Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C016747.2 Cucumis melo HOM05D000955 ORTHO05D001429 1.5e-43 179.1 90 100.0
CsaV3_4G034270 Cucumis sativus L. HOM05D000955 ORTHO05D001429 5.4e-41 170.6 89 96.6
ClCG05G019820 Citrullus lanatus HOM05D000955 ORTHO05D001429 1.2e-35 152.9 86 84.9
Sed0016895 Sechium edule HOM05D000955 ORTHO05D001429 1.9e-30 135.6 86 70.9
Gohir.A01G119200 Gossypium hirsutum HOM05D000955 ORTHO05D001429 8.4e-10 67.0 71 46.5
Thecc.08G008600 Theobroma cacao HOM05D000955 ORTHO05D001429 8.4e-10 67.0 71 42.3
Thecc.04G032100 Theobroma cacao HOM05D000955 ORTHO05D001429 1.4e-09 66.2 75 38.7
Cfa018534 Carpinus fangiana HOM05D000955 ORTHO05D001429 1.9e-09 65.9 79 43.0
Gohir.D01G107400 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.9e-09 65.9 71 45.1
Gorai.002G131800 Gossypium raimondii HOM05D000955 ORTHO05D001429 1.9e-09 65.9 71 45.1
Atru.chr13.673 Acer truncatum HOM05D000955 ORTHO05D001429 2.4e-09 65.5 86 38.4
Atru.chr13.685 Acer truncatum HOM05D000955 ORTHO05D001429 3.2e-09 65.1 76 42.1
Haze_17535 Corylus avellana HOM05D000955 ORTHO05D001429 7.1e-09 63.9 73 45.2
Atru.chr13.684 Acer truncatum HOM05D000955 ORTHO05D001429 1.6e-08 62.8 68 42.6
Manes.18G036100 Manihot esculenta HOM05D000955 ORTHO05D001429 1.6e-08 62.8 76 39.5
Sc15g0003450 Simmondsia chinensis HOM05D000955 ORTHO05D001429 1.6e-08 62.8 82 39.0
CiPaw.16G045200 Carya illinoinensis HOM05D000955 ORTHO05D001429 2.1e-08 62.4 86 38.4
QL02p005194 Quercus lobata HOM05D000955 ORTHO05D001429 2.1e-08 62.4 72 38.9
CiPaw.15G060100 Carya illinoinensis HOM05D000955 ORTHO05D001429 2.7e-08 62.0 85 32.9
Thecc.04G032600 Theobroma cacao HOM05D000955 ORTHO05D001429 2.7e-08 62.0 88 34.1
COL.COLO4_08734 Corchorus olitorius HOM05D000955 ORTHO05D001429 3.5e-08 61.6 87 33.3
Sc26g0000770 Simmondsia chinensis HOM05D000955 ORTHO05D001429 3.5e-08 61.6 74 39.2
Thecc.08G009000 Theobroma cacao HOM05D000955 ORTHO05D001429 3.5e-08 61.6 78 39.7
CiPaw.15G058900 Carya illinoinensis HOM05D000955 ORTHO05D001429 6.0e-08 60.8 84 34.5
Potri.008G079132 Populus trichocarpa HOM05D000955 ORTHO05D001429 6.0e-08 60.8 78 39.7
QL02p005158 Quercus lobata HOM05D000955 ORTHO05D001429 6.0e-08 60.8 73 42.5
CiPaw.16G044800 Carya illinoinensis HOM05D000955 ORTHO05D001429 1.0e-07 60.1 76 39.5
Dinv35967 Davidia involucrata HOM05D000955 ORTHO05D001429 1.0e-07 60.1 75 41.3
QL02p005168 Quercus lobata HOM05D000955 ORTHO05D001429 1.0e-07 60.1 87 40.2
Sed0024179 Sechium edule HOM05D000955 ORTHO05D001429 1.0e-07 60.1 80 37.5
QL02p005214 Quercus lobata HOM05D000023 ORTHO05D000014 1.3e-07 59.7 72 41.7
Cfa018533 Carpinus fangiana HOM05D000955 ORTHO05D001429 1.7e-07 59.3 74 37.8
Thecc.08G009100 Theobroma cacao HOM05D000955 ORTHO05D001429 1.7e-07 59.3 70 40.0
Atru.chr13.675 Acer truncatum HOM05D000955 ORTHO05D001429 2.3e-07 58.9 71 36.6
COL.COLO4_26493 Corchorus olitorius HOM05D000955 ORTHO05D001429 2.3e-07 58.9 89 37.1
Gohir.D06G016500 Gossypium hirsutum HOM05D000955 ORTHO05D001429 2.3e-07 58.9 85 34.1
Gorai.010G019300 Gossypium raimondii HOM05D000955 ORTHO05D001429 2.3e-07 58.9 72 37.5
Gorai.010G019400 Gossypium raimondii HOM05D000955 ORTHO05D001429 2.3e-07 58.9 85 34.1
HanXRQChr09g0267841 Helianthus annuus HOM05D000955 ORTHO05D001429 2.3e-07 58.9 79 34.2
Potri.008G079066 Populus trichocarpa HOM05D000955 ORTHO05D001429 2.3e-07 58.9 78 38.5
QL02p005235 Quercus lobata HOM05D000955 ORTHO05D001429 2.3e-07 58.9 72 37.5
Gohir.A06G018101 Gossypium hirsutum HOM05D000955 ORTHO05D001429 3.0e-07 58.5 72 38.9
QL02p005180 Quercus lobata HOM05D000955 ORTHO05D001429 3.9e-07 58.2 72 41.7
Thecc.08G008700 Theobroma cacao HOM05D000955 ORTHO05D001429 3.9e-07 58.2 73 38.4
Thecc.08G009900 Theobroma cacao HOM05D000955 ORTHO05D001429 3.9e-07 58.2 72 40.3
COL.COLO4_26488 Corchorus olitorius HOM05D000955 ORTHO05D001429 5.1e-07 57.8 81 34.6
Gohir.A06G018300 Gossypium hirsutum HOM05D000955 ORTHO05D001429 5.1e-07 57.8 85 34.1
Manes.18G036400 Manihot esculenta HOM05D000955 ORTHO05D001429 5.1e-07 57.8 85 34.1
Thecc.08G009300 Theobroma cacao HOM05D000955 ORTHO05D001429 5.1e-07 57.8 70 41.4
Atru.chr13.676 Acer truncatum HOM05D000955 ORTHO05D001429 6.6e-07 57.4 71 38.0
EL10Ac5g12897 Beta vulgaris HOM05D006501 ORTHO05D008241 6.6e-07 57.4 85 37.6
Cfa018535 Carpinus fangiana HOM05D000955 ORTHO05D001429 6.6e-07 57.4 73 39.7
CiPaw.15G060300 Carya illinoinensis HOM05D000955 ORTHO05D001429 6.6e-07 57.4 69 39.1
Sed0011985 Sechium edule HOM05D000955 ORTHO05D001429 6.6e-07 57.4 82 36.6
Sed0019635 Sechium edule HOM05D000955 ORTHO05D001429 6.6e-07 57.4 82 36.6
Sed0019916 Sechium edule HOM05D000955 ORTHO05D001429 6.6e-07 57.4 77 35.1
Sed0024187 Sechium edule HOM05D000955 ORTHO05D001429 6.6e-07 57.4 78 37.2
Atru.chr13.681 Acer truncatum HOM05D000955 ORTHO05D001429 8.7e-07 57.0 72 38.9
Actinidia22623 Actinidia chinensis HOM05D000955 ORTHO05D001429 8.7e-07 57.0 71 43.7
Ciclev10002898m.g Citrus clementina HOM05D000955 ORTHO05D001429 8.7e-07 57.0 82 34.1
Manes.05G173200 Manihot esculenta HOM05D000955 ORTHO05D001429 8.7e-07 57.0 79 35.4
Gohir.D06G016400 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.1e-06 56.6 72 37.5
Medtr1g019670 Medicago truncatula HOM05D000955 ORTHO05D001429 1.1e-06 56.6 84 31.0
TPR.G3750 Trifolium pratense HOM05D000955 ORTHO05D001429 1.1e-06 56.6 82 32.9
Atru.chr13.682 Acer truncatum HOM05D000955 ORTHO05D001429 1.5e-06 56.2 72 41.7
Ah.12g052380 Amaranthus hybridus HOM05D006501 ORTHO05D008241 1.5e-06 56.2 79 38.0
Cfa018536 Carpinus fangiana HOM05D000955 ORTHO05D001429 1.5e-06 56.2 72 41.7
COL.COLO4_17164 Corchorus olitorius HOM05D000955 ORTHO05D001429 1.5e-06 56.2 70 38.6
Gohir.D02G091700 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.5e-06 56.2 73 35.6
Gorai.005G102800 Gossypium raimondii HOM05D000955 ORTHO05D001429 1.5e-06 56.2 73 35.6
Sed0024453 Sechium edule HOM05D000955 ORTHO05D001429 1.5e-06 56.2 75 36.0
Atru.chr13.683 Acer truncatum HOM05D000955 ORTHO05D001429 1.9e-06 55.8 72 41.7
MELO3C026462.2 Cucumis melo HOM05D000955 ORTHO05D001429 1.9e-06 55.8 83 34.9
Manes.05G173400 Manihot esculenta HOM05D000955 ORTHO05D001429 1.9e-06 55.8 75 33.3
Sed0027202 Sechium edule HOM05D000955 ORTHO05D001429 1.9e-06 55.8 67 38.8
CiPaw.15G060000 Carya illinoinensis HOM05D000955 ORTHO05D001429 2.5e-06 55.5 73 35.6
Manes.05G173100 Manihot esculenta HOM05D000955 ORTHO05D001429 2.5e-06 55.5 88 37.5
Sed0014291 Sechium edule HOM05D000955 ORTHO05D001429 2.5e-06 55.5 63 39.7
Atru.chr13.660 Acer truncatum HOM05D000955 ORTHO05D001429 3.3e-06 55.1 79 32.9
Actinidia22622 Actinidia chinensis HOM05D000955 ORTHO05D001429 3.3e-06 55.1 69 40.6
Sc26g0000780 Simmondsia chinensis HOM05D000955 ORTHO05D001429 3.3e-06 55.1 70 38.6
Thecc.08G009700 Theobroma cacao HOM05D000955 ORTHO05D001429 4.3e-06 54.7 75 38.7
CiPaw.15G060200 Carya illinoinensis HOM05D000955 ORTHO05D001429 5.6e-06 54.3 69 37.7
COL.COLO4_26492 Corchorus olitorius HOM05D035470 ORTHO05D025176 5.6e-06 54.3 80 37.5
Hma1.2p1_0982F.1_g243960 Hydrangea macrophylla HOM05D000955 ORTHO05D001429 5.6e-06 54.3 75 36.0
Sed0010424 Sechium edule HOM05D000955 ORTHO05D001429 5.6e-06 54.3 86 32.6
COL.COLO4_26491 Corchorus olitorius HOM05D000955 ORTHO05D001429 7.3e-06 53.9 74 33.8
CsaV3_4G034250 Cucumis sativus L. HOM05D000955 ORTHO05D001429 7.3e-06 53.9 89 30.3
Nitab4.5_0001101g0050 Nicotiana tabacum HOM05D000955 ORTHO05D001429 7.3e-06 53.9 71 36.6
Sabra08G0058800 Salix brachista HOM05D000955 ORTHO05D001429 7.3e-06 53.9 58 43.1
Sed0004971 Sechium edule HOM05D000955 ORTHO05D001429 7.3e-06 53.9 82 34.1
Sed0019911 Sechium edule HOM05D000955 ORTHO05D001429 7.3e-06 53.9 71 35.2
Thecc.04G031700 Theobroma cacao HOM05D000955 ORTHO05D001429 7.3e-06 53.9 68 35.3
Thecc.08G009600 Theobroma cacao HOM05D000955 ORTHO05D001429 7.3e-06 53.9 86 32.6
Thecc.08G009800 Theobroma cacao HOM05D000955 ORTHO05D001429 7.3e-06 53.9 76 34.2
Cfa018543 Carpinus fangiana HOM05D000955 ORTHO05D001429 9.6e-06 53.5 78 35.9
COL.COLO4_26489 Corchorus olitorius HOM05D000955 ORTHO05D001429 9.6e-06 53.5 67 38.8
Gohir.A03G076800 Gossypium hirsutum HOM05D000955 ORTHO05D001429 9.6e-06 53.5 71 33.8
Gohir.D02G091500 Gossypium hirsutum HOM05D000955 ORTHO05D001429 9.6e-06 53.5 71 35.2
Gorai.005G102600 Gossypium raimondii HOM05D000955 ORTHO05D001429 9.6e-06 53.5 71 35.2
PGR031G2327 Punica granatum HOM05D000955 ORTHO05D001429 9.6e-06 53.5 71 36.6


User provided reference genes

Program Settings