Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 2.6e-89 332.0 168 100.0
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 1.1e-60 236.9 158 79.1
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 2.6e-36 156.0 110 67.3
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 3.3e-36 155.6 141 57.4
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 6.3e-35 151.4 147 55.8
TWI53G0585 Tripterygium wilfordii HOM05D007597 ORTHO05D009608 1.4e-34 150.2 160 56.2
Sed0011475 Sechium edule HOM05D007597 ORTHO05D009608 1.8e-34 149.8 149 67.8
Gohir.D04G186400 Gossypium hirsutum HOM05D007597 ORTHO05D009608 4.1e-34 148.7 117 68.4
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 5.3e-34 148.3 104 65.4
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 7.0e-34 147.9 140 60.7
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 1.6e-33 146.7 102 68.6
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 1.6e-33 146.7 101 70.3
Gorai.012G182800 Gossypium raimondii HOM05D007597 ORTHO05D009608 1.6e-33 146.7 140 62.1
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 1.6e-33 146.7 105 74.3
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 2.0e-33 146.4 141 53.9
FAN12G3867 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.0e-33 146.4 105 73.3
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 2.0e-33 146.4 105 70.5
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 2.7e-33 146.0 103 68.9
FAN17G0527 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.7e-33 146.0 104 75.0
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 2.7e-33 146.0 134 56.7
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 3.5e-33 145.6 163 53.4
AUR62034992 Chenopodium quinoa HOM05D007597 ORTHO05D009608 4.5e-33 145.2 100 70.0
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 4.5e-33 145.2 107 72.9
FAN22G0955 Fragaria x ananassa HOM05D007597 ORTHO05D009608 7.7e-33 144.4 105 73.3
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 1.0e-32 144.1 102 66.7
FvH4_4g33480 Fragaria vesca HOM05D007597 ORTHO05D009608 1.3e-32 143.7 105 72.4
RcHm_v2.0_Chr4g0442791 Rosa chinensis HOM05D007597 ORTHO05D009608 1.3e-32 143.7 105 73.3
Gohir.A04G143100 Gossypium hirsutum HOM05D007597 ORTHO05D009608 1.7e-32 143.3 138 60.9
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 1.7e-32 143.3 165 51.5
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 2.2e-32 142.9 103 66.0
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 2.2e-32 142.9 103 68.9
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 2.2e-32 142.9 103 65.0
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 2.9e-32 142.5 156 50.6
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 2.9e-32 142.5 103 66.0
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 2.9e-32 142.5 169 51.5
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 6.5e-32 141.4 103 61.2
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 2.5e-31 139.4 102 63.7
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 4.2e-31 138.7 102 65.7
PSO017G5208 Papaver somniferum HOM05D007597 ORTHO05D009608 7.2e-31 137.9 107 62.6
GSVIVG01011651001 Vitis vinifera HOM05D007597 ORTHO05D009608 7.2e-31 137.9 84 75.0
Thecc.02G293900 Theobroma cacao HOM05D007597 ORTHO05D009608 1.2e-30 137.1 84 72.6
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 4.7e-30 135.2 150 52.0
PGR142G2235 Punica granatum HOM05D007597 ORTHO05D009608 4.7e-30 135.2 189 46.0
Sp2g13210 Schrenkiella parvula HOM05D007597 ORTHO05D009608 6.1e-30 134.8 109 61.5
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 8.0e-30 134.4 106 63.2
Eucgr.G02097 Eucalyptus grandis HOM05D007597 ORTHO05D009608 8.0e-30 134.4 128 57.8
Glyma.02G085800 Glycine max HOM05D007597 ORTHO05D009608 8.0e-30 134.4 119 55.5
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 1.0e-29 134.0 151 53.0
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 1.0e-29 134.0 151 53.0
Peaxi162Scf00937g00322 Petunia axillaris HOM05D007597 ORTHO05D009608 1.0e-29 134.0 155 50.3
Prupe.1G334100 Prunus persica HOM05D007597 ORTHO05D009608 1.0e-29 134.0 84 70.2
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 1.4e-29 133.7 103 62.1
CSS0036739 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 1.8e-29 133.3 107 68.2
PSO478G0215 Papaver somniferum HOM05D007597 ORTHO05D009608 1.8e-29 133.3 107 60.7
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 1.8e-29 133.3 102 64.7
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 2.3e-29 132.9 110 66.4
MSTRG.13629 Avicennia marina HOM05D007597 ORTHO05D009608 3.0e-29 132.5 140 50.7
A06p44080 Brassica napus HOM05D007597 ORTHO05D009608 3.0e-29 132.5 102 63.7
BraA06t27282Z Brassica rapa HOM05D007597 ORTHO05D009608 3.0e-29 132.5 102 63.7
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 4.0e-29 132.1 146 49.3
BcaC06g34122 Brassica carinata HOM05D007597 ORTHO05D009608 5.2e-29 131.7 146 49.3
BolC7t43776H Brassica oleracea HOM05D007597 ORTHO05D009608 5.2e-29 131.7 146 49.3
SalBow2G2924 Salvia bowleyana HOM05D007597 ORTHO05D009608 5.2e-29 131.7 144 52.8
THA.LOC104824124 Tarenaya hassleriana HOM05D007597 ORTHO05D009608 1.5e-28 130.2 154 50.6
Thhalv10004999m.g Eutrema salsugineum HOM05D007597 ORTHO05D009608 2.6e-28 129.4 133 53.4
PGSC0003DMG400026859 Solanum tuberosum HOM05D007597 ORTHO05D009608 4.4e-28 128.6 162 50.6
BcaC06g31279 Brassica carinata HOM05D007597 ORTHO05D009608 9.8e-28 127.5 103 63.1
DCAR_030495 Daucus carota HOM05D007597 ORTHO05D009608 3.7e-27 125.6 139 51.8
Aa31LG2G8130 Aethionema arabicum HOM05D007597 ORTHO05D009608 1.4e-26 123.6 103 60.2
CARHR144330 Cardamine hirsuta HOM05D007597 ORTHO05D009608 3.1e-26 122.5 104 58.7
CANSAT01G1232 Cannabis sativa HOM05D007597 ORTHO05D009608 4.1e-26 122.1 105 61.9
AL5G10880 Arabidopsis lyrata HOM05D007597 ORTHO05D009608 7.0e-26 121.3 102 55.9
Oeu031613.1 Olea europaea HOM05D007597 ORTHO05D009608 1.6e-25 120.2 76 75.0
Migut.E00488 Erythranthe guttata HOM05D007597 ORTHO05D009608 2.7e-25 119.4 84 70.2
AT2G01755 Arabidopsis thaliana HOM05D007597 ORTHO05D009608 7.7e-25 117.9 103 56.3
Lj6P736T27 Lonicera japonica HOM05D007597 ORTHO05D009608 1.0e-24 117.5 76 75.0
Zm00001eb216220 Zea mays HOM05D007597 ORTHO05D009608 1.3e-24 117.1 121 50.4
Solyc03g006540.3 Solanum lycopersicum HOM05D007597 ORTHO05D009608 3.8e-24 115.5 79 69.6
CSS0009732 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 1.5e-23 113.6 76 69.7
ATR0118G012 Amborella trichopoda HOM05D007597 ORTHO05D009608 4.7e-22 108.6 110 51.8
Sopen03g002540 Solanum pennellii HOM05D007597 ORTHO05D009608 8.0e-22 107.8 65 78.5
Carub.0005s0071 Capsella rubella HOM05D007597 ORTHO05D009608 1.5e-20 103.6 78 62.8
Os03g0713200 Oryza sativa ssp. japonica HOM05D007597 ORTHO05D009608 7.5e-20 101.3 84 56.0
AagrBONN_evm.TU.Sc2ySwM_228.3100 Anthoceros agrestis HOM05D007597 ORTHO05D009608 8.6e-16 87.8 107 43.9
COL.COLO4_16605 Corchorus olitorius HOM05D007597 ORTHO05D009608 8.6e-16 87.8 46 87.0
CBR_g61471 Chara braunii HOM05D007597 ORTHO05D009608 4.3e-15 85.5 79 51.9
Pp3c16_25200 Physcomitrium patens HOM05D007597 ORTHO05D009608 8.0e-14 81.3 76 48.7
QL03p036112 Quercus lobata HOM05D007597 ORTHO05D009608 1.7e-11 73.6 65 67.7
FAN07G1480 Fragaria x ananassa HOM05D007597 ORTHO05D009608 1.8e-10 70.1 62 71.0
FAN07G2660 Fragaria x ananassa HOM05D007597 ORTHO05D009608 1.8e-10 70.1 62 71.0
TAR371G0144 Trochodendron aralioides HOM05D007597 ORTHO05D009608 2.4e-10 69.7 105 48.6
Nitab4.5_0006778g0040 Nicotiana tabacum HOM05D007597 ORTHO05D009608 2.3e-08 63.2 59 64.4
SMO115G0274 Selaginella moellendorffii HOM05D007597 ORTHO05D009608 3.0e-08 62.8 82 43.9
Glyma.07G171100 Glycine max HOM05D007597 ORTHO05D009608 1.9e-07 60.1 56 51.8
Manes.17G084450 Manihot esculenta HOM05D007597 ORTHO05D000073 1.2e-06 57.4 39 64.1


User provided reference genes

Program Settings