70.6
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.6e-43 179.1 160 70.6
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 3.4e-43 178.7 158 69.0
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 3.4e-43 178.7 155 69.0
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 9.8e-43 177.2 158 69.6
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 1.1e-41 173.7 155 67.1
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 5.4e-41 171.4 149 72.5
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 5.4e-41 171.4 155 67.1
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 2.3e-39 166.0 155 67.7
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 5.1e-39 164.9 156 66.7
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 6.6e-39 164.5 156 66.0
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 1.9e-38 162.9 159 64.2
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 2.5e-38 162.5 166 62.7
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 2.5e-38 162.5 157 65.6
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 3.3e-38 162.2 157 64.3
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 4.3e-38 161.8 159 67.9
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 5.6e-38 161.4 158 67.1
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 1.6e-37 159.8 157 65.0
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 2.8e-37 159.1 156 66.7
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 6.2e-37 157.9 158 63.9
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 6.2e-37 157.9 160 66.2
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 1.4e-36 156.8 156 67.9
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 1.8e-36 156.4 158 53.8
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 1.8e-36 156.4 106 82.1
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 6.8e-36 154.5 155 64.5
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 1.2e-35 153.7 156 64.7
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 2.0e-35 152.9 103 84.5
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 2.0e-35 152.9 159 66.7
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 2.6e-35 152.5 108 85.2
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 7.6e-35 151.0 155 62.6
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 1.7e-34 149.8 121 72.7
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 1.7e-34 149.8 127 74.0
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 2.2e-34 149.4 160 65.0
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 3.7e-34 148.7 151 64.9
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 3.7e-34 148.7 154 64.3
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 6.4e-34 147.9 103 80.6
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 8.4e-34 147.5 115 75.7
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 1.1e-33 147.1 124 60.5
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 1.4e-33 146.7 119 73.1
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 1.4e-33 146.7 108 80.6
CsaV3_4G036390 Cucumis sativus L. HOM05D018710 ORTHO05D009055 1.9e-33 146.4 83 91.6
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 2.4e-33 146.0 153 64.7
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 3.2e-33 145.6 105 80.0
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 4.1e-33 145.2 152 65.8
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 4.1e-33 145.2 155 62.6
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 4.1e-33 145.2 109 77.1
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 4.1e-33 145.2 132 68.9
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 4.1e-33 145.2 150 61.3
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 7.1e-33 144.4 156 63.5
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 7.1e-33 144.4 156 63.5
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 9.2e-33 144.1 151 64.2
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 9.2e-33 144.1 152 64.5
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 1.2e-32 143.7 118 73.7
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 1.2e-32 143.7 105 81.0
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 1.6e-32 143.3 152 64.5
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 2.1e-32 142.9 100 85.0
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 2.7e-32 142.5 105 78.1
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 2.7e-32 142.5 151 63.6
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 7.8e-32 141.0 152 61.8
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 7.8e-32 141.0 152 61.8
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 7.8e-32 141.0 151 63.6
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 1.0e-31 140.6 103 79.6
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 1.7e-31 139.8 121 70.2
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 2.3e-31 139.4 151 59.6
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 2.3e-31 139.4 118 66.9
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 3.0e-31 139.0 152 63.2
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 5.1e-31 138.3 103 77.7
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 5.1e-31 138.3 103 77.7
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 5.1e-31 138.3 107 75.7
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 6.6e-31 137.9 143 63.6
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 1.1e-30 137.1 141 64.5
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 1.9e-30 136.3 107 75.7
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 3.3e-30 135.6 160 60.6
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 3.3e-30 135.6 109 75.2
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 4.3e-30 135.2 160 60.0
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 4.3e-30 135.2 99 81.8
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 5.6e-30 134.8 112 74.1
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 7.3e-30 134.4 112 75.0
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 9.6e-30 134.0 156 59.0
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 9.6e-30 134.0 120 69.2
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 9.6e-30 134.0 152 59.9
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 9.6e-30 134.0 142 64.1
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 1.6e-29 133.3 128 64.8
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 3.6e-29 132.1 100 80.0
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 6.2e-29 131.3 98 81.6
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 1.4e-28 130.2 138 63.8
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 1.4e-28 130.2 153 60.1
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 2.4e-28 129.4 134 64.2
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 3.1e-28 129.0 155 59.4
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 4.0e-28 128.6 153 58.8
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 5.2e-28 128.3 97 76.3
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 2.9e-26 122.5 93 75.3
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 3.8e-26 122.1 78 70.5
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 4.2e-25 118.6 94 79.8
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 2.1e-24 116.3 85 78.8
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 3.5e-24 115.5 86 80.2
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 7.8e-24 114.4 79 84.8
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 5.1e-23 111.7 98 69.4
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 6.6e-23 111.3 75 86.7
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 6.6e-23 111.3 75 85.3
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 5.6e-22 108.2 86 69.8
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 2.1e-21 106.3 83 72.3
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 1.3e-13 80.5 94 50.0
Oeu010291.1 Olea europaea HOM05D007253 ORTHO05D009055 9.6e-06 54.3 58 43.1


User provided reference genes

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