Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 1.4e-221 772.7 411 100.0
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 1.0e-142 510.8 380 76.1
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 2.9e-118 429.5 419 61.6
Sed0012704 Sechium edule HOM05D007962 ORTHO05D009990 2.8e-84 316.6 376 57.4
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 4.3e-45 186.4 455 40.4
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 1.0e-41 175.3 424 37.5
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 1.7e-41 174.5 450 39.3
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 2.9e-41 173.7 430 38.8
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 3.8e-41 173.3 423 37.1
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 2.7e-39 167.2 440 35.7
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 1.8e-38 164.5 436 37.4
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 5.1e-38 162.9 445 36.4
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 3.7e-36 156.8 440 34.3
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 1.8e-35 154.5 401 36.2
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 3.1e-35 153.7 394 36.5
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 2.6e-34 150.6 432 37.0
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 1.0e-33 148.7 418 36.1
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 6.5e-33 146.0 402 36.1
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 4.2e-32 143.3 396 37.6
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 9.4e-32 142.1 400 36.5
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 1.6e-31 141.4 469 33.5
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 2.1e-31 141.0 439 33.9
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 2.1e-31 141.0 456 33.3
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 3.6e-31 140.2 400 35.0
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.4e-30 138.3 397 36.3
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 2.3e-30 137.5 390 36.2
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 6.7e-30 136.0 391 36.3
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 8.8e-30 135.6 398 35.9
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 1.3e-28 131.7 426 31.9
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 1.1e-27 128.6 438 35.2
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 8.5e-25 119.0 387 35.1
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 7.2e-24 115.9 429 34.0
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 4.7e-23 113.2 407 32.2
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 5.1e-22 109.8 416 31.2
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 8.8e-22 109.0 364 34.9
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 1.1e-21 108.6 347 34.9
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 2.6e-21 107.5 447 30.6
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 5.7e-21 106.3 365 34.5
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 5.7e-21 106.3 383 33.4
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 7.4e-21 105.9 466 29.6
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 4.1e-19 100.1 394 34.0
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 9.1e-19 99.0 405 29.1
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 3.5e-18 97.1 422 32.0
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 6.5e-17 92.8 382 30.6
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 8.5e-17 92.4 408 28.2
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 1.9e-16 91.3 437 32.3
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 4.2e-16 90.1 395 31.9
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 4.2e-16 90.1 425 31.5
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 1.2e-15 88.6 378 31.0
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 3.6e-15 87.0 245 31.4
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 1.8e-14 84.7 239 31.8
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 3.0e-14 84.0 410 27.1
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 3.0e-14 84.0 437 30.2
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 4.4e-13 80.1 423 29.6
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 5.7e-13 79.7 463 27.6
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 8.2e-12 75.9 429 26.8
FvH4_3g21030 Fragaria vesca HOM05D007962 ORTHO05D009990 1.1e-11 75.5 265 35.5
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 1.8e-11 74.7 128 39.1
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 3.1e-11 73.9 437 30.0
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 3.1e-11 73.9 427 27.4
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 9.1e-11 72.4 363 29.8
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 5.9e-10 69.7 310 30.6
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 7.7e-10 69.3 448 24.8
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 1.7e-09 68.2 458 26.2
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 3.8e-09 67.0 427 28.1
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 1.5e-08 65.1 258 32.9
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 1.9e-08 64.7 266 30.8
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 1.2e-07 62.0 270 27.8
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 4.7e-07 60.1 258 32.2
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 8.0e-07 59.3 409 26.4


User provided reference genes

Program Settings