Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C016846.2 Cucumis melo HOM05D008077 ORTHO05D010221 1.7e-88 329.3 172 100.0
CsaV3_4G035360 Cucumis sativus L. HOM05D008077 ORTHO05D010221 1.2e-73 280.0 155 95.5
ClCG05G017630 Citrullus lanatus HOM05D008077 ORTHO05D010221 4.1e-66 255.0 155 87.7
Sed0028055 Sechium edule HOM05D008077 ORTHO05D010221 6.9e-29 131.3 157 55.4
Cfa013722 Carpinus fangiana HOM05D008077 ORTHO05D010221 1.2e-28 130.6 171 45.6
Haze_22366 Corylus avellana HOM05D008077 ORTHO05D010221 7.6e-28 127.9 171 43.9
Thecc.08G082700 Theobroma cacao HOM05D008077 ORTHO05D010221 2.5e-26 122.9 170 42.9
CiPaw.08G053400 Carya illinoinensis HOM05D008077 ORTHO05D010221 1.6e-25 120.2 126 47.6
Eucgr.F02208 Eucalyptus grandis HOM05D008077 ORTHO05D010221 2.1e-25 119.8 162 43.2
QL09p016211 Quercus lobata HOM05D008077 ORTHO05D010221 1.0e-24 117.5 171 42.1
TWI56G0834 Tripterygium wilfordii HOM05D008077 ORTHO05D010221 2.3e-24 116.3 158 43.0
Dinv39194 Davidia involucrata HOM05D008077 ORTHO05D010221 6.7e-24 114.8 158 46.2
Gohir.D01G112200 Gossypium hirsutum HOM05D008077 ORTHO05D010221 1.5e-23 113.6 155 41.9
PGR031G0263 Punica granatum HOM05D008077 ORTHO05D010221 1.9e-23 113.2 159 42.8
Lj5g0022198 Lotus japonicus HOM05D008077 ORTHO05D010221 2.5e-23 112.8 128 45.3
Lalb_Chr14g0367971 Lupinus albus HOM05D008077 ORTHO05D010221 3.3e-23 112.5 158 41.8
PSO541G6554 Papaver somniferum HOM05D008077 ORTHO05D010221 3.3e-23 112.5 150 42.0
Glyma.17G232225 Glycine max HOM05D008077 ORTHO05D010221 4.3e-23 112.1 116 49.1
Hma1.2p1_4204F.1_g338450 Hydrangea macrophylla HOM05D008077 ORTHO05D010221 4.3e-23 112.1 158 44.3
Atru.chr13.887 Acer truncatum HOM05D008077 ORTHO05D010221 5.7e-23 111.7 157 43.3
TAR376G0563 Trochodendron aralioides HOM05D008077 ORTHO05D010221 5.7e-23 111.7 103 48.5
Duzib116G0694 Durio zibethinus HOM05D008077 ORTHO05D010221 7.4e-23 111.3 159 44.0
RcHm_v2.0_Chr6g0310221 Rosa chinensis HOM05D008077 ORTHO05D010221 7.4e-23 111.3 161 44.1
Gorai.002G137100 Gossypium raimondii HOM05D008077 ORTHO05D010221 9.7e-23 110.9 155 41.3
GSVIVG01009281001 Vitis vinifera HOM05D008077 ORTHO05D010221 9.7e-23 110.9 157 41.4
Glyma.14G090800 Glycine max HOM05D008077 ORTHO05D010221 1.7e-22 110.2 158 41.8
Nn6g34549 Nelumbo nucifera HOM05D008077 ORTHO05D010221 1.7e-22 110.2 155 42.6
COL.COLO4_28429 Corchorus olitorius HOM05D008077 ORTHO05D010221 3.7e-22 109.0 123 45.5
Gohir.A01G124500 Gossypium hirsutum HOM05D008077 ORTHO05D010221 4.8e-22 108.6 155 41.9
Phvul.001G032000 Phaseolus vulgaris HOM05D008077 ORTHO05D010221 4.8e-22 108.6 158 42.4
Medtr1g017160 Medicago truncatula HOM05D008077 ORTHO05D010221 8.2e-22 107.8 116 44.8
arahy.Tifrunner.gnm1.ann1.PWM57A Arachis hypogaea HOM05D008077 ORTHO05D010221 2.4e-21 106.3 160 41.9
Dinv44921 Davidia involucrata HOM05D008077 ORTHO05D010221 2.4e-21 106.3 155 43.9
Potri.005G149500 Populus trichocarpa HOM05D008077 ORTHO05D010221 5.3e-21 105.1 180 36.1
arahy.Tifrunner.gnm1.ann1.JS0EE0 Arachis hypogaea HOM05D008077 ORTHO05D010221 1.5e-20 103.6 160 40.6
Manes.18G051200 Manihot esculenta HOM05D008077 ORTHO05D010221 2.6e-20 102.8 129 42.6
CSS0006446 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 5.9e-20 101.7 172 38.4
Prupe.1G417600 Prunus persica HOM05D008077 ORTHO05D010221 5.9e-20 101.7 164 42.1
VMungo0647G0255 Vigna mungo HOM05D008077 ORTHO05D010221 1.0e-19 100.9 158 39.9
Ca_06992_v3 Cicer arietinum L. HOM05D008077 ORTHO05D010221 1.7e-19 100.1 176 34.1
FAN20G1346 Fragaria x ananassa HOM05D008077 ORTHO05D010221 2.2e-19 99.8 162 42.0
Actinidia10235 Actinidia chinensis HOM05D008077 ORTHO05D010221 2.9e-19 99.4 173 37.6
FAN24G1375 Fragaria x ananassa HOM05D008077 ORTHO05D010221 2.9e-19 99.4 162 41.4
CDE06G2465 Ceratophyllum demersum HOM05D008077 ORTHO05D010221 3.8e-19 99.0 156 36.5
FvH4_2g32450 Fragaria vesca HOM05D008077 ORTHO05D010221 8.5e-19 97.8 162 40.7
unitig_578.g16165 Utricularia gibba HOM05D008077 ORTHO05D010221 8.5e-19 97.8 100 48.0
Sc02g0008240 Simmondsia chinensis HOM05D008077 ORTHO05D010221 1.1e-18 97.4 92 46.7
MSTRG.22201 Avicennia marina HOM05D008077 ORTHO05D010221 1.4e-18 97.1 102 47.1
Ciclev10002390m.g Citrus clementina HOM05D008077 ORTHO05D010221 1.9e-18 96.7 102 47.1
MBI16_g09811_MAGBIO Magnolia biondii HOM05D008077 ORTHO05D010221 1.9e-18 96.7 122 40.2
CSS0048473 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 2.5e-18 96.3 122 42.6
AUR62034975 Chenopodium quinoa HOM05D008077 ORTHO05D010221 2.5e-18 96.3 113 43.4
Psat6g018560 Pisum sativum HOM05D008077 ORTHO05D010221 3.2e-18 95.9 96 45.8
Sabra05G0118800 Salix brachista HOM05D008077 ORTHO05D010221 3.2e-18 95.9 135 39.3
TPR.G13063 Trifolium pratense HOM05D008077 ORTHO05D010221 4.2e-18 95.5 123 39.8
AUR62039341 Chenopodium quinoa HOM05D008077 ORTHO05D010221 5.5e-18 95.1 113 42.5
Actinidia19284 Actinidia chinensis HOM05D008077 ORTHO05D010221 7.2e-18 94.7 173 38.2
MD08G1076300 Malus domestica HOM05D008077 ORTHO05D010221 7.2e-18 94.7 159 39.6
CANSAT25G0587 Cannabis sativa HOM05D008077 ORTHO05D010221 1.6e-17 93.6 177 36.7
EL10Ac1g02339 Beta vulgaris HOM05D008077 ORTHO05D010221 4.7e-17 92.0 120 38.3
PSO675G3170 Papaver somniferum HOM05D008077 ORTHO05D010221 6.1e-17 91.7 157 38.9
FAN15G0649 Fragaria x ananassa HOM05D008077 ORTHO05D010221 6.7e-16 88.2 162 39.5
Hund05263 Selenicereus undatus HOM05D008077 ORTHO05D010221 1.1e-15 87.4 120 37.5
Oeu048561.1 Olea europaea HOM05D008077 ORTHO05D010221 1.5e-15 87.0 114 41.2
THA.LOC104806984 Tarenaya hassleriana HOM05D008077 ORTHO05D010221 3.3e-15 85.9 169 33.1
FAN27G3028 Fragaria x ananassa HOM05D008077 ORTHO05D010221 9.7e-15 84.3 161 39.1
Cc10_g07800 Coffea canephora HOM05D008077 ORTHO05D010221 2.2e-14 83.2 144 32.6
SGA_v2.0_scaffold152G36867 Striga asiatica HOM05D008077 ORTHO05D010221 1.3e-11 73.9 138 39.9
Migut.N02805 Erythranthe guttata HOM05D008077 ORTHO05D010221 5.0e-11 72.0 84 41.7
HPP92_006033 Vanilla planifolia HOM05D008077 ORTHO05D010221 3.9e-08 62.4 65 43.1


User provided reference genes

Program Settings