Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C016940.2 Cucumis melo HOM05D007824 ORTHO05D009875 1.1e-33 146.0 71 100.0
ClCG05G016050 Citrullus lanatus HOM05D007824 ORTHO05D009875 6.8e-23 110.2 58 93.1
Sed0025864 Sechium edule HOM05D007824 ORTHO05D009875 2.5e-17 91.7 52 84.6
Sed0013399 Sechium edule HOM05D007824 ORTHO05D009875 2.1e-16 88.6 52 80.8
CSS0038513 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 2.6e-14 81.6 52 71.2
Nitab4.5_0007473g0010 Nicotiana tabacum HOM05D007824 ORTHO05D009875 2.6e-14 81.6 52 75.0
Eucgr.C04026 Eucalyptus grandis HOM05D007824 ORTHO05D009875 1.3e-13 79.3 58 65.5
Prupe.1G398400 Prunus persica HOM05D007824 ORTHO05D009875 2.9e-13 78.2 54 72.2
Solyc08g006580.3 Solanum lycopersicum HOM05D007824 ORTHO05D009875 6.4e-13 77.0 52 69.2
PGSC0003DMG402026306 Solanum tuberosum HOM05D007824 ORTHO05D009875 8.3e-13 76.6 52 69.2
Nn5g27701 Nelumbo nucifera HOM05D007824 ORTHO05D009875 1.1e-12 76.3 52 69.2
RcHm_v2.0_Chr6g0299081 Rosa chinensis HOM05D007824 ORTHO05D009875 2.4e-12 75.1 54 70.4
Oeu030057.1 Olea europaea HOM05D007824 ORTHO05D009875 3.2e-12 74.7 52 65.4
CiPaw.08G004000 Carya illinoinensis HOM05D007824 ORTHO05D009875 4.1e-12 74.3 53 67.9
Ciclev10010135m.g Citrus clementina HOM05D007824 ORTHO05D009875 4.1e-12 74.3 52 71.2
Migut.E01438 Erythranthe guttata HOM05D007824 ORTHO05D009875 4.1e-12 74.3 52 65.4
Manes.03G006300 Manihot esculenta HOM05D007824 ORTHO05D009875 7.1e-12 73.6 48 70.8
CSS0035617 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 1.2e-11 72.8 71 57.7
Migut.A00397 Erythranthe guttata HOM05D007824 ORTHO05D009875 1.6e-11 72.4 52 65.4
Atru.chr7.2598 Acer truncatum HOM05D007824 ORTHO05D009875 4.6e-11 70.9 55 63.6
Thecc.09G011700 Theobroma cacao HOM05D007824 ORTHO05D009875 4.6e-11 70.9 43 74.4
unitig_46.g18221 Utricularia gibba HOM05D007824 ORTHO05D009875 4.6e-11 70.9 53 56.6
Gohir.A13G178900 Gossypium hirsutum HOM05D007824 ORTHO05D009875 6.0e-11 70.5 43 74.4
Gohir.D13G187000 Gossypium hirsutum HOM05D007824 ORTHO05D009875 6.0e-11 70.5 43 74.4
Sed0001567 Sechium edule HOM05D007824 ORTHO05D009875 7.8e-11 70.1 52 61.5
THA.LOC104803330 Tarenaya hassleriana HOM05D007824 ORTHO05D009875 7.8e-11 70.1 44 70.5
CSS0008945 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 1.0e-10 69.7 71 54.9
Sed0025799 Sechium edule HOM05D007824 ORTHO05D009875 1.0e-10 69.7 52 63.5
CSS0044029 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 1.7e-10 68.9 71 54.9
Duzib168G1878 Durio zibethinus HOM05D007824 ORTHO05D009875 1.7e-10 68.9 43 69.8
Gohir.D05G064600 Gossypium hirsutum HOM05D007824 ORTHO05D009875 1.7e-10 68.9 43 69.8
ClCG08G013840 Citrullus lanatus HOM05D007824 ORTHO05D009875 2.3e-10 68.6 52 57.7
Gorai.009G065300 Gossypium raimondii HOM05D007824 ORTHO05D009875 3.0e-10 68.2 42 71.4
MD08G1050300 Malus domestica HOM05D007824 ORTHO05D009875 3.0e-10 68.2 54 63.0
Aa31LG3G16350 Aethionema arabicum HOM05D007824 ORTHO05D009875 5.1e-10 67.4 54 61.1
Sc23g0006310 Simmondsia chinensis HOM05D007824 ORTHO05D009875 5.1e-10 67.4 55 63.6
CSS0021115 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 6.6e-10 67.0 71 53.5
CSS0041715 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 6.6e-10 67.0 70 54.3
CiPaw.07G233700 Carya illinoinensis HOM05D007824 ORTHO05D009875 6.6e-10 67.0 44 72.7
CARHR202570 Cardamine hirsuta HOM05D007824 ORTHO05D009875 8.6e-10 66.6 52 63.5
Thhalv10015471m.g Eutrema salsugineum HOM05D007824 ORTHO05D009875 8.6e-10 66.6 52 63.5
Glyma.04G059451 Glycine max HOM05D007824 ORTHO05D009875 8.6e-10 66.6 53 60.4
Phvul.009G085600 Phaseolus vulgaris HOM05D007824 ORTHO05D009875 1.1e-09 66.2 53 64.2
Gohir.A05G062100 Gossypium hirsutum HOM05D007824 ORTHO05D009875 2.5e-09 65.1 42 66.7
MD15G1044500 Malus domestica HOM05D007824 ORTHO05D009875 3.3e-09 64.7 49 61.2
Potri.018G014101 Populus trichocarpa HOM05D007824 ORTHO05D009875 3.3e-09 64.7 43 67.4
Glyma.06G059900 Glycine max HOM05D007824 ORTHO05D009875 5.6e-09 63.9 53 58.5
Lalb_Chr08g0244541 Lupinus albus HOM05D007824 ORTHO05D009875 7.3e-09 63.5 53 60.4
Oeu006856.1 Olea europaea HOM05D007824 ORTHO05D009875 7.3e-09 63.5 50 60.0
Glyma.17G221200 Glycine max HOM05D007824 ORTHO05D009875 1.6e-08 62.4 47 57.4
CsaV3_4G036330 Cucumis sativus L. HOM05D007824 ORTHO05D009875 6.2e-08 60.5 32 93.8
Lj5g0022212 Lotus japonicus HOM05D007824 ORTHO05D009875 1.1e-07 59.7 61 54.1
Medtr3g105765 Medicago truncatula HOM05D007824 ORTHO05D009875 1.4e-07 59.3 53 58.5
arahy.Tifrunner.gnm1.ann1.58R7DF Arachis hypogaea HOM05D007824 ORTHO05D009875 1.8e-07 58.9 60 53.3
arahy.Tifrunner.gnm1.ann1.A82CWH Arachis hypogaea HOM05D007824 ORTHO05D009875 1.8e-07 58.9 60 53.3
Os10g0478900 Oryza sativa ssp. japonica HOM05D007824 ORTHO05D009875 1.8e-07 58.9 44 63.6
Zm00001eb221680 Zea mays HOM05D007824 ORTHO05D009875 1.8e-07 58.9 45 64.4
AT5G10745 Arabidopsis thaliana HOM05D007824 ORTHO05D009875 3.1e-07 58.2 49 57.1
Glyma.14G104600 Glycine max HOM05D007824 ORTHO05D009875 3.1e-07 58.2 39 64.1
BcaB01g06276 Brassica carinata HOM05D007824 ORTHO05D009875 4.0e-07 57.8 49 55.1
AL6G21300 Arabidopsis lyrata HOM05D007824 ORTHO05D009875 5.2e-07 57.4 49 57.1
Mapoly0056s0140 Marchantia polymorpha HOM05D007824 ORTHO05D009875 5.2e-07 57.4 49 57.1
Medtr1g013350 Medicago truncatula HOM05D007824 ORTHO05D009875 5.2e-07 57.4 48 60.4
BcaB01g05502 Brassica carinata HOM05D007824 ORTHO05D009875 1.2e-06 56.2 49 55.1
A03p04740 Brassica napus HOM05D007824 ORTHO05D009875 1.2e-06 56.2 49 55.1
C03p05450 Brassica napus HOM05D007824 ORTHO05D009875 1.2e-06 56.2 49 55.1
BraA03t09814Z Brassica rapa HOM05D007824 ORTHO05D009875 1.2e-06 56.2 49 55.1
Carub.0006s0922 Capsella rubella HOM05D007824 ORTHO05D009875 1.2e-06 56.2 49 55.1
TPR.G38894 Trifolium pratense HOM05D007824 ORTHO05D009875 1.5e-06 55.8 45 62.2
Thhalv10005256m.g Eutrema salsugineum HOM05D007824 ORTHO05D009875 2.0e-06 55.5 39 64.1


User provided reference genes

Program Settings