Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 2.9e-279 964.5 467 100.0
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 3.6e-274 947.6 467 97.9
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 4.8e-266 920.6 467 94.4
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 5.3e-225 784.3 469 79.3
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 5.0e-223 777.7 468 79.3
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 7.0e-217 757.3 467 77.5
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 2.7e-216 755.4 486 75.9
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 2.2e-215 752.3 468 76.5
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 5.0e-215 751.1 468 76.1
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 1.9e-214 749.2 468 75.9
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 1.9e-214 749.2 468 75.9
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 7.2e-214 747.3 471 75.2
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 2.1e-213 745.7 469 76.1
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 4.7e-213 744.6 471 77.1
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 6.1e-213 744.2 475 75.6
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 1.0e-212 743.4 467 75.8
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.8e-212 742.7 471 76.6
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 3.0e-212 741.9 462 75.3
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 1.5e-211 739.6 470 76.4
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 2.0e-211 739.2 470 74.7
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 4.4e-211 738.0 476 76.3
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 9.1e-209 730.3 459 74.9
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 2.9e-207 725.3 468 73.5
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 1.5e-206 723.0 458 74.5
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 9.5e-206 720.3 459 74.1
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 3.0e-204 715.3 461 73.3
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 4.0e-204 714.9 479 72.9
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 1.5e-203 713.0 431 77.3
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 2.0e-203 712.6 364 91.2
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 4.4e-203 711.4 475 71.6
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 8.0e-197 690.6 458 71.6
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 1.8e-196 689.5 463 71.3
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 2.3e-196 689.1 464 69.4
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 6.8e-196 687.6 430 73.7
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 1.5e-195 686.4 464 70.7
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 2.0e-195 686.0 470 70.0
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 5.8e-195 684.5 468 71.6
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 1.3e-194 683.3 459 71.0
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 2.2e-194 682.6 468 69.4
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 2.9e-194 682.2 468 71.6
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 1.1e-193 680.2 468 70.7
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 1.4e-193 679.9 468 71.2
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 4.1e-193 678.3 432 73.4
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 4.1e-193 678.3 467 69.8
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 3.5e-192 675.2 437 72.5
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 4.6e-192 674.9 440 71.4
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 7.8e-192 674.1 468 70.9
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 6.6e-191 671.0 462 69.9
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 8.6e-191 670.6 466 71.5
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 1.9e-190 669.5 459 70.4
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 2.5e-190 669.1 464 70.0
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 3.3e-190 668.7 468 69.4
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 9.5e-190 667.2 366 84.7
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 1.2e-189 666.8 449 70.8
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.2e-189 666.8 447 71.4
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 1.2e-189 666.8 459 70.2
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 4.7e-189 664.8 427 74.5
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 8.0e-189 664.1 426 71.8
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 8.0e-189 664.1 467 70.2
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 8.0e-189 664.1 461 69.6
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 2.3e-188 662.5 467 70.0
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 2.3e-188 662.5 467 70.0
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 8.9e-188 660.6 467 69.8
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 1.5e-187 659.8 466 69.5
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 2.0e-187 659.4 459 69.3
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 7.5e-187 657.5 501 64.3
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 2.9e-186 655.6 461 70.1
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 6.4e-186 654.4 461 69.0
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 8.3e-186 654.1 474 66.0
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 3.2e-185 652.1 458 69.4
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 1.6e-184 649.8 446 69.7
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 2.7e-184 649.0 444 67.3
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 1.7e-183 646.4 444 70.9
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 2.3e-183 646.0 475 66.9
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 8.6e-183 644.0 498 65.5
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 8.6e-183 644.0 461 67.9
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 8.6e-183 644.0 474 66.0
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 7.1e-177 624.4 387 73.1
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 2.1e-176 622.9 385 75.6
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 1.7e-175 619.8 451 66.7
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 1.1e-174 617.1 390 73.8
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 7.3e-174 614.4 394 73.6
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 1.1e-172 610.5 467 66.2
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 4.0e-172 608.6 431 66.1
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 3.4e-171 605.5 476 63.9
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 1.7e-170 603.2 449 64.6
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 2.1e-168 596.3 447 64.7
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 7.3e-166 587.8 451 63.6
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 1.7e-159 566.6 333 80.5
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 3.9e-159 565.5 457 60.4
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 1.1e-158 563.9 438 61.9
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 5.3e-156 555.1 476 56.7
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 6.9e-156 554.7 469 58.0
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 7.9e-144 514.6 446 57.4
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 5.8e-139 498.4 378 61.6
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 1.1e-132 477.6 464 54.7
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 1.4e-111 407.5 293 66.2
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 6.5e-106 388.7 212 84.9
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 7.0e-100 368.6 270 68.9
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 1.9e-97 360.5 226 77.4
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 7.2e-97 358.6 259 70.7
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 3.6e-96 356.3 383 45.7
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 2.3e-95 353.6 455 42.0
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 1.7e-90 337.4 457 40.7
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 1.2e-80 304.7 321 52.6
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 3.2e-68 263.5 272 49.6
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 1.2e-67 261.5 159 76.7
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 1.1e-63 248.4 154 77.3
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 3.0e-58 230.3 256 51.6
Nitab4.5_0004668g0030 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.1e-41 175.3 128 64.1
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 2.7e-35 154.1 130 61.5
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 1.3e-34 151.8 81 92.6
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 3.2e-28 130.6 133 53.4
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 1.8e-26 124.8 75 74.7
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 5.3e-23 113.2 67 74.6
RcHm_v2.0_Chr7g0220191 Rosa chinensis HOM05D006686 ORTHO05D008463 1.6e-19 101.7 107 57.0
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 1.1e-17 95.5 84 48.8
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 1.1e-17 95.5 89 55.1
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 1.9e-17 94.7 130 44.6


User provided reference genes

Program Settings